EY744817

Overview
NameEY744817
Unique NameEY744817
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1010
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_YEAS7 (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Saccharomyces cerevisiae (strain YJM789) GN=PRP5 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 7.487e-26
Identity = 71/158 (44.94%), Postives = 95/158 (60.13%), Query Frame = 3
Query:   33 LTPFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEIS-KAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ-PFLPPGNGPIVLVLAPTRELAVQIQQESTKF-GASSQIKSTCLYGG 494
            L PF+ NFY+ES +V++MS             I ++G   PKPV  +  +G     M  I+ K  F   TPIQ+Q  P  + GRD+IGI++TGSGKT++YLLP +  V AQ P      GP+ L+LAPTRELA+QI +E TKF  A + I+S C  GG
Sbjct:  211 LEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGG 368          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP11_SCHPO (Pre-mRNA-processing ATP-dependent RNA helicase prp11 OS=Schizosaccharomyces pombe GN=prp11 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 7.487e-26
Identity = 64/154 (41.56%), Postives = 86/154 (55.84%), Query Frame = 3
Query:   42 FEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500
            F+ +FYVE   +  +S             I + G D PKPV S+   G     +  I+  G+ +PT IQAQ  P    GRD+IG+A+TGSGKT+A+LLP   H+  Q  L  G GPI +++ PTRELAVQI +E   F     I++ C YGG P
Sbjct:  377 FKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAP 530          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_EMENI (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Emericella nidulans GN=prp5 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.779e-26
Identity = 67/171 (39.18%), Postives = 90/171 (52.63%), Query Frame = 3
Query:   12 RKLDLPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500
            +K D+P +        PF   FY E   +A MS             I V G DVPKPV+ +   G     +  I K GF   T IQAQ  P  + GRD+IG+A+TGSGKT+A+L+P   H+  Q  L    GPI L++ PTRELA QI ++   F  +  +++ C YGG P
Sbjct:  483 KKKDIPTVDHNKVEYEPFRRKFYTEPSDLAQMSEEEAANLRLELDGIKVRGLDVPKPVQKWSQCGLGIQTLDVIDKLGFASLTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAP 653          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_ASPTN (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=prp5 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.779e-26
Identity = 65/171 (38.01%), Postives = 91/171 (53.22%), Query Frame = 3
Query:   12 RKLDLPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500
            +K D+P +        PF   FY E   +A MS             I V G DVPKPV+ +   G     +  I + G+  PT IQ+Q  P  + GRD+IG+A+TGSGKT+A+L+P   H+  Q  L    GPI L++ PTRELA QI ++   F  +  +++ C YGG P
Sbjct:  491 KKKDIPKVDHAKMEYEPFRKKFYTEPSDLAQMSEGELASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIDRLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIPMFRHIKDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAP 661          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_ASPOR (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus oryzae GN=prp5 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.779e-26
Identity = 64/171 (37.43%), Postives = 91/171 (53.22%), Query Frame = 3
Query:   12 RKLDLPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500
            +K D+P +        PF   FY E   +AAMS             I V G +VP+PV  +   G     +  I + G+  PT IQAQ  P  + GRD+IG+A+TGSGKT+A+L+P   H+  Q  L    GP+ L++ PTRELA QI ++   F  +  +++ C YGG P
Sbjct:  496 KKKDIPTVDHKKVEYEPFRKKFYTEPSDLAAMSEEEAASLRLELDGIKVRGVEVPRPVSKWSQCGLGVQTLDVIDRLGYSAPTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPLENMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAP 666          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_ASPFU (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus fumigatus GN=prp5 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.779e-26
Identity = 65/171 (38.01%), Postives = 91/171 (53.22%), Query Frame = 3
Query:   12 RKLDLPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500
            +K D+P +        PF   FY E  ++A M+             I V G DVPKPV  +   G     +  I K G+  PT IQ+Q  P  + GRD+IG+A+TGSGKT+A+L+P   H+  Q  L    GPI L++ PTRELA QI ++   F  +  +++ C YGG P
Sbjct:  517 KKKDIPTVDHEKMEYEPFRKKFYTEPSNLAEMTDEEAASLRLELDGIKVRGVDVPKPVMKWSQCGLGVQTLDVIQKLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIRDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAP 687          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX53_HUMAN (Probable ATP-dependent RNA helicase DDX53 OS=Homo sapiens GN=DDX53 PE=1 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 9.779e-26
Identity = 68/168 (40.48%), Postives = 102/168 (60.71%), Query Frame = 3
Query:   21 DLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPD------VPKPVKSFRDV--GFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPF-LPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            DLPP+   + NFY+ES + + MS             IT +         +PKP   F+D    +PD +++ I + G  +PTPIQ+Q WP+ L+G DLI +A+TG+GKTL+YL+P  +H+++QP      NGP +LVL PTRELA+ ++ E +K+     +KS C+YGG
Sbjct:  170 DLPPV---KKNFYIESKATSCMSEMQVINWRKENFNITCDDLKSGEKRLIPKPTCRFKDAFQQYPD-LLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTRELALHVEAECSKYSYKG-LKSICIYGG 332          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_ASPCL (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus clavatus GN=prp5 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.277e-25
Identity = 64/171 (37.43%), Postives = 92/171 (53.80%), Query Frame = 3
Query:   12 RKLDLPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500
            +K D+P +        PF   FY E  ++A M+             I V G DVPKPV+ +   G     +  I + G+  PT IQ+Q  P  + GRD+IG+A+TGSGKT+A+L+P   H+  Q  L    GPI L++ PTRELA QI ++   F  +  +++ C YGG P
Sbjct:  499 KKKDIPTVNHEKVEYEPFRKKFYTEPSNLAQMTDEEAASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQALDVIERLGYESPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIPMFRHIKDQRPLDNMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAP 669          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_NEOFI (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=prp5 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.845e-25
Identity = 64/171 (37.43%), Postives = 91/171 (53.22%), Query Frame = 3
Query:   12 RKLDLPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500
            +K D+P +        PF   FY E  ++A M+             I V G DVPKPV  +   G     +  I + G+  PT IQ+Q  P  + GRD+IG+A+TGSGKT+A+L+P   H+  Q  L    GPI L++ PTRELA QI ++   F  +  +++ C YGG P
Sbjct:  499 KKKDIPAVDHEKMEYEPFRKKFYTEPSNLAEMTDEEAASLRLELDGIKVRGVDVPKPVMKWSQCGLGVQTLDVIHRLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIRDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAP 669          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_PICST (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Pichia stipitis GN=PRP5 PE=3 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 3.716e-25
Identity = 65/155 (41.94%), Postives = 87/155 (56.13%), Query Frame = 3
Query:   42 FEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEIS-KAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500
            F  NFY E   +   +             I V G +VP+PV  +  +G P   M  I  K  +  PT IQ+Q  P  + GRD+IG+A+TGSGKTL+++LP + H+  QP L  G GPI L+L+PTRELAVQI +E T F     + + C YGG P
Sbjct:  231 FRKNFYQEPSEIQNWTAEQVESIRLELDGIKVAGSNVPRPVLKWSHLGLPASYMNIIEDKLEYKAPTSIQSQALPAIMSGRDIIGVAKTGSGKTLSFVLPMLRHIQDQPDLKDGEGPIGLILSPTRELAVQIHKEITNFTKRLGMTACCCYGGSP 385          
The following BLAST results are available for this feature:
BLAST of EY744817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PRP5_YEAS77.487e-2644.94Pre-mRNA-processing ATP-dependent RNA helicase PRP... [more]
PRP11_SCHPO7.487e-2641.56Pre-mRNA-processing ATP-dependent RNA helicase prp... [more]
PRP5_EMENI9.779e-2639.18Pre-mRNA-processing ATP-dependent RNA helicase prp... [more]
PRP5_ASPTN9.779e-2638.01Pre-mRNA-processing ATP-dependent RNA helicase prp... [more]
PRP5_ASPOR9.779e-2637.43Pre-mRNA-processing ATP-dependent RNA helicase prp... [more]
PRP5_ASPFU9.779e-2638.01Pre-mRNA-processing ATP-dependent RNA helicase prp... [more]
DDX53_HUMAN9.779e-2640.48Probable ATP-dependent RNA helicase DDX53 OS=Homo ... [more]
PRP5_ASPCL1.277e-2537.43Pre-mRNA-processing ATP-dependent RNA helicase prp... [more]
PRP5_NEOFI2.845e-2537.43Pre-mRNA-processing ATP-dependent RNA helicase prp... [more]
PRP5_PICST3.716e-2541.94Pre-mRNA-processing ATP-dependent RNA helicase PRP... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-H06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744817 ID=EY744817; Name=EY744817; organism=Citrus sinensis; type=EST; length=1010bp
CCACGCGTCCGAGGAAGTTGGATTTGCCCCCTTTGACTCCTTTTGAGATG
AACTTCTATGTTGAGTCCCCCTCAGTGGCTGCAATGTCGGAGAGGGAAGT
CGAGGAGTATCGACAGCAGAGGGAAATCACAGTTGAAGGTCCCGATGTTC
CAAAACCTGTCAAGAGTTTCCGTGATGTCGGTTTTCCAGATTATGTTATG
CAAGAAATATCAAAAGCTGGCTTTTTTGAACCCACACCTATACAAGCTCA
GGGATGGCCAATGGCTTTGAAAGGTCGTGATCTCATTGGAATTGCTGAAA
CAGGCTCAGGAAAAACTCTGGCTTATCTCTTGCCTGCTATTGTCCATGTT
AATGCCCAGCCATTTTTACCTCCTGGAAATGGCCCAATTGTGCTAGTTCT
AGCTCCAACTCGTGAACTTGCTGTTCAAATACAACAAGAATCTACTAAAT
TTGGTGCATCCTCACAGATTAAAAGTACGTGCCTCTATGGGGGAGTTCCA
CAGGGAACTCCAGTTCCTGATCCGCCCAAGGGTGCCCCCAGTGCCCCCCC
CCCCCCCCCGAGGGTCCCGGCCCCGGCGGACGCCCCTAACGCCCATCCAC
CCAAGCGCCCCTTCCCTTTCCCCCCGCCCCCGCTAACCCGATGNTNCCAC
CCCCACCCCCCCGCCCGCCCGCCCGCGCCCGCCCCGCCCCNCGTCGGNTN
CCAGGGCGTGAAACTCATGCAGTCGCGCCCGAGCCATAGNTNTNNNGTGG
GTNANGTTNGTNTNTCCGGGGTCCCATTCCCCCGGCCACACCCCCCCCCA
CACAGCCCCCCCCTCCCCAGCCCCAACCCCCCCCCCCACCCCTCCGACTG
CCCCCCCCCCACCCCCCCACACCCCAACACCACCCAGCCCCCGCCCCCGG
ACCGCCCCCCAGACCCGCGAGCTCACCAGACCCGCGCCGCACGATCGAAC
CAGTGCCCGGATAACGCACACGGCGACCCACCGGCGAGCCGGGGCAGCAC
GACGAGGGGA
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