EY744804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: NSR1_YEAST (Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.633e-15 Identity = 50/161 (31.06%), Postives = 85/161 (52.80%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPS-----IRKSG------TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAT-DGSGQSKGFGFVQFENKESAQNAIDKLK 531 +++VG L +++ D L F +G V+ RV + T RS GYGYV++ N + A +A+ + ++ + I S P+ +K G + +F+ NL + D A+ + F+ G ++S +I T + Q KGFG+VQF N E A+ A+D L+ Sbjct: 169 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQ 329
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: ROC1_ARATH (Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.438e-15 Identity = 54/173 (31.21%), Postives = 81/173 (46.82%), Query Frame = 1 Query: 88 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDP------------SIRKSGTG-------------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKL 528 L+VG+L FNV +QL LF G V V V D T RS G+G+V ++ ++ A N L+ + +R+ P S SG+G +++ NL +D AL FS G ++ ++ D SG+SKGFGFV +++ + QNAI L Sbjct: 93 LFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSL 265
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: RBMS3_MOUSE (RNA-binding motif, single-stranded-interacting protein 3 OS=Mus musculus GN=Rbms3 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 5.865e-15 Identity = 46/157 (29.30%), Postives = 82/157 (52.23%), Query Frame = 1 Query: 49 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 519 ++ +SG Q T+LY+ L TD L L G+++S + D +T + GYG+V++ +PA A +A+ L + + + +DP+ N++I NL S+D + L + FG+++S +I D +G S+G GF + E+ E + I Sbjct: 45 SSNSSGEQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAVASLKANGVQAQMAK--QQEQDPT-------NLYISNLPISMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKCEVVI 192
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: SHEP_DROMO (Protein alan shepard OS=Drosophila mojavensis GN=shep PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 7.660e-15 Identity = 49/167 (29.34%), Postives = 79/167 (47.31%), Query Frame = 1 Query: 34 GPNGVAAGAS---GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNK--SIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 519 GPNG A + G Q T+LY+ L TD L ++ +Q G ++S + D +T + GYG+V++ PA A A+ L + + + I HR ++ N++I NL L + FG ++S +I D SKG GF + E++E + I Sbjct: 210 GPNGTAQNQNQQGGEQLSKTNLYIRGLQQGTTDKDLINMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAYAEGAVKGLQAKGVQAQMAKVGIWVLHRPAIQQEQDPTNLYIANLPPHFKETDLEAMLAKFGQVVSTRILRDQQMNSKGVGFARMESREKCEQII 376
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: SHEP_DROWI (Protein alan shepard OS=Drosophila willistoni GN=shep PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.706e-14 Identity = 49/167 (29.34%), Postives = 78/167 (46.71%), Query Frame = 1 Query: 34 GPNGVAA-----GASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 519 GPNG A G G Q T+LY+ L TD L ++ +Q G ++S + D +T + GYG+V++ PA A A+ L + + + +DP+ N++I NL L S +G ++S +I D SKG GF + E++E + I Sbjct: 216 GPNGTAQNQNQQGGGGEQLSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAYAENAVKGLQAKGVQAQMAK--QQEQDPT-------NLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQII 373
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: TIAR_HUMAN (Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.802e-14 Identity = 49/149 (32.89%), Postives = 82/149 (55.03%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGN---IFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAI 519 +LYVG+L +VT+ + LFSQ+G S ++ + ++ Y +V + DAA AL +N + K +++ ++ PS +K T N +F+ +L I + + F+ FG I ++ D +G+SKG+GFV F NK A+NAI Sbjct: 10 TLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA-TTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAI 155 HSP 2 Score: 71.633 bits (174), Expect = 7.927e-12 Identity = 44/164 (26.83%), Postives = 76/164 (46.34%), Query Frame = 1 Query: 88 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGN--------------------IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 519 ++VGDL +T + F+ G++ RV +D++T +S GYG+V++ N DA A+ + L + IR ++ R P KS N ++ + + + + TFS FG I+ ++ + KG+ FV+F ESA +AI Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE-----KGYSFVRFSTHESAAHAI 257
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: ROC5_NICSY (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.802e-14 Identity = 44/163 (26.99%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 88 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSH---------RDPSIRKSGTG------NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKL 528 LYVG+L F++T SQL ++F++ G V +V + D T RS G+ +V + +A A+ + + + + +++++ + IR + G +++ NL ++ + L D F+ +S K+ D SG+S+GFGF+ F + E+ +A+D + Sbjct: 116 LYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTM 278
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: ROC1_NICSY (29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.106e-13 Identity = 48/161 (29.81%), Postives = 80/161 (49.69%), Query Frame = 1 Query: 88 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY----SHRDPSIRKSG---------TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKL 528 ++VG+L F+ + L +LF + G V V V D T RS G+G+V ++ + A N L+ +++R+ R+ S + G + +++ NL +D AL FS G ++ K+ D SG+S+GFGFV + + E NAI+ L Sbjct: 89 IFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESL 249
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: SHEP_DROVI (Protein alan shepard OS=Drosophila virilis GN=shep PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.887e-13 Identity = 47/165 (28.48%), Postives = 78/165 (47.27%), Query Frame = 1 Query: 34 GPNGVAAGAS---GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 519 GPNG A + G Q T+LY+ L TD L ++ +Q G ++S + D +T + GYG+V++ PA A A+ L + + + +DP+ N++I NL L + +G ++S +I D SKG GF + E++E + I Sbjct: 224 GPNGTAQNQNQQGGEQLSKTNLYIRGLQQGTTDKDLINMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAYAEGAVKGLQAKGVQAQMAK--QQEQDPT-------NLYIANLPPHFKETDLEAMLAKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQII 379
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: SHEP_DROGR (Protein alan shepard OS=Drosophila grimshawi GN=shep PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.887e-13 Identity = 47/165 (28.48%), Postives = 78/165 (47.27%), Query Frame = 1 Query: 34 GPNGVAAGAS---GNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 519 GPNG A + G Q T+LY+ L TD L ++ +Q G ++S + D +T + GYG+V++ PA A A+ L + + + +DP+ N++I NL L + +G ++S +I D SKG GF + E++E + I Sbjct: 238 GPNGTAQNQNQQGGEQLSKTNLYIRGLQQGTTDKDLINMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAYAEGAVKGLQAKGVQAQMAK--QQEQDPT-------NLYIANLPPHFKETDLEAMLAKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQII 393 The following BLAST results are available for this feature:
BLAST of EY744804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY744804 ID=EY744804; Name=EY744804; organism=Citrus sinensis; type=EST; length=1000bpback to top |