EY744810

Overview
NameEY744810
Unique NameEY744810
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_SCHPO (Ribose-5-phosphate isomerase OS=Schizosaccharomyces pombe GN=rki1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14
Identity = 50/137 (36.50%), Postives = 80/137 (58.39%), Query Frame = 3
Query:  225 KKLAADKAVD--YVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGS-KLAMPVE 626
            K+LA   AVD  Y ++   +G+G+GST  +VV+R+  L K G +  +V IPT  ++++   +  + L   D +P++D++ DGADEVD  L  +KG G  L +EK++   +K  V+V D  K    LG   K  +P+E
Sbjct:   17 KRLACHMAVDENYPENPKVIGIGSGSTVVYVVERL--LTKPG-VDSVVFIPTGFQSKQLIVNNGLRLGDPDCYPNVDVSFDGADEVDDNLQCIKGGGACLFQEKLIAFLAKRLVIVADSRKNSHVLGEYWKKGVPIE 150          
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_POLNS (Ribose-5-phosphate isomerase A OS=Polynucleobacter necessarius (strain STIR1) GN=rpiA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.490e-14
Identity = 51/143 (35.66%), Postives = 76/143 (53.15%), Query Frame = 3
Query:  207 LTQDDLKKLAADKAVDYV---KSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPVE 626
            + QD LK++  + A D V    +G  LG+GTGSTA + +D +   L  G     V   +S  T E+       +   +D   L   +DGADE+DP  +++KG GG L  EK++ + +K F+ + D SK V  LG    A+PVE
Sbjct:    1 MNQDQLKQMVGEAARDEVLKLPAGQVLGVGTGSTANYFIDALA--LHKGHFAGTVS--SSNATTERLLKHGFKVLDPNDVQGLPAYVDGADEIDPAGHMIKGGGGVLTGEKIIASMAKQFICICDSSKQVPVLG--NFALPVE 137          
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_BUCAT (Ribose-5-phosphate isomerase A OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=rpiA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14
Identity = 47/136 (34.56%), Postives = 77/136 (56.62%), Query Frame = 3
Query:  222 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVG-IPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPVE 626
            LKK AA  A+DY+  G  +G+GTG+T  + ++ +G +        I G + +S  +    K   I +  L +  SL + +D ADE++  + ++KG GGAL +EK++ + SK FV + D+SK V  LG     +P+E
Sbjct:    6 LKKKAAWAALDYIDPGTIIGVGTGTTIFYFIEALGTIKNL-----IYGAVSSSNSSTVLLKKHGIEVFDLKNFSSLAIYVDSADEINNHMQMIKGGGGALTREKIIASMSKKFVCIIDKSKKVDVLG--TFPLPIE 134          
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_BUCAI (Ribose-5-phosphate isomerase A OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rpiA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14
Identity = 47/136 (34.56%), Postives = 77/136 (56.62%), Query Frame = 3
Query:  222 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVG-IPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPVE 626
            LKK AA  A+DY+  G  +G+GTG+T  + ++ +G +        I G + +S  +    K   I +  L +  SL + +D ADE++  + ++KG GGAL +EK++ + SK FV + D+SK V  LG     +P+E
Sbjct:    6 LKKKAAWAALDYIDPGTIIGVGTGTTIFYFIEALGTIKNL-----IYGAVSSSNSSTVLLKKHGIEVFDLKNFSSLAIYVDSADEINNHMQMIKGGGGALTREKIIASMSKKFVCIIDKSKKVDVLG--TFPLPIE 134          
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_BUCA5 (Ribose-5-phosphate isomerase A OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=rpiA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14
Identity = 47/136 (34.56%), Postives = 77/136 (56.62%), Query Frame = 3
Query:  222 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVG-IPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPVE 626
            LKK AA  A+DY+  G  +G+GTG+T  + ++ +G +        I G + +S  +    K   I +  L +  SL + +D ADE++  + ++KG GGAL +EK++ + SK FV + D+SK V  LG     +P+E
Sbjct:    6 LKKKAAWAALDYIDPGTIIGVGTGTTIFYFIEALGTIKNL-----IYGAVSSSNSSTVLLKKHGIEVFDLKNFSSLAIYVDSADEINNHMQMIKGGGGALTREKIIASMSKKFVCIIDKSKKVDVLG--TFPLPIE 134          
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_DICNV (Ribose-5-phosphate isomerase A OS=Dichelobacter nodosus (strain VCS1703A) GN=rpiA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13
Identity = 44/139 (31.65%), Postives = 77/139 (55.40%), Query Frame = 3
Query:  207 LTQDDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPV 623
            + Q  LK+  A   +++V   + LG+G+GST    ++ + Q  +  + RDIV    +     +A    +      D P  D+ +DGADE++ +  ++KG G AL +EK++ +A+K F+ + DESK V+ LG   +A+ V
Sbjct:    1 MNQQLLKEKVAAAVLEHVPENITLGVGSGSTVLCFIEALKQAKR--QFRDIVAASETSSKALEAAGFRVRDLNACDPP--DIYVDGADEINDDKIMIKGGGAALTREKIIASAAKEFICIIDESKKVAQLGRFPVAVEV 135          
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_HALSA (Ribose-5-phosphate isomerase A OS=Halobacterium salinarium GN=rpiA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.366e-12
Identity = 55/151 (36.42%), Postives = 82/151 (54.30%), Query Frame = 3
Query:  225 KKLAADKAV-DYVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPVEGVNFCWKFNLGKVQKL 674
            K+ A + AV + V  G  +GLGTGST A  +  +G      E  D+ G+ TS  +  +A    + +T+L+   S+D+AIDGAD+V   + LVKG G A  +EK V A++  FVVV D SK    +    + +PV  V   W   + +V+ L
Sbjct:   11 KRRAGEAAVAEEVTEGAVVGLGTGSTVAHAIRALG-----AEASDVSGVATSFESRRRAVDAGVTVTSLEA-ASVDVAIDGADQVADGV-LVKGGGAAHTREKYVAASADRFVVVADPSKESDVV---DVPVPVAVVPDAWPVVVDRVEAL 151          
BLAST of EY744810 vs. ExPASy Swiss-Prot
Match: RPIA_HALS3 (Ribose-5-phosphate isomerase A OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpiA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.366e-12
Identity = 55/151 (36.42%), Postives = 82/151 (54.30%), Query Frame = 3
Query:  225 KKLAADKAV-DYVKSGMALGLGTGSTAAFVVDRIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGADEVDPELNLVKGRGGALLKEKMVEAASKSFVVVGDESKLVSGLGGSKLAMPVEGVNFCWKFNLGKVQKL 674
            K+ A + AV + V  G  +GLGTGST A  +  +G      E  D+ G+ TS  +  +A    + +T+L+   S+D+AIDGAD+V   + LVKG G A  +EK V A++  FVVV D SK    +    + +PV  V   W   + +V+ L
Sbjct:   11 KRRAGEAAVAEEVTEGAVVGLGTGSTVAHAIRALG-----AEASDVSGVATSFESRRRAVDAGVTVTSLEA-ASVDVAIDGADQVADGV-LVKGGGAAHTREKYVAASADRFVVVADPSKESDVV---DVPVPVAVVPDAWPVVVDRVEAL 151          
The following BLAST results are available for this feature:
BLAST of EY744810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 458
Match NameE-valueIdentityDescription
RPIA_SCHPO2.490e-1436.50Ribose-5-phosphate isomerase OS=Schizosaccharomyce... [more]
RPIA_POLNS2.490e-1435.66Ribose-5-phosphate isomerase A OS=Polynucleobacter... [more]
RPIA_BUCAT5.547e-1434.56Ribose-5-phosphate isomerase A OS=Buchnera aphidic... [more]
RPIA_BUCAI5.547e-1434.56Ribose-5-phosphate isomerase A OS=Buchnera aphidic... [more]
RPIA_BUCA55.547e-1434.56Ribose-5-phosphate isomerase A OS=Buchnera aphidic... [more]
RPIA_DICNV4.696e-1331.65Ribose-5-phosphate isomerase A OS=Dichelobacter no... [more]
RPIA_HALSA1.366e-1236.42Ribose-5-phosphate isomerase A OS=Halobacterium sa... [more]
RPIA_HALS31.366e-1236.42Ribose-5-phosphate isomerase A OS=Halobacterium sa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-G09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744810 ID=EY744810; Name=EY744810; organism=Citrus sinensis; type=EST; length=902bp
TTGATCAACAACTTCTCACAACTCACCTCTCATTTATTTTCCTCTCAAAC
TCACCCCGTCACCACCACAGCCTCCGCCCAAGAAAAATGACTTCTTTATC
CTTCCTCCCCACTCTCCATCACTCCACCTCCGCCCACTTCCTCCCACGCG
CCCCCAAATCCCTCAGACCACGCGCCATTTCCATCAAAGCCCAGGCCGTC
CCGGCCCTCACCCAAGACGACTTGAAGAAGCTCGCCGCCGACAAGGCCGT
TGACTACGTCAAATCCGGCATGGCCCTCGGCCTCGGTACCGGCTCCACCG
CCGCCTTCGTCGTCGACAGGATCGGCCAACTCTTGAAAACCGGCGAGTTA
AGGGACATCGTCGGAATCCCAACTTCAAAACGCACGGAAGAGCAAGCCAA
GTCGCTTAACATTCCCTTAACCACACTTGACGATCACCCATCACTGGATT
TGGCCATTGACGGCGCCGATGAGGTTGACCCAGAATTGAACCTCGTTAAA
GGCCGAGGCGGGGCGCTTTTGAAAGAGAAGATGGTGGAAGCTGCGTCCAA
AAGCTTCGTTGTTGTGGGTGATGAGAGTAAATTAGTGAGCGGACTCGGTG
GGAGTAAGCTTGCAATGCCAGTTGAAGGGGTTAATTTTTGCTGGAAATTC
AATTTGGGTAAGGTTCAAAAACTGGTCCGGGGAAAGGGGGTGGGAGGGCA
AACTTAAAAAAAGGGGAAAACGGGGAAACCTTAAATTAAGGGATAATTTT
AACCAACATTAATGGGATTAAAATTTCGAGAGCCCCATTAAAAAGAGGGG
GTTCCCGCCGGGGAACGGAAAATGGGGAAACTCCCAAGGGAGTTTGGGGG
AACCCCGGGGGGTGGTTTTTTGGGATAAGGGGGCAGACGGGGGGGGGAAA
CT
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