EY744804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: SF3B4_HUMAN (Splicing factor 3B subunit 4 OS=Homo sapiens GN=SF3B4 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 7.908e-20 Identity = 60/163 (36.81%), Postives = 92/163 (56.44%), Query Frame = 1 Query: 46 VAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSC-KIATD-GSGQSKGFGFVQFENKESAQNAIDKL 528 +AAG + ++YVG LD V++ L++LF Q G V++ + +D T + GYG+V + + DA A+ ++N L K IR+ + G NIFI NLD ID K L+DTFS+FG IL KI D +G SKG+ F+ F + +++ AI+ + Sbjct: 1 MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVG-ANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAM 162
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: SXL_MEGSC (Sex-lethal homolog OS=Megaselia scalaris GN=SXL PE=2 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 1.491e-18 Identity = 53/157 (33.76%), Postives = 85/157 (54.14%), Query Frame = 1 Query: 61 SGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKL 528 SG T+L V L ++ D +LY LF +G + + R+ RD T S GYG+V++ + ADA RA++ LN + NK I++ ++ P + N+++ NL +SI + L F +G I+ I D +G +G F++F +E AQ AI L Sbjct: 71 SGTNNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNGITVRNKRIKVSFAR--PGGEQLRDTNLYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAISAL 225
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: MIP6_YEAST (RNA-binding protein MIP6 OS=Saccharomyces cerevisiae GN=MIP6 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.948e-18 Identity = 52/152 (34.21%), Postives = 83/152 (54.61%), Query Frame = 1 Query: 79 TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNL---DKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDK 525 T SL++G+L VT+ L +F + S +VCRD T++SLGYGY+N+ + DA A N+T + ++IM S ++ RK+ N+F NL + + ++ + +GN+LSC + + K GFV F+N SA+N I K Sbjct: 110 TNSLFIGNLKSTVTEEMLRKIFKRYQSFESAKVCRDFLTKKSLGYGYLNFKDKNDAESARKEFNYTVFFGQEVKIMPSMKNTLFRKNIGTNVFFSNLPLENPQLTTRSFYLIMIEYGNVLSCLLE-----RRKNIGFVYFDNDISARNVIKK 256
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: SXL_DROME (Protein sex-lethal OS=Drosophila melanogaster GN=Sxl PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.263e-17 Identity = 53/170 (31.18%), Postives = 90/170 (52.94%), Query Frame = 1 Query: 43 GVAAGASGNQFL-------TTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 528 G++ G+ G+ L T+L V L ++TD +LY LF +G + + R+ RD T S GY +V++ + D+ RA+ VLN + NK +++ Y+ P N+++ NL ++I L F +G+I+ I D +G+ +G FV++ +E AQ AI L Sbjct: 105 GLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYAR--PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 272
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: SXL_CERCA (Sex-lethal homolog OS=Ceratitis capitata GN=SXL PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 2.154e-17 Identity = 54/166 (32.53%), Postives = 87/166 (52.41%), Query Frame = 1 Query: 34 GPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 528 G +G G++G T+L V L ++TD +LY LF +G + + R+ RD T S GY +V++A D+ RA+ LN + NK +++ Y+ P N+++ NL ++I L F +G I+ I D +G+ +G FV+F +E AQ AI L Sbjct: 99 GRDGHGGGSNG-----TNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKSLNGITVRNKRLKVSYAR--PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 257
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: SXL_DROSU (Protein sex-lethal OS=Drosophila subobscura GN=Sxl PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 3.674e-17 Identity = 49/150 (32.67%), Postives = 82/150 (54.67%), Query Frame = 1 Query: 82 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 528 T+L V L ++TD +LY LF +G + + R+ RD T S GY +V++ + D+ RA+ VLN + NK +++ Y+ P N+++ NL ++I L F +G+I+ I D +G+ +G FV++ +E AQ AI L Sbjct: 127 TNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYAR--PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 274
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: SXL_CHRRU (Sex-lethal homolog OS=Chrysomya rufifacies GN=SXL PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 4.798e-17 Identity = 50/150 (33.33%), Postives = 80/150 (53.33%), Query Frame = 1 Query: 82 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 528 T+L V L ++TD +LY LF G + + R+ +D T S GY +V++A+ DA A+ LN + NK +++ Y+ P N+++ NL ++I L F +GNI+ I D +G+ +G FV+F +E AQ AI L Sbjct: 85 TNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNGVTVRNKRLKVSYAR--PGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 232
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: SXL_MUSDO (Sex-lethal homolog OS=Musca domestica GN=SXL PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 8.184e-17 Identity = 49/150 (32.67%), Postives = 80/150 (53.33%), Query Frame = 1 Query: 82 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 528 T+L V L ++TD +LY LF G + + R+ +D T S GY +V++A+ DA A+ +N + NK +++ Y+ P N+++ NL ++I L F +GNI+ I D +G+ +G FV+F +E AQ AI L Sbjct: 102 TNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNGITVRNKRLKVSYAR--PGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISAL 249
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: ELAV4_XENTR (ELAV-like protein 4 OS=Xenopus tropicalis GN=elavl4 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 8.184e-17 Identity = 57/194 (29.38%), Postives = 95/194 (48.97%), Query Frame = 1 Query: 37 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTR-----------------------------RSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 528 P+ + GA+ + T+L V L N+T + LF +G++ S ++ RD T +SLGYG+VNY +P DA +A++ LN L K+I++ Y+ PS N+++ L K++ K L FS +G I++ +I D +G S+G GF++F+ + A+ AI L Sbjct: 37 PSPMQTGAATDDS-KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGTQFEEHFKDLATGTKWKPLTEEGPIFGKGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 227
BLAST of EY744804 vs. ExPASy Swiss-Prot
Match: ELAV4_XENLA (ELAV-like protein 4 OS=Xenopus laevis GN=elavl4 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 8.184e-17 Identity = 57/194 (29.38%), Postives = 95/194 (48.97%), Query Frame = 1 Query: 37 PNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTR-----------------------------RSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKL 528 P+ + GA+ + T+L V L N+T + LF +G++ S ++ RD T +SLGYG+VNY +P DA +A++ LN L K+I++ Y+ PS N+++ L K++ K L FS +G I++ +I D +G S+G GF++F+ + A+ AI L Sbjct: 37 PSPMQTGAATDDS-KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGTQFEENFKDLATGTKWKPLTEEGPIFGKGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR--PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 227 The following BLAST results are available for this feature:
BLAST of EY744804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744804 ID=EY744804; Name=EY744804; organism=Citrus sinensis; type=EST; length=1000bpback to top |