EY744804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: PABP_LODEL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Lodderomyces elongisporus GN=PAB1 PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 9.277e-45 Identity = 89/169 (52.66%), Postives = 124/169 (73.37%), Query Frame = 1 Query: 22 AQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 A + G ++G + N + SLYVG+L+ +V ++ L+++FS +GQV S+RVCRD +++SLGY YVNY D +A++ LN+TP+ + RIM+S RDPS R+SG GNIFIKNL +ID+KALHDTFS+FG ILS K+ATD GQSK FGFV +E +E+AQ AI+ + Sbjct: 50 ADSAEEQGESSGIAEN---SASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKKSLGYAYVNYHKLEDGEKAIEELNYTPVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESV 215 HSP 2 Score: 85.5001 bits (210), Expect = 9.382e-20 Identity = 49/154 (31.82%), Postives = 86/154 (55.84%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI--MYSHRDPSIR----KSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 ++++ +L + + L+D FS G++LSV+V D +S +G+V+Y A A++ +N LN++ + + S +D + K+ NI++KN+D + K + F+ FG I S + D G+SKGFGFV FE E+A A+++L Sbjct: 156 NIFIKNLHPAIDNKALHDTFSAFGKILSVKVATD-DLGQSKCFGFVHYETEEAAQAAIESVNGMLLNDREVYVGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEEL 308 HSP 3 Score: 33.113 bits (74), Expect = 9.382e-20 Identity = 23/68 (33.82%), Postives = 38/68 (55.88%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQER--------EIVAIK--TKFN--NVFVKNLAESTTNEDLKKFFGEYGT 697 N IN ++++VG +K+ER E V ++ +K+ N+FVKNL E +E L++ F +GT Sbjct: 309 NDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSEKLEEEFKPFGT 376 HSP 4 Score: 92.4337 bits (228), Expect = 4.339e-18 Identity = 52/165 (31.52%), Postives = 89/165 (53.94%), Query Frame = 1 Query: 82 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRD----------------PSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 T++YV ++D T+ + +LF+ G++ S+ + +D + +S G+G+VN+ AA+A++ LN +N + I + + + + K N+F+KNLD+ ID + L + F FG I S K+ D +G+SKGFGFV F E A AI ++ Sbjct: 248 TNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKD-AEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSEKLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEM 411
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: PAP1B_DICDI (Polyadenylate-binding protein 1-B OS=Dictyostelium discoideum GN=pabpc1B PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.750e-43 Identity = 94/188 (50.00%), Postives = 127/188 (67.55%), Query Frame = 1 Query: 10 RQHQAQMSGPNGVAAGASGNQFLT-------------TSLYVGDLDFNVTDSQLYDLFSQVGQ--VLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 + HQ + P G AGA+G L+ TSLYVGDL +V + L +LFS+VG+ + S+ VCRD +T RSLGY YVN+ N DA RALD LN+T ++ K RIM+S+RDP+ RK+ GNIF+KNL+K +D+ L+DTFSSFGNILSCK+ + G SKG+G+V FE +SA+ AI+K+ Sbjct: 147 QHHQHHHTSPMGAGAGAAGMPILSMSPIGAYQPPHQLTSLYVGDLAADVNEIILNELFSKVGRNAIASIHVCRDSNTLRSLGYAYVNFFNNHDAERALDTLNYTLVHGKPCRIMWSYRDPTKRKTNVGNIFVKNLEKGVDNAMLYDTFSSFGNILSCKVEFE-KGISKGYGYVHFETNDSAEKAIEKV 333 HSP 2 Score: 80.1073 bits (196), Expect = 2.229e-14 Identity = 49/146 (33.56%), Postives = 79/146 (54.11%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSS-FGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 519 +++V +L+ V ++ LYD FS G +LS +V + S GYGYV++ A +A++ +N T + K I + R +F +N D+SI + L S+ FG I SC + D +G+SKG G V+F+N+E AQ + Sbjct: 275 NIFVKNLEKGVDNAMLYDTFSSFGNILSCKV--EFEKGISKGYGYVHFETNDSAEKAIEKVNGTLILGKPINV-ERFVSKVERYKVENKVFFRNADESITIEILQQELSNRFGEIESCILKNDANGKSKGLGLVEFKNQEDAQKIL 417
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: PABPX_ARATH (Probable polyadenylate-binding protein At2g36660 OS=Arabidopsis thaliana GN=At2g36660 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.454e-42 Identity = 75/160 (46.88%), Postives = 109/160 (68.12%), Query Frame = 1 Query: 49 AAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKL 528 A+ + + +T SLYVGDL +VT+ LYD F++ + SVR+C+D S+ RSL YGY N+ + DA A++ N + LN K IR+M+S R P R++G GN+F+KNL +S+ + L D F FGNI+SCK+AT G+S+G+GFVQFE +++A AI L Sbjct: 13 ASSSGSSSPVTASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTL 172 HSP 2 Score: 42.3578 bits (98), Expect = 1.454e-42 Identity = 18/55 (32.73%), Postives = 36/55 (65.45%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQEREIVAIKTKFNNVFVKNLAESTTNEDLKKFFGEYG 694 N ++ DK+++VG F++K +R V + K+ N+++KNL + + L++ F E+G Sbjct: 173 NSTIVADKEIYVGKFMKKTDR--VKPEEKYTNLYMKNLDADVSEDLLREKFAEFG 225 HSP 3 Score: 78.5666 bits (192), Expect = 9.995e-19 Identity = 46/148 (31.08%), Postives = 79/148 (53.38%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI--MYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAID 522 +++V +L +VT++ L D+F + G ++S +V L +S GYG+V + A A+ LN T + +K I + D + N+++KNLD + L + F+ FG I+S IA D + +G+ FV F+N E A+ A + Sbjct: 113 NVFVKNLPESVTNAVLQDMFKKFGNIVSCKVAT-LEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDRVKPEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAE 259 HSP 4 Score: 36.5798 bits (83), Expect = 9.995e-19 Identity = 21/68 (30.88%), Postives = 34/68 (50.00%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQEREIVAIK------------TKFNNVFVKNLAESTTNEDLKKFFGEYGT 697 NG K ++VG +K ERE + + K +N++VKN+ + T E+L+K F + GT Sbjct: 262 NGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGT 329 HSP 5 Score: 89.3521 bits (220), Expect = 3.674e-17 Identity = 51/162 (31.48%), Postives = 89/162 (54.94%), Query Frame = 1 Query: 82 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRI----MYSHRDPSIRK------------SGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 519 T+LY+ +LD +V++ L + F++ G+++S+ + +D R GY +VN+ NP DA RA + +N T +K + + + R+ +R+ + NI++KN++ ++ + L FS G I S K+ D G+SKGFGFV F E A +A+ Sbjct: 201 TNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKD-ENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAV 361
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: PABP_ENCCU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Encephalitozoon cuniculi GN=PAB1 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.299e-24 Identity = 61/145 (42.07%), Postives = 87/145 (60.00%), Query Frame = 1 Query: 85 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 519 ++YVG+L DS L+ +FS VG+VLSV++ + S + +V + N DA RA+ L+N+ IR+M P TGNIF+KNL + K L D FS FG I+SCK+AT G+SKG+GFVQF+ K++A+ I Sbjct: 15 TIYVGELSPKTLDSDLFRVFSNVGKVLSVKLIKRAEPVSS--FAFVTFENEEDAERAIREYKHYELHNRQIRVMKKDERPP----ETGNIFVKNLPEDFTGKDLDDAFSMFGEIVSCKVATTSHGKSKGYGFVQFKEKKAAKKVI 153 HSP 2 Score: 21.557 bits (44), Expect = 3.299e-24 Identity = 12/56 (21.43%), Postives = 25/56 (44.64%), Query Frame = 2 Query: 530 NGMLINDKQVFVGHFLRKQER-EIVAIKTKFNNVFVKNLAESTTNEDLKKFFGEYG 694 +G+L+ ++ V + + ++ E F N F+KN + +L + YG Sbjct: 160 DGLLLGGNRIVVELYNPEIKKGESKKTSATFTNCFIKNFPFDASEAELLELLERYG 215
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: PES4_YEAST (Protein PES4 OS=Saccharomyces cerevisiae GN=PES4 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 3.430e-23 Identity = 57/147 (38.78%), Postives = 91/147 (61.90%), Query Frame = 1 Query: 88 LYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI 519 L++GDL VT+ L +F + +S +VC D T++SLG+GY+N+ + +A +A++ LN+T +N K IRIM S R+ + RK+ N+F NL + + + +DTFS +G ILSCK+ K GFV FE++++A+N I Sbjct: 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEELNYTKVNGKEIRIMPSLRNTTFRKNFGTNVFFSNLPLNNPLLTTRVFYDTFSRYGKILSCKL-----DSRKDIGFVYFEDEKTARNVI 234
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: ELAV3_MOUSE (ELAV-like protein 3 OS=Mus musculus GN=Elavl3 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.223e-22 Identity = 58/166 (34.94%), Postives = 94/166 (56.63%), Query Frame = 1 Query: 37 PNGVAAGASG-NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKL 528 PNG G +G T+L V L N+T + LF +G + S ++ RD T +SLGYG+VNY++P DA +A++ LN L K+I++ Y+ PS N+++ L K++ K + FS +G I++ +I D +G S+G GF++F+ + A+ AI L Sbjct: 23 PNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGL 186
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: ELAV3_HUMAN (ELAV-like protein 3 OS=Homo sapiens GN=ELAVL3 PE=1 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 2.904e-22 Identity = 58/166 (34.94%), Postives = 94/166 (56.63%), Query Frame = 1 Query: 37 PNGVAAGASG-NQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 528 PNG G +G T+L V L N+T + LF +G + S ++ RD T +SLGYG+VNY++P DA +A++ LN L K+I++ Y+ PS N+++ L K++ K + FS +G I++ +I D +G S+G GF++F+ + A+ AI L Sbjct: 23 PNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: ELAV2_XENTR (ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl2 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 6.469e-22 Identity = 56/158 (35.44%), Postives = 92/158 (58.23%), Query Frame = 1 Query: 58 ASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 528 +S + T+L V L N+T +L LF +G++ S ++ RD T +SLGYG+VNY +P DA +A++ LN L K+I++ Y+ PS N+++ L K++ K L FS +G I++ +I D +G S+G GF++F+ + A+ AI L Sbjct: 59 SSNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 214
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: ELAV3_XENLA (ELAV-like protein 3 OS=Xenopus laevis GN=elavl3 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 8.449e-22 Identity = 57/168 (33.93%), Postives = 97/168 (57.74%), Query Frame = 1 Query: 28 MSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 528 ++G NG A + T+L V L N+T + LF +G++ S ++ RD T +SLGYG+VNY +P DA +A++ LN L K+I++ Y+ PS N+++ +L K+++ K + FS +G I++ +I D +G S+G GF++F+ + A+ AI L Sbjct: 22 LNGTNGEADDSK------TNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYAR--PSSASIRDANLYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 181
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: ELAV2_PONAB (ELAV-like protein 2 OS=Pongo abelii GN=ELAVL2 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.104e-21 Identity = 55/150 (36.67%), Postives = 89/150 (59.33%), Query Frame = 1 Query: 82 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 528 T+L V L N+T +L LF +G++ S ++ RD T +SLGYG+VNY +P DA +A++ LN L K+I++ Y+ PS N+++ L K++ K L FS +G I++ +I D +G S+G GF++F+ + A+ AI L Sbjct: 39 TNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186 The following BLAST results are available for this feature:
BLAST of EY744804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744804 ID=EY744804; Name=EY744804; organism=Citrus sinensis; type=EST; length=1000bpback to top |