EY744817

Overview
NameEY744817
Unique NameEY744817
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1010
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_CRYNE (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus neoformans GN=PRP5 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.716e-25
Identity = 69/171 (40.35%), Postives = 90/171 (52.63%), Query Frame = 3
Query:    6 RPRKLDLPP-------LTPFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            + RK DLPP         PF   FYV    V  M              I + G D PKPV+++   G P   +  I   G+  PT IQAQ  P  + GRD+IGIA+TGSGKT+A+LLP + HV  Q  +    GPI +V++PTRELA QI +E   F     I+++C  GG
Sbjct:  343 KSRKKDLPPPDHSKIDYEPFRKAFYVPPVEVLEMDEEEAELVRLEMDGIKIRGQDAPKPVRNWGAFGLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGG 513          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_MAGGR (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Magnaporthe grisea GN=PRP5 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.338e-25
Identity = 64/163 (39.26%), Postives = 94/163 (57.67%), Query Frame = 3
Query:   15 KLDLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500
            KLD+ P+     NF+VE   ++ M+             I V G DVPKPV+ +   G    ++  I+K  + +PT IQ Q  P+ + GRD++G+A+TGSGKT+A+LLP   H+  Q  +    GPI L+L PTRELAVQI ++   F  +  +++ C YGG P
Sbjct:  331 KLDIVPV---RKNFWVEPYELSEMTEAEVAELRLELDGIKVSGKDVPKPVQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTGSGKTMAFLLPMFRHIKDQEPVKDNEGPIGLILTPTRELAVQIFRDCKPFLKTLGLRAVCAYGGPP 490          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_KLULA (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Kluyveromyces lactis GN=PRP5 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 8.278e-25
Identity = 63/125 (50.40%), Postives = 79/125 (63.20%), Query Frame = 3
Query:  126 ITVEGPDVPKPVKSFRDVGFPDYVMQEIS-KAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPG-NGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            I + G D PKPV  +  +G    +M  IS +  F   TPIQ Q  P  + GRD+IGI++TGSGKT+A+LLP +  + AQP L P   GPI L+L PTRELAVQIQ+E+ KF   S I S C  GG
Sbjct:  233 IKISGKDCPKPVTKWSQLGLSSEIMDLISNELQFVTLTPIQCQAIPAIMSGRDVIGISKTGSGKTVAFLLPLVRQIKAQPPLAPDETGPIGLILTPTRELAVQIQEEALKFCKGSGISSICCVGG 357          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_ASPNC (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=prp5 PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.081e-24
Identity = 61/154 (39.61%), Postives = 84/154 (54.55%), Query Frame = 3
Query:   42 FEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500
            F   FY E   +A MS             I V G DVPKPV+ +   G     +  I K G+ + T IQAQ  P  + GRD+IG+A+TGSGKT+A+L+P   H+  Q  L    GP+ L++ PTRELA QI ++   F  +  +++ C YGG P
Sbjct:  506 FRKKFYTEPSDLAQMSDEEAASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIDKLGYEKTTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPLDNMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAP 659          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_NEUCR (Pre-mRNA-processing ATP-dependent RNA helicase prp-5 OS=Neurospora crassa GN=prp-5 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.366e-24
Identity = 61/172 (35.47%), Postives = 92/172 (53.49%), Query Frame = 3
Query:    3 TRPRKLDLPP-------LTPFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            ++ +K D+P        L P   NF+VE   ++ MS             I V G ++PKPV+ +   G    ++  I   GF +PTPIQ Q  P+ + GRD+IG+A+TGSGKT+A+ LP + HV  Q  +   +G I L++ PTREL  QI  +   F  + +++    YGG
Sbjct:  500 SKKKKKDIPTIDYSKLDLNPIRKNFWVEPYELSHMSEEELAELRLELDGIKVSGKNIPKPVQKWSQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKTGSGKTMAFALPMLRHVKDQDPVTGDDGAIALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYGG 671          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_DEBHA (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Debaryomyces hansenii GN=PRP5 PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 9.153e-24
Identity = 58/154 (37.66%), Postives = 86/154 (55.84%), Query Frame = 3
Query:   39 PFEMNFYVESPSVAAM-SXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEIS-KAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            PF  +FY E   ++ +              I V G +  +P+  +  +G P  +M  I  +  +  P+ IQAQ  P  + GRD+IG+A+TGSGKTL+++LP + H+  QP L  G+GPI L++ PTRELA+QI +E   F     I S C +GG
Sbjct:  274 PFRKDFYTEPTEISKLPEEEVANLRLKLDGIKVRGVNCTRPIIRWSQLGLPSTIMSIIEGRLNYSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLPLLRHIQDQPPLKKGDGPIGLIMTPTRELALQIHKELNHFTKKLNISSCCCFGG 427          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH43_ARATH (Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis thaliana GN=RH43 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.663e-23
Identity = 59/133 (44.36%), Postives = 80/133 (60.15%), Query Frame = 3
Query:  126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPP---GNGPIVLVLAPTRELAVQIQQESTKFGAS------SQIKSTCLYGGV 497
            ITV G D+P P+K+F D+ FP  +++ +   G   PTPIQ QG P+ L GRD+IGIA TGSGKTL ++LP I+    +  + P   G GPI LV+ P+RELA Q      +F AS       +++S    GGV
Sbjct:   85 ITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGV 217          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_CANAL (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Candida albicans GN=PRP5 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.748e-23
Identity = 62/154 (40.26%), Postives = 90/154 (58.44%), Query Frame = 3
Query:   42 FEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEI-SKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKF-GASSQIKSTCLYGG 494
            F   FY E+  ++A+S             I V+G DVP+P+  +  +  P  +   I  K  F +P+ IQ+Q  P  L GRD+IGIA+TGSGKTL+Y+LP + H+  Q F     GPI L+L+PTRELA+QI++E   F   ++ ++  C YGG
Sbjct:  252 FRKVFYREAYELSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQQFSKDNQGPIGLILSPTRELALQIEKEILNFTKRNNNLRVCCCYGG 405          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP28_PHANO (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Phaeosphaeria nodorum GN=PRP28 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.012e-22
Identity = 53/126 (42.06%), Postives = 82/126 (65.08%), Query Frame = 3
Query:  126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGN---GPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494
            I  +G  +P P++++++ G PD V++ +   G+ EP+ +Q    P+AL+ RDLIG+A TGSGKT +++LP +V+++  P L P N   GP  +VLAPTRELA QI+ E+ KF A     +  + GG
Sbjct:  315 IATKGGAIPNPMRNWQESGLPDKVLRLVEHVGYAEPSAVQRAAIPIALQCRDLIGVAVTGSGKTASFVLPLLVYISQLPPLGPSNRADGPYAIVLAPTRELAQQIEVETRKFAAPLGFNTAVIVGG 440          
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX59_RAT (Probable ATP-dependent RNA helicase DDX59 OS=Rattus norvegicus GN=Ddx59 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.012e-22
Identity = 60/158 (37.97%), Postives = 90/158 (56.96%), Query Frame = 3
Query:   30 PLTPFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTK-FGASSQIKSTCLYGGVP 500
            PL  F +  Y E P + A+             I+V+G +V +P+  F   GFP+ + Q + K+G+  PTPIQ Q  P+ L GRD++  A+TGSGKT A+LLP I+       LP    P  L+L PTRELA+QI++++ +      ++K+  L GG+P
Sbjct:  161 PLDAFYV--YKEHPFIVALRDDQIETLKQQLGISVQGQEVARPIIDFEHCGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIIRA-----LPEDKTPSALILTPTRELAIQIERQAKELMRGLPRMKTVLLVGGLP 311          
The following BLAST results are available for this feature:
BLAST of EY744817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PRP5_CRYNE3.716e-2540.35Pre-mRNA-processing ATP-dependent RNA helicase PRP... [more]
PRP5_MAGGR6.338e-2539.26Pre-mRNA-processing ATP-dependent RNA helicase PRP... [more]
PRP5_KLULA8.278e-2550.40Pre-mRNA-processing ATP-dependent RNA helicase PRP... [more]
PRP5_ASPNC1.081e-2439.61Pre-mRNA-processing ATP-dependent RNA helicase prp... [more]
PRP5_NEUCR5.366e-2435.47Pre-mRNA-processing ATP-dependent RNA helicase prp... [more]
PRP5_DEBHA9.153e-2437.66Pre-mRNA-processing ATP-dependent RNA helicase PRP... [more]
RH43_ARATH2.663e-2344.36Putative DEAD-box ATP-dependent RNA helicase 43 OS... [more]
PRP5_CANAL7.748e-2340.26Pre-mRNA-processing ATP-dependent RNA helicase PRP... [more]
PRP28_PHANO1.012e-2242.06Pre-mRNA-splicing ATP-dependent RNA helicase PRP28... [more]
DDX59_RAT1.012e-2237.97Probable ATP-dependent RNA helicase DDX59 OS=Rattu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-H06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744817 ID=EY744817; Name=EY744817; organism=Citrus sinensis; type=EST; length=1010bp
CCACGCGTCCGAGGAAGTTGGATTTGCCCCCTTTGACTCCTTTTGAGATG
AACTTCTATGTTGAGTCCCCCTCAGTGGCTGCAATGTCGGAGAGGGAAGT
CGAGGAGTATCGACAGCAGAGGGAAATCACAGTTGAAGGTCCCGATGTTC
CAAAACCTGTCAAGAGTTTCCGTGATGTCGGTTTTCCAGATTATGTTATG
CAAGAAATATCAAAAGCTGGCTTTTTTGAACCCACACCTATACAAGCTCA
GGGATGGCCAATGGCTTTGAAAGGTCGTGATCTCATTGGAATTGCTGAAA
CAGGCTCAGGAAAAACTCTGGCTTATCTCTTGCCTGCTATTGTCCATGTT
AATGCCCAGCCATTTTTACCTCCTGGAAATGGCCCAATTGTGCTAGTTCT
AGCTCCAACTCGTGAACTTGCTGTTCAAATACAACAAGAATCTACTAAAT
TTGGTGCATCCTCACAGATTAAAAGTACGTGCCTCTATGGGGGAGTTCCA
CAGGGAACTCCAGTTCCTGATCCGCCCAAGGGTGCCCCCAGTGCCCCCCC
CCCCCCCCCGAGGGTCCCGGCCCCGGCGGACGCCCCTAACGCCCATCCAC
CCAAGCGCCCCTTCCCTTTCCCCCCGCCCCCGCTAACCCGATGNTNCCAC
CCCCACCCCCCCGCCCGCCCGCCCGCGCCCGCCCCGCCCCNCGTCGGNTN
CCAGGGCGTGAAACTCATGCAGTCGCGCCCGAGCCATAGNTNTNNNGTGG
GTNANGTTNGTNTNTCCGGGGTCCCATTCCCCCGGCCACACCCCCCCCCA
CACAGCCCCCCCCTCCCCAGCCCCAACCCCCCCCCCCACCCCTCCGACTG
CCCCCCCCCCACCCCCCCACACCCCAACACCACCCAGCCCCCGCCCCCGG
ACCGCCCCCCAGACCCGCGAGCTCACCAGACCCGCGCCGCACGATCGAAC
CAGTGCCCGGATAACGCACACGGCGACCCACCGGCGAGCCGGGGCAGCAC
GACGAGGGGA
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