EY680007

Overview
NameEY680007
Unique NameEY680007
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680007 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSJ (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. japonica GN=SAMDC PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.289e-53
Identity = 113/206 (54.85%), Postives = 143/206 (69.42%), Query Frame = 3
Query:   12 EKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNT-KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKT----NESSVALMTQDSGI 614
            EKRLE++F E  VFADP GRGLR+LS+ Q+D +L  A CTIVS LSN+  DSYVLSESSLF+Y  K++IKTCGTTKLLL+IP I          + +V+Y+RG FIF  AQP PHRSFSEEVAVL+ +FG       A+V+G P    ++WH+Y A+        P+ TLEMCMTGLD+++ASVF+KT    + S    MT+ SGI
Sbjct:   21 EKRLEITFSEAPVFADPDGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDSYVLSESSLFIYSDKIVIKTCGTTKLLLTIPRILELAEGLSMPLAAVKYSRGMFIFPSAQPAPHRSFSEEVAVLNRYFGHLKSGGNAYVIGDPAKPGQKWHIYYATQHP---EQPMVTLEMCMTGLDKEKASVFFKTSADGHTSCAKEMTKLSGI 223          
BLAST of EY680007 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSI (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. indica GN=SAMDC PE=2 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.289e-53
Identity = 113/206 (54.85%), Postives = 143/206 (69.42%), Query Frame = 3
Query:   12 EKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNT-KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKT----NESSVALMTQDSGI 614
            EKRLE++F E  VFADP GRGLR+LS+ Q+D +L  A CTIVS LSN+  DSYVLSESSLF+Y  K++IKTCGTTKLLL+IP I          + +V+Y+RG FIF  AQP PHRSFSEEVAVL+ +FG       A+V+G P    ++WH+Y A+        P+ TLEMCMTGLD+++ASVF+KT    + S    MT+ SGI
Sbjct:   21 EKRLEITFSEAPVFADPDGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDSYVLSESSLFIYSDKIVIKTCGTTKLLLTIPRILELAEGLSMPLAAVKYSRGMFIFPSAQPAPHRSFSEEVAVLNRYFGHLKSGGNAYVIGDPAKPGQKWHIYYATQHP---EQPMVTLEMCMTGLDKEKASVFFKTSADGHTSCAKEMTKLSGI 223          
BLAST of EY680007 vs. ExPASy Swiss-Prot
Match: DCAM_MAIZE (S-adenosylmethionine decarboxylase proenzyme OS=Zea mays GN=SAMDC PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.289e-53
Identity = 112/208 (53.85%), Postives = 143/208 (68.75%), Query Frame = 3
Query:   12 EKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNT-KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKT----NESSVALMTQDSGIKK 620
            EKRLE++F E  VF DP GRGLR+LS+ Q+D +L  A CTIVS LSN+  DSYVLSESSLF+YP K++IKTCGTTKLLL+IP I          + +V+Y+RG+FIF GAQP PHRSFSEEVA L+ +FG       A+V+G P    ++WHV+ A+        P+  LEMCMTGLD+K+A VF+KT    N +    MT+ SGI +
Sbjct:   21 EKRLEITFSEAPVFVDPHGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDSYVLSESSLFIYPLKIVIKTCGTTKLLLTIPRILELAEELSMPLAAVKYSRGTFIFPGAQPAPHRSFSEEVAALNRYFGGLKSGGNAYVIGDPARPGQKWHVFYATEYP---EQPMVNLEMCMTGLDKKKACVFFKTNADGNTTCAKEMTKLSGISE 225          
BLAST of EY680007 vs. ExPASy Swiss-Prot
Match: DCAM_HORCH (S-adenosylmethionine decarboxylase proenzyme OS=Hordeum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.199e-53
Identity = 111/206 (53.88%), Postives = 142/206 (68.93%), Query Frame = 3
Query:   12 EKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNT-KRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNE----SSVALMTQDSGI 614
            EKRLE++F E  +FADP GRGLR+LS+ Q+D +L  A CTIVS LSN+  DSYVLSESSLF+Y  K++IKTCGTT LLL+IP I          + +V+Y+RG FIF GAQP PHRSFSEEV VL+ +FG       A+V+G P    ++WH+Y A+ +      P+ TLEMCMTGLD+ +ASVF+KT+     S    MT+ SGI
Sbjct:   14 EKRLEITFSEASIFADPHGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDSYVLSESSLFIYSQKIVIKTCGTTMLLLTIPRILELAEELCMPLAAVKYSRGMFIFPGAQPAPHRSFSEEVDVLNRYFGHLNSGGNAYVIGDPAKPGQKWHIYYATEQP---EQPMVTLEMCMTGLDKTKASVFFKTHADGHVSCAKEMTKLSGI 216          
BLAST of EY680007 vs. ExPASy Swiss-Prot
Match: DCAM_DICDI (S-adenosylmethionine decarboxylase proenzyme OS=Dictyostelium discoideum GN=amd1 PE=3 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 1.642e-24
Identity = 77/209 (36.84%), Postives = 104/209 (49.76%), Query Frame = 3
Query:    9 PEKRLEVSFFE------PGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPV-YTLEMCMTGLDRKRASVFYKTNESSVALMTQDSGI 614
            PEK+L++ F          +   P   GLR++ K +   +L  A CTI+S  SN+++DSYVLSESSLFVYP + +IKTCGTT LL  I  +          V  V ++R +      Q FPH SFS+EV  L+  F     D  A+VMG   N   W++Y A       +     T E+ M  LD      F+K    S    T +SGI
Sbjct:   32 PEKKLDIRFGPISKGSVKSIAGSPSKVGLRTIDKEKWQTVLDSARCTIISQTSNDHMDSYVLSESSLFVYPRRAMIKTCGTTTLLHLIAKMVQVGKECGLEVEMVVFSRKNLNQPSKQVFPHCSFSDEVNFLNKIF-----DGQAYVMGDV-NKDHWNLYIADFRKNPTLQRTEQTFEVMMHDLDETVMKQFFKREGVSAWDTTVNSGI 234          
BLAST of EY680007 vs. ExPASy Swiss-Prot
Match: DCAM_CAEEL (S-adenosylmethionine decarboxylase proenzyme OS=Caenorhabditis elegans GN=smd-1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.282e-23
Identity = 67/171 (39.18%), Postives = 97/171 (56.73%), Query Frame = 3
Query:   69 RGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAI--XXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYS--ASAEAGSHVNPVYTLEMCMTGLDRKRASVFYK 569
            R LR + + ++D +L  A C I+ S  NE +DSYVLSESSLF+   +VI+KTCGTT+LL ++P I            V+SV Y+R +F+    QP  H++F  EV  LD  F    +D  A+ +GS     RW++Y+     E  +H  P +TLE+ M+ LD +    F K
Sbjct:   45 RSLRIIPREEIDAMLDIARCKILHSKHNESIDSYVLSESSLFISDNRVILKTCGTTRLLAALPVIMQLAGAYAGLDQVQSVYYSRKNFLRPDLQPSLHKNFDAEVEYLDSFF----VDGHAYCLGSL-KQDRWYLYTFHREVEFPAHKQPDHTLEILMSDLDEEVLHKFTK 210          
BLAST of EY680007 vs. ExPASy Swiss-Prot
Match: DCAM_ONCVO (S-adenosylmethionine decarboxylase proenzyme OS=Onchocerca volvulus GN=smd-1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.010e-23
Identity = 70/186 (37.63%), Postives = 99/186 (53.23%), Query Frame = 3
Query:   12 EKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAI--XXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVF 563
            EK LE+ F +       G   LR++   +L  +L  A+C I+ S SNE +DSYVLSESS+F+  +++I+KTCGTT+LL +I  I            V SV Y+R +F+    QP+PH SF  EV  L+ HF       +A+ +G P    RW +Y+          P +TLE+ M GL     S F
Sbjct:   34 EKLLEIWFDKN----QNGATSLRNIPYSELVSMLDIAQCRILHSKSNECMDSYVLSESSMFISDFRIILKTCGTTRLLHAIERILHIAKIYCNMDNVVSVFYSRKNFMHPEKQPYPHSSFETEVDYLEEHFA----GGSAYCIG-PQRQDRWFLYTMVTPQAVFPFPEHTLEILMNGLPEDVLSTF 210          
BLAST of EY680007 vs. ExPASy Swiss-Prot
Match: DCAM_SCHPO (S-adenosylmethionine decarboxylase proenzyme OS=Schizosaccharomyces pombe GN=spe2 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.962e-22
Identity = 71/218 (32.57%), Postives = 118/218 (54.13%), Query Frame = 3
Query:    9 PEKRLEVSFFEPGVFADPGGR----GLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVR--YTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVY-----TLEMCMTGLDRKRASVFYKTNESSVALMTQDSGIKKDSS 629
            PEK LE+ F  P       G     GL+++S++  D++L  A+C ++S +++E +D+Y+LSESS+FV+ +K+I+KTCGTT LL S+P +           R +R  Y+R +F++   Q  PH S+ EEV  L      F     ++V+G P N   WH++S  A+  S +         TLE+ MT +  +R+  FY  +   V     D  +++ ++
Sbjct:   23 PEKLLELWFSAPIKTNLSAGEKANLGLKAVSRNDWDDMLAQAQCKVLSVVNSEEIDAYLLSESSMFVFAHKIILKTCGTTTLLASLPRLLEIASSVGFD-RPLRIFYSRKNFLYPERQLAPHTSWEEEVRYLQ----LFFPSGCSYVVG-PTNKNHWHLFSDLADDYSLLEDSLDPEDETLEVLMTDMSPERSLQFYAPSLDVVRSARGDDYVREKNN 234          
BLAST of EY680007 vs. ExPASy Swiss-Prot
Match: DCAM_RAT (S-adenosylmethionine decarboxylase proenzyme OS=Rattus norvegicus GN=Amd1 PE=2 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 8.434e-21
Identity = 67/205 (32.68%), Postives = 108/205 (52.68%), Query Frame = 3
Query:   12 EKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAI--XXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSVALMTQDSGIK 617
            EK LEV F      A  G   LR++ + + D +LK  +C+I+S    +  ++YVLSESS+FV   + I+KTCGTT LL ++  +            ++S  Y+R +F+    Q +PHR+F EE+  L+  F     +  A+ MG   N+  W++Y+        +N P  TLE+ M+ LD      FY  +  +   +T++SGI+
Sbjct:   11 EKLLEVWFSRQQSDASQGSGDLRTIPRSEWDVLLKDVQCSIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNAIF----PNGAAYCMGRM-NSDCWYLYTLDLPESRVINQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIR 210          
BLAST of EY680007 vs. ExPASy Swiss-Prot
Match: DCAM_MESAU (S-adenosylmethionine decarboxylase proenzyme OS=Mesocricetus auratus GN=AMD1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.101e-20
Identity = 67/205 (32.68%), Postives = 108/205 (52.68%), Query Frame = 3
Query:   12 EKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAI--XXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSVALMTQDSGIK 617
            EK LEV F      A  G   LR++ + + D +LK  +C+I+S    +  ++YVLSESS+FV   + I+KTCGTT LL ++  +            ++S  Y+R +F+    Q +PHR+F EE+  L+  F     +  A+ MG   N+  W++Y+        +N P  TLE+ M+ LD      FY  +  +   +T++SGI+
Sbjct:   11 EKLLEVWFSRQQSDASQGSGDLRTIPRSEWDVLLKDVQCSIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNAIF----PNGAAYCMGRM-NSDCWYLYTLDFPESRVINQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIR 210          
The following BLAST results are available for this feature:
BLAST of EY680007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
DCAM_ORYSJ1.289e-5354.85S-adenosylmethionine decarboxylase proenzyme OS=Or... [more]
DCAM_ORYSI1.289e-5354.85S-adenosylmethionine decarboxylase proenzyme OS=Or... [more]
DCAM_MAIZE1.289e-5353.85S-adenosylmethionine decarboxylase proenzyme OS=Ze... [more]
DCAM_HORCH2.199e-5353.88S-adenosylmethionine decarboxylase proenzyme OS=Ho... [more]
DCAM_DICDI1.642e-2436.84S-adenosylmethionine decarboxylase proenzyme OS=Di... [more]
DCAM_CAEEL5.282e-2339.18S-adenosylmethionine decarboxylase proenzyme OS=Ca... [more]
DCAM_ONCVO9.010e-2337.63S-adenosylmethionine decarboxylase proenzyme OS=On... [more]
DCAM_SCHPO9.962e-2232.57S-adenosylmethionine decarboxylase proenzyme OS=Sc... [more]
DCAM_RAT8.434e-2132.68S-adenosylmethionine decarboxylase proenzyme OS=Ra... [more]
DCAM_MESAU1.101e-2032.68S-adenosylmethionine decarboxylase proenzyme OS=Me... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-D10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680007 ID=EY680007; Name=EY680007; organism=Citrus sinensis; type=EST; length=939bp
CCACGCGTCCGGAAAAGAGGCTTGAAGTTTCCTTTTTTGAGCCTGGTGTC
TTTGCTGATCCTGGAGGTAGGGGCCTCCGCTCTCTGTCAAAACATCAATT
GGATGAAATACTGAAACCTGCGGAATGCACAATTGTTTCTTCGTTGTCAA
ATGAATATCTTGATTCATATGTCCTCTCAGAATCAAGCCTCTTTGTGTAC
CCTTACAAAGTTATTATCAAAACTTGTGGGACTACCAAGCTGCTTCTTTC
AATCCCTGCCATCCTCAAGTTATCTGAGTCCCTCTCGTTGTCTGTTCGAT
CTGTGAGATACACTCGTGGAAGCTTCATATTTGCTGGGGCTCAGCCATTT
CCACACCGTAGCTTCTCTGAGGAAGTAGCTGTCCTTGATGGACACTTTGG
CAAGTTTGGTATGGACAGCACAGCTTTTGTCATGGGTAGTCCTGACAACA
CAAAGAGATGGCATGTTTACTCTGCTTCTGCTGAAGCAGGAAGCCATGTA
AACCCAGTTTACACTCTAGAGATGTGCATGACTGGTTTGGACAGAAAGAG
GGCATCTGTCTTCTACAAAACTAATGAAAGCTCAGTGGCTCTGATGACCC
AAGACTCTGGCATCAAAAAAGATTCTTCCAAAATCTAAAATTTGTGATTT
TTGAGTTTGACCCTTGGTGGTTACTCCATGAAATAGTATTGAAGGGGAAT
GCATATCCTCTATCCACCTTCCCCCCTGAAAAATGGTTTCCTTTAAGCAA
ATTTTTAAGGGCGGGGGGTTAATGATTTTGAAGTTGGGGAAATTTAACTC
CCTTGCCTTGAAAAGGGTGCTTGGCTGGCTTCCAAAACCCCCTAGAATTT
TTTCTGTTTGCCTCTTCCTTTTCTAACAATTTTTTTGGGGAAAGAAAAAA
GGGGAAAAACCCCTCTTCTTGCCTGGAACATTGAAAAGG
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