EY744810

Overview
NameEY744810
Unique NameEY744810
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_PARL1 (Ribose-5-phosphate isomerase A OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rpiA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.404e-33
Identity = 77/144 (53.47%), Postives = 100/144 (69.44%), Query Frame = 3
Query:  207 LTQDDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPVEGVNF 638
            +  DD KK AA +A+++VK GM LG+GTGSTA   V  +G+ +K G   DIVG+PTS+RT + A SL IPLT LDD P LD+ +DGADE+D +L L+KG GGALL+EK+V  AS   +V+ D SKLV  LG     +PVE + F
Sbjct:    1 MNADDQKKAAAVRALEFVKPGMKLGMGTGSTAEHFVRALGEKVKAG--LDIVGVPTSERTAKLAASLGIPLTNLDDTPHLDITVDGADELDGKLRLIKGGGGALLREKIVATASDRMIVIADASKLVKTLG--SFPLPVEVIPF 140          
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_CHLSY (Ribose-5-phosphate isomerase A OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=rpiA PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.128e-33
Identity = 73/141 (51.77%), Postives = 101/141 (71.63%), Query Frame = 3
Query:  225 KKLAADKAVDYVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPVEGVNFCWK 647
            K +AA  AV  V+ GM +GLG GSTAA+    I + L  G+L DIVG+P ++ T + A+ L IPLTTLD+  ++DL IDGADEVDP+L+L+KG GGALL+EKMV  AS+   ++ D+SKL   L G++ A+P+E V+F W+
Sbjct:   10 KAMAAAAAVALVRPGMVIGLGFGSTAAYATRMIAERLHQGDLNDIVGVPCAEGTAQLARELGIPLTTLDEVAAVDLTIDGADEVDPQLSLIKGGGGALLREKMVAQASRRVAIIVDDSKLSPAL-GTRFALPLEVVDFGWR 149          
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_CHLAA (Ribose-5-phosphate isomerase A OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=rpiA PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.128e-33
Identity = 73/141 (51.77%), Postives = 101/141 (71.63%), Query Frame = 3
Query:  225 KKLAADKAVDYVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPVEGVNFCWK 647
            K +AA  AV  V+ GM +GLG GSTAA+    I + L  G+L DIVG+P ++ T + A+ L IPLTTLD+  ++DL IDGADEVDP+L+L+KG GGALL+EKMV  AS+   ++ D+SKL   L G++ A+P+E V+F W+
Sbjct:   10 KAMAAAAAVALVRPGMVIGLGFGSTAAYATRMIAERLHQGDLNDIVGVPCAEGTAQLARELGIPLTTLDEVAAVDLTIDGADEVDPQLSLIKGGGGALLREKMVAQASRRVAIIVDDSKLSPAL-GTRFALPLEVVDFGWR 149          
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_BACCR (Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rpiA PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.128e-33
Identity = 73/152 (48.03%), Postives = 103/152 (67.76%), Query Frame = 3
Query:  219 DLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPVEGVNFCWKFNLGKVQKL 674
            +LK+LA + A ++V  GM +GLGTGST  + + ++G+ +K G       +PTSK TE  A+ LNIPL +L+D  SLDL IDGADE+D  L L+KG GGALL+EK+V ++SK  +++ DESKLV+ LG     +P+E + F WK    K+Q L
Sbjct:    2 NLKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGERVKEG--LSFQAVPTSKETEALAQQLNIPLISLNDVQSLDLTIDGADEIDSNLQLIKGGGGALLREKIVASSSKKLIIIADESKLVTHLG--TFPLPIEIIPFSWKQTENKIQSL 149          
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_CHLAD (Ribose-5-phosphate isomerase A OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=rpiA PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.336e-33
Identity = 74/144 (51.39%), Postives = 101/144 (70.14%), Query Frame = 3
Query:  216 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPVEGVNFCWK 647
            + LK +AA  AV  ++ GM +GLG GSTAA+    IG+ L  GELR+IVG+P ++ T   A+ L IPLTTLDD   +D+ IDGADEVDP + L+KG GGALL+EKMV  AS+   ++ DESKL   L G++ A+P+E V+F ++
Sbjct:    5 ETLKAMAAAAAVALIQPGMVIGLGFGSTAAYATRMIGERLANGELREIVGVPCAEGTAALARELGIPLTTLDDVERVDITIDGADEVDPYMALIKGGGGALLREKMVAQASRRVAIIVDESKLSPAL-GTRFALPIEVVDFGYR 147          
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_STRA5 (Ribose-5-phosphate isomerase A OS=Streptococcus agalactiae serotype V GN=rpiA PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.648e-32
Identity = 77/141 (54.61%), Postives = 98/141 (69.50%), Query Frame = 3
Query:  216 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPVEGVNF 638
            D+LKKLA   A  YVK+GM +GLGTGSTA F V+ IG+ +K   L+ +VG+ TS RT EQA+ L IPL + DD   +D+ +DGADEVDP+ N +KG GGALL EK+V   +K ++ V DESKLV  LG  KL  PVE V +
Sbjct:    2 DELKKLAGVTAAKYVKNGMIVGLGTGSTAYFFVEEIGRRVKEEGLQ-VVGVTTSNRTTEQARGLGIPLKSADDIDVIDVTVDGADEVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDESKLVETLGAFKL--PVEVVRY 139          
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_STRA3 (Ribose-5-phosphate isomerase A OS=Streptococcus agalactiae serotype III GN=rpiA PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.648e-32
Identity = 77/141 (54.61%), Postives = 98/141 (69.50%), Query Frame = 3
Query:  216 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPVEGVNF 638
            D+LKKLA   A  YVK+GM +GLGTGSTA F V+ IG+ +K   L+ +VG+ TS RT EQA+ L IPL + DD   +D+ +DGADEVDP+ N +KG GGALL EK+V   +K ++ V DESKLV  LG  KL  PVE V +
Sbjct:    2 DELKKLAGVTAAKYVKNGMIVGLGTGSTAYFFVEEIGRRVKEEGLQ-VVGVTTSNRTTEQARGLGIPLKSADDIDVIDVTVDGADEVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDESKLVETLGAFKL--PVEVVRY 139          
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_STRA1 (Ribose-5-phosphate isomerase A OS=Streptococcus agalactiae serotype Ia GN=rpiA PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.517e-32
Identity = 77/141 (54.61%), Postives = 98/141 (69.50%), Query Frame = 3
Query:  216 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPVEGVNF 638
            D+LKKLA   A  YVK+GM +GLGTGSTA F V+ IG+ +K   L+ +VG+ TS RT EQA+ L IPL + DD   +D+ +DGADEVDP+ N +KG GGALL EK+V   +K ++ V DESKLV  LG  KL  PVE V +
Sbjct:    2 DELKKLAGVTAAKYVKNGMIVGLGTGSTAYFFVEEIGRRVKEEGLQ-VVGVTTSNRTTEQARGLAIPLKSADDIDVIDVTVDGADEVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDESKLVETLGAFKL--PVEVVRY 139          
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_THEEB (Ribose-5-phosphate isomerase A OS=Thermosynechococcus elongatus (strain BP-1) GN=rpiA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.006e-31
Identity = 74/139 (53.24%), Postives = 96/139 (69.06%), Query Frame = 3
Query:  222 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPVEGVNF 638
            +K++ A  A D V+SGM +GLGTGST AFV+  +G  L+ GEL +IVG+PTS +    AK   IPL TLDD   LD+AIDGADEVDP  NL+KG G A  +EK+V++ ++ F+VV D SKLV  L GS   +PVE + F
Sbjct:    9 MKQVVAKAAADRVQSGMVVGLGTGSTTAFVIQFLGDRLRKGELSNIVGVPTSFQASVLAKKYGIPLVTLDDVEKLDIAIDGADEVDPAKNLIKGGGAAHTREKIVDSLAEQFLVVVDSSKLVQKL-GSTFPVPVEVLPF 146          
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_TRIEI (Ribose-5-phosphate isomerase A OS=Trichodesmium erythraeum (strain IMS101) GN=rpiA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.314e-31
Identity = 73/151 (48.34%), Postives = 102/151 (67.55%), Query Frame = 3
Query:  222 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPVEGVNFCWKFNLGKVQKL 674
            +K+     A + VKSGM +GLGTGST A+++  +G+LL+ GEL+DI GIPTS ++   AK   +PLTTLD+   +D+AIDGADEVDP+ NL+KG G A  +EK+V+  ++ FVVV D SKLV  L GS   +PVE +       +  ++KL
Sbjct:   11 MKQQVGKAAAEEVKSGMIVGLGTGSTTAYMIQFLGELLQRGELKDIKGIPTSFQSTVLAKKYGVPLTTLDEVDYMDIAIDGADEVDPQKNLIKGGGAAHTREKIVDCLAEKFVVVVDSSKLVDKL-GSTFLLPVEVIPMAMNPVIRAIEKL 160          
The following BLAST results are available for this feature:
BLAST of EY744810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 458
Match NameE-valueIdentityDescription
RPIA_PARL11.404e-3353.47Ribose-5-phosphate isomerase A OS=Parvibaculum lav... [more]
RPIA_CHLSY3.128e-3351.77Ribose-5-phosphate isomerase A OS=Chloroflexus aur... [more]
RPIA_CHLAA3.128e-3351.77Ribose-5-phosphate isomerase A OS=Chloroflexus aur... [more]
RPIA_BACCR3.128e-3348.03Ribose-5-phosphate isomerase A OS=Bacillus cereus ... [more]
RPIA_CHLAD5.336e-3351.39Ribose-5-phosphate isomerase A OS=Chloroflexus agg... [more]
RPIA_STRA52.648e-3254.61Ribose-5-phosphate isomerase A OS=Streptococcus ag... [more]
RPIA_STRA32.648e-3254.61Ribose-5-phosphate isomerase A OS=Streptococcus ag... [more]
RPIA_STRA14.517e-3254.61Ribose-5-phosphate isomerase A OS=Streptococcus ag... [more]
RPIA_THEEB1.006e-3153.24Ribose-5-phosphate isomerase A OS=Thermosynechococ... [more]
RPIA_TRIEI1.314e-3148.34Ribose-5-phosphate isomerase A OS=Trichodesmium er... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-G09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744810 ID=EY744810; Name=EY744810; organism=Citrus sinensis; type=EST; length=902bp
TTGATCAACAACTTCTCACAACTCACCTCTCATTTATTTTCCTCTCAAAC
TCACCCCGTCACCACCACAGCCTCCGCCCAAGAAAAATGACTTCTTTATC
CTTCCTCCCCACTCTCCATCACTCCACCTCCGCCCACTTCCTCCCACGCG
CCCCCAAATCCCTCAGACCACGCGCCATTTCCATCAAAGCCCAGGCCGTC
CCGGCCCTCACCCAAGACGACTTGAAGAAGCTCGCCGCCGACAAGGCCGT
TGACTACGTCAAATCCGGCATGGCCCTCGGCCTCGGTACCGGCTCCACCG
CCGCCTTCGTCGTCGACAGGATCGGCCAACTCTTGAAAACCGGCGAGTTA
AGGGACATCGTCGGAATCCCAACTTCAAAACGCACGGAAGAGCAAGCCAA
GTCGCTTAACATTCCCTTAACCACACTTGACGATCACCCATCACTGGATT
TGGCCATTGACGGCGCCGATGAGGTTGACCCAGAATTGAACCTCGTTAAA
GGCCGAGGCGGGGCGCTTTTGAAAGAGAAGATGGTGGAAGCTGCGTCCAA
AAGCTTCGTTGTTGTGGGTGATGAGAGTAAATTAGTGAGCGGACTCGGTG
GGAGTAAGCTTGCAATGCCAGTTGAAGGGGTTAATTTTTGCTGGAAATTC
AATTTGGGTAAGGTTCAAAAACTGGTCCGGGGAAAGGGGGTGGGAGGGCA
AACTTAAAAAAAGGGGAAAACGGGGAAACCTTAAATTAAGGGATAATTTT
AACCAACATTAATGGGATTAAAATTTCGAGAGCCCCATTAAAAAGAGGGG
GTTCCCGCCGGGGAACGGAAAATGGGGAAACTCCCAAGGGAGTTTGGGGG
AACCCCGGGGGGTGGTTTTTTGGGATAAGGGGGCAGACGGGGGGGGGAAA
CT
back to top