EY680007

Overview
NameEY680007
Unique NameEY680007
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680007 vs. ExPASy Swiss-Prot
Match: DCAM_TRYCR (S-adenosylmethionine decarboxylase proenzyme OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.482e-14
Identity = 63/205 (30.73%), Postives = 94/205 (45.85%), Query Frame = 3
Query:    9 PEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRW-HVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSVALMTQDSGIKK 620
            PEKRLEV      +  +    GL +L       ++      IVS  SNEY+ SYVL+ESSLFV   ++I+ TCGTT LL ++P +          V  V +   ++ F   Q  PH S +EE   L  +F         F+ G  D+   +  VY          N    L M M GLDR +   ++  ++  ++  T+ + I+K
Sbjct:   31 PEKRLEVIM---RIIDETHSEGLHALGDEVWKGVVGSLNAQIVSKESNEYIRSYVLTESSLFVMRDRIILITCGTTTLLNAVPFVLDAVSDVRGEVEWVSFMHKNYSFPWEQKGPHLSMAEEFNTLRTYF----PSGKPFIFGPVDSDHYFLFVYDDVIRPCETENDT-QLSMTMYGLDRTQTKHWF--SDRFISTGTETAAIRK 225          
BLAST of EY680007 vs. ExPASy Swiss-Prot
Match: DCAM_TRYBB (S-adenosylmethionine decarboxylase proenzyme OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.646e-14
Identity = 63/189 (33.33%), Postives = 84/189 (44.44%), Query Frame = 3
Query:    9 PEKRLEVSFFEPGVFADPGGRGLRSLSKHQLD---EILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFY 566
            PEKRLEV      +     G  +  L  H  D   +++      IVS   NEY+ SYVLSESSLFV   +VI+ TCGT  LL  +P I          V  V +   ++ F   Q  PH S +EE   L  HF         F+ G P ++  + +Y  S       +    L M M GLDR +   +Y
Sbjct:   31 PEKRLEV------IMRVVDGTHVSGLLAHDDDVWQKVIDAICAHIVSREFNEYIRSYVLSESSLFVMKDRVILITCGTITLLNCVPLICEAVSTVCGEVEWVSFMHKNYSFPWEQKGPHLSMAEEFKTLRSHF----PSGQPFIFG-PIDSDHYFLYLDSDVVQPSCSDDAQLSMTMYGLDRNQTKHWY 208          
The following BLAST results are available for this feature:
BLAST of EY680007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
DCAM_TRYCR4.482e-1430.73S-adenosylmethionine decarboxylase proenzyme OS=Tr... [more]
DCAM_TRYBB7.646e-1433.33S-adenosylmethionine decarboxylase proenzyme OS=Tr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-D10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680007 ID=EY680007; Name=EY680007; organism=Citrus sinensis; type=EST; length=939bp
CCACGCGTCCGGAAAAGAGGCTTGAAGTTTCCTTTTTTGAGCCTGGTGTC
TTTGCTGATCCTGGAGGTAGGGGCCTCCGCTCTCTGTCAAAACATCAATT
GGATGAAATACTGAAACCTGCGGAATGCACAATTGTTTCTTCGTTGTCAA
ATGAATATCTTGATTCATATGTCCTCTCAGAATCAAGCCTCTTTGTGTAC
CCTTACAAAGTTATTATCAAAACTTGTGGGACTACCAAGCTGCTTCTTTC
AATCCCTGCCATCCTCAAGTTATCTGAGTCCCTCTCGTTGTCTGTTCGAT
CTGTGAGATACACTCGTGGAAGCTTCATATTTGCTGGGGCTCAGCCATTT
CCACACCGTAGCTTCTCTGAGGAAGTAGCTGTCCTTGATGGACACTTTGG
CAAGTTTGGTATGGACAGCACAGCTTTTGTCATGGGTAGTCCTGACAACA
CAAAGAGATGGCATGTTTACTCTGCTTCTGCTGAAGCAGGAAGCCATGTA
AACCCAGTTTACACTCTAGAGATGTGCATGACTGGTTTGGACAGAAAGAG
GGCATCTGTCTTCTACAAAACTAATGAAAGCTCAGTGGCTCTGATGACCC
AAGACTCTGGCATCAAAAAAGATTCTTCCAAAATCTAAAATTTGTGATTT
TTGAGTTTGACCCTTGGTGGTTACTCCATGAAATAGTATTGAAGGGGAAT
GCATATCCTCTATCCACCTTCCCCCCTGAAAAATGGTTTCCTTTAAGCAA
ATTTTTAAGGGCGGGGGGTTAATGATTTTGAAGTTGGGGAAATTTAACTC
CCTTGCCTTGAAAAGGGTGCTTGGCTGGCTTCCAAAACCCCCTAGAATTT
TTTCTGTTTGCCTCTTCCTTTTCTAACAATTTTTTTGGGGAAAGAAAAAA
GGGGAAAAACCCCTCTTCTTGCCTGGAACATTGAAAAGG
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