EY744817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_YEAS7 (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Saccharomyces cerevisiae (strain YJM789) GN=PRP5 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 7.487e-26 Identity = 71/158 (44.94%), Postives = 95/158 (60.13%), Query Frame = 3 Query: 33 LTPFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEIS-KAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ-PFLPPGNGPIVLVLAPTRELAVQIQQESTKF-GASSQIKSTCLYGG 494 L PF+ NFY+ES +V++MS I ++G PKPV + +G M I+ K F TPIQ+Q P + GRD+IGI++TGSGKT++YLLP + V AQ P GP+ L+LAPTRELA+QI +E TKF A + I+S C GG Sbjct: 211 LEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGG 368
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP11_SCHPO (Pre-mRNA-processing ATP-dependent RNA helicase prp11 OS=Schizosaccharomyces pombe GN=prp11 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 7.487e-26 Identity = 64/154 (41.56%), Postives = 86/154 (55.84%), Query Frame = 3 Query: 42 FEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500 F+ +FYVE + +S I + G D PKPV S+ G + I+ G+ +PT IQAQ P GRD+IG+A+TGSGKT+A+LLP H+ Q L G GPI +++ PTRELAVQI +E F I++ C YGG P Sbjct: 377 FKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAP 530
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_EMENI (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Emericella nidulans GN=prp5 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 9.779e-26 Identity = 67/171 (39.18%), Postives = 90/171 (52.63%), Query Frame = 3 Query: 12 RKLDLPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500 +K D+P + PF FY E +A MS I V G DVPKPV+ + G + I K GF T IQAQ P + GRD+IG+A+TGSGKT+A+L+P H+ Q L GPI L++ PTRELA QI ++ F + +++ C YGG P Sbjct: 483 KKKDIPTVDHNKVEYEPFRRKFYTEPSDLAQMSEEEAANLRLELDGIKVRGLDVPKPVQKWSQCGLGIQTLDVIDKLGFASLTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAP 653
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_ASPTN (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=prp5 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 9.779e-26 Identity = 65/171 (38.01%), Postives = 91/171 (53.22%), Query Frame = 3 Query: 12 RKLDLPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500 +K D+P + PF FY E +A MS I V G DVPKPV+ + G + I + G+ PT IQ+Q P + GRD+IG+A+TGSGKT+A+L+P H+ Q L GPI L++ PTRELA QI ++ F + +++ C YGG P Sbjct: 491 KKKDIPKVDHAKMEYEPFRKKFYTEPSDLAQMSEGELASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIDRLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIPMFRHIKDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAP 661
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_ASPOR (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus oryzae GN=prp5 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 9.779e-26 Identity = 64/171 (37.43%), Postives = 91/171 (53.22%), Query Frame = 3 Query: 12 RKLDLPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500 +K D+P + PF FY E +AAMS I V G +VP+PV + G + I + G+ PT IQAQ P + GRD+IG+A+TGSGKT+A+L+P H+ Q L GP+ L++ PTRELA QI ++ F + +++ C YGG P Sbjct: 496 KKKDIPTVDHKKVEYEPFRKKFYTEPSDLAAMSEEEAASLRLELDGIKVRGVEVPRPVSKWSQCGLGVQTLDVIDRLGYSAPTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPLENMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAP 666
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_ASPFU (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus fumigatus GN=prp5 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 9.779e-26 Identity = 65/171 (38.01%), Postives = 91/171 (53.22%), Query Frame = 3 Query: 12 RKLDLPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500 +K D+P + PF FY E ++A M+ I V G DVPKPV + G + I K G+ PT IQ+Q P + GRD+IG+A+TGSGKT+A+L+P H+ Q L GPI L++ PTRELA QI ++ F + +++ C YGG P Sbjct: 517 KKKDIPTVDHEKMEYEPFRKKFYTEPSNLAEMTDEEAASLRLELDGIKVRGVDVPKPVMKWSQCGLGVQTLDVIQKLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIRDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAP 687
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX53_HUMAN (Probable ATP-dependent RNA helicase DDX53 OS=Homo sapiens GN=DDX53 PE=1 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 9.779e-26 Identity = 68/168 (40.48%), Postives = 102/168 (60.71%), Query Frame = 3 Query: 21 DLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPD------VPKPVKSFRDV--GFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPF-LPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 DLPP+ + NFY+ES + + MS IT + +PKP F+D +PD +++ I + G +PTPIQ+Q WP+ L+G DLI +A+TG+GKTL+YL+P +H+++QP NGP +LVL PTRELA+ ++ E +K+ +KS C+YGG Sbjct: 170 DLPPV---KKNFYIESKATSCMSEMQVINWRKENFNITCDDLKSGEKRLIPKPTCRFKDAFQQYPD-LLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTRELALHVEAECSKYSYKG-LKSICIYGG 332
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_ASPCL (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus clavatus GN=prp5 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.277e-25 Identity = 64/171 (37.43%), Postives = 92/171 (53.80%), Query Frame = 3 Query: 12 RKLDLPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500 +K D+P + PF FY E ++A M+ I V G DVPKPV+ + G + I + G+ PT IQ+Q P + GRD+IG+A+TGSGKT+A+L+P H+ Q L GPI L++ PTRELA QI ++ F + +++ C YGG P Sbjct: 499 KKKDIPTVNHEKVEYEPFRKKFYTEPSNLAQMTDEEAASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQALDVIERLGYESPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIPMFRHIKDQRPLDNMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAP 669
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_NEOFI (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=prp5 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.845e-25 Identity = 64/171 (37.43%), Postives = 91/171 (53.22%), Query Frame = 3 Query: 12 RKLDLPPLT-------PFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500 +K D+P + PF FY E ++A M+ I V G DVPKPV + G + I + G+ PT IQ+Q P + GRD+IG+A+TGSGKT+A+L+P H+ Q L GPI L++ PTRELA QI ++ F + +++ C YGG P Sbjct: 499 KKKDIPAVDHEKMEYEPFRKKFYTEPSNLAEMTDEEAASLRLELDGIKVRGVDVPKPVMKWSQCGLGVQTLDVIHRLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIRDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAP 669
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_PICST (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Pichia stipitis GN=PRP5 PE=3 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 3.716e-25 Identity = 65/155 (41.94%), Postives = 87/155 (56.13%), Query Frame = 3 Query: 42 FEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEIS-KAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500 F NFY E + + I V G +VP+PV + +G P M I K + PT IQ+Q P + GRD+IG+A+TGSGKTL+++LP + H+ QP L G GPI L+L+PTRELAVQI +E T F + + C YGG P Sbjct: 231 FRKNFYQEPSEIQNWTAEQVESIRLELDGIKVAGSNVPRPVLKWSHLGLPASYMNIIEDKLEYKAPTSIQSQALPAIMSGRDIIGVAKTGSGKTLSFVLPMLRHIQDQPDLKDGEGPIGLILSPTRELAVQIHKEITNFTKRLGMTACCCYGGSP 385 The following BLAST results are available for this feature:
BLAST of EY744817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744817 ID=EY744817; Name=EY744817; organism=Citrus sinensis; type=EST; length=1010bpback to top |