EY744817
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_CRYNE (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus neoformans GN=PRP5 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.716e-25 Identity = 69/171 (40.35%), Postives = 90/171 (52.63%), Query Frame = 3 Query: 6 RPRKLDLPP-------LTPFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 + RK DLPP PF FYV V M I + G D PKPV+++ G P + I G+ PT IQAQ P + GRD+IGIA+TGSGKT+A+LLP + HV Q + GPI +V++PTRELA QI +E F I+++C GG Sbjct: 343 KSRKKDLPPPDHSKIDYEPFRKAFYVPPVEVLEMDEEEAELVRLEMDGIKIRGQDAPKPVRNWGAFGLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGG 513
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_MAGGR (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Magnaporthe grisea GN=PRP5 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 6.338e-25 Identity = 64/163 (39.26%), Postives = 94/163 (57.67%), Query Frame = 3 Query: 15 KLDLPPLTPFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500 KLD+ P+ NF+VE ++ M+ I V G DVPKPV+ + G ++ I+K + +PT IQ Q P+ + GRD++G+A+TGSGKT+A+LLP H+ Q + GPI L+L PTRELAVQI ++ F + +++ C YGG P Sbjct: 331 KLDIVPV---RKNFWVEPYELSEMTEAEVAELRLELDGIKVSGKDVPKPVQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTGSGKTMAFLLPMFRHIKDQEPVKDNEGPIGLILTPTRELAVQIFRDCKPFLKTLGLRAVCAYGGPP 490
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_KLULA (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Kluyveromyces lactis GN=PRP5 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 8.278e-25 Identity = 63/125 (50.40%), Postives = 79/125 (63.20%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVGFPDYVMQEIS-KAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPG-NGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 I + G D PKPV + +G +M IS + F TPIQ Q P + GRD+IGI++TGSGKT+A+LLP + + AQP L P GPI L+L PTRELAVQIQ+E+ KF S I S C GG Sbjct: 233 IKISGKDCPKPVTKWSQLGLSSEIMDLISNELQFVTLTPIQCQAIPAIMSGRDVIGISKTGSGKTVAFLLPLVRQIKAQPPLAPDETGPIGLILTPTRELAVQIQEEALKFCKGSGISSICCVGG 357
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_ASPNC (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=prp5 PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 1.081e-24 Identity = 61/154 (39.61%), Postives = 84/154 (54.55%), Query Frame = 3 Query: 42 FEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGGVP 500 F FY E +A MS I V G DVPKPV+ + G + I K G+ + T IQAQ P + GRD+IG+A+TGSGKT+A+L+P H+ Q L GP+ L++ PTRELA QI ++ F + +++ C YGG P Sbjct: 506 FRKKFYTEPSDLAQMSDEEAASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIDKLGYEKTTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPLDNMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAP 659
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_NEUCR (Pre-mRNA-processing ATP-dependent RNA helicase prp-5 OS=Neurospora crassa GN=prp-5 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 5.366e-24 Identity = 61/172 (35.47%), Postives = 92/172 (53.49%), Query Frame = 3 Query: 3 TRPRKLDLPP-------LTPFEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 ++ +K D+P L P NF+VE ++ MS I V G ++PKPV+ + G ++ I GF +PTPIQ Q P+ + GRD+IG+A+TGSGKT+A+ LP + HV Q + +G I L++ PTREL QI + F + +++ YGG Sbjct: 500 SKKKKKDIPTIDYSKLDLNPIRKNFWVEPYELSHMSEEELAELRLELDGIKVSGKNIPKPVQKWSQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKTGSGKTMAFALPMLRHVKDQDPVTGDDGAIALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYGG 671
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_DEBHA (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Debaryomyces hansenii GN=PRP5 PE=3 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 9.153e-24 Identity = 58/154 (37.66%), Postives = 86/154 (55.84%), Query Frame = 3 Query: 39 PFEMNFYVESPSVAAM-SXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEIS-KAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 PF +FY E ++ + I V G + +P+ + +G P +M I + + P+ IQAQ P + GRD+IG+A+TGSGKTL+++LP + H+ QP L G+GPI L++ PTRELA+QI +E F I S C +GG Sbjct: 274 PFRKDFYTEPTEISKLPEEEVANLRLKLDGIKVRGVNCTRPIIRWSQLGLPSTIMSIIEGRLNYSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLPLLRHIQDQPPLKKGDGPIGLIMTPTRELALQIHKELNHFTKKLNISSCCCFGG 427
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: RH43_ARATH (Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis thaliana GN=RH43 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.663e-23 Identity = 59/133 (44.36%), Postives = 80/133 (60.15%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPP---GNGPIVLVLAPTRELAVQIQQESTKFGAS------SQIKSTCLYGGV 497 ITV G D+P P+K+F D+ FP +++ + G PTPIQ QG P+ L GRD+IGIA TGSGKTL ++LP I+ + + P G GPI LV+ P+RELA Q +F AS +++S GGV Sbjct: 85 ITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGV 217
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP5_CANAL (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Candida albicans GN=PRP5 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 7.748e-23 Identity = 62/154 (40.26%), Postives = 90/154 (58.44%), Query Frame = 3 Query: 42 FEMNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGPDVPKPVKSFRDVGFPDYVMQEI-SKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTKF-GASSQIKSTCLYGG 494 F FY E+ ++A+S I V+G DVP+P+ + + P + I K F +P+ IQ+Q P L GRD+IGIA+TGSGKTL+Y+LP + H+ Q F GPI L+L+PTRELA+QI++E F ++ ++ C YGG Sbjct: 252 FRKVFYREAYELSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQQFSKDNQGPIGLILSPTRELALQIEKEILNFTKRNNNLRVCCCYGG 405
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: PRP28_PHANO (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Phaeosphaeria nodorum GN=PRP28 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.012e-22 Identity = 53/126 (42.06%), Postives = 82/126 (65.08%), Query Frame = 3 Query: 126 ITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGN---GPIVLVLAPTRELAVQIQQESTKFGASSQIKSTCLYGG 494 I +G +P P++++++ G PD V++ + G+ EP+ +Q P+AL+ RDLIG+A TGSGKT +++LP +V+++ P L P N GP +VLAPTRELA QI+ E+ KF A + + GG Sbjct: 315 IATKGGAIPNPMRNWQESGLPDKVLRLVEHVGYAEPSAVQRAAIPIALQCRDLIGVAVTGSGKTASFVLPLLVYISQLPPLGPSNRADGPYAIVLAPTRELAQQIEVETRKFAAPLGFNTAVIVGG 440
BLAST of EY744817 vs. ExPASy Swiss-Prot
Match: DDX59_RAT (Probable ATP-dependent RNA helicase DDX59 OS=Rattus norvegicus GN=Ddx59 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.012e-22 Identity = 60/158 (37.97%), Postives = 90/158 (56.96%), Query Frame = 3 Query: 30 PLTPFEMNFYVESPSVAAMSXXXXXXXXXXXXITVEGPDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLPPGNGPIVLVLAPTRELAVQIQQESTK-FGASSQIKSTCLYGGVP 500 PL F + Y E P + A+ I+V+G +V +P+ F GFP+ + Q + K+G+ PTPIQ Q P+ L GRD++ A+TGSGKT A+LLP I+ LP P L+L PTRELA+QI++++ + ++K+ L GG+P Sbjct: 161 PLDAFYV--YKEHPFIVALRDDQIETLKQQLGISVQGQEVARPIIDFEHCGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIIRA-----LPEDKTPSALILTPTRELAIQIERQAKELMRGLPRMKTVLLVGGLP 311 The following BLAST results are available for this feature:
BLAST of EY744817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744817 ID=EY744817; Name=EY744817; organism=Citrus sinensis; type=EST; length=1010bpback to top |