EY679940
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679940 vs. ExPASy Swiss-Prot
Match: YEAT_ECOLI (Uncharacterized HTH-type transcriptional regulator yeaT OS=Escherichia coli (strain K12) GN=yeaT PE=4 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.538e-12 Identity = 43/135 (31.85%), Postives = 71/135 (52.59%), Query Frame = -1 Query: 17 LADFVLFLAIARHKSFSRAGQEVGISASALSHAIKGLETRLGVRLLNRTTRSVTLTAAGEELHSVISVPMDEIGQAMEALNRFRDEPTGRIRLNTLSDAADLLLGPVLPVFNDRYPEIEIDLTVTN-LISTRNSG 418 L D +F+ +AR F+ +E+G+S + +S I LE L V LL+RTTR VT+T GE ++ + ++GQ M+ L+ R P G +R+ + ++ P L YP++E+ V + L+ N G Sbjct: 7 LNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALLEQTLNVVLLHRTTRRVTITEEGERIYEWAQRILQDVGQMMDELSDVRQVPQGMLRIISSFGFGRQVVAPALLALAKAYPQLELRFDVEDRLVDLVNEG 141
BLAST of EY679940 vs. ExPASy Swiss-Prot
Match: Y4MQ_RHISN (Uncharacterized HTH-type transcriptional regulator y4mQ OS=Rhizobium sp. (strain NGR234) GN=NGR_a02420 PE=4 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.633e-12 Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = -1 Query: 59 NLADFVLFLAIARHKSFSRAGQEVGISASALSHAIKGLETRLGVRLLNRTTRSVTLTAAGEELHSVISVPMDEIGQAMEALNRFRDEPTGRIRLNTLSDAADLLLGPVLPVFNDRYPEIEI 421 +L+ +F A AR SF A +E+ +S SA+SHAI LE LGV L RTTRSV+LT AG+ L + S +E+ + +E ++ + + +RL+ A +L P LP F P IE+ Sbjct: 6 SLSAMRIFEAAARLGSFRAAAEELNLSPSAVSHAIMRLERDLGVALFERTTRSVSLTVAGQTLLNHASNAFEELRRGVEQISSNKAQ---LLRLHCAPSFAAQVLSPRLPQFLKENPGIEV 123
BLAST of EY679940 vs. ExPASy Swiss-Prot
Match: LTRA_KLEPN (Probable HTH-type transcriptional regulator ltrA OS=Klebsiella pneumoniae GN=ltrA PE=4 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.700e-11 Identity = 37/122 (30.33%), Postives = 66/122 (54.10%), Query Frame = -1 Query: 53 LADFVLFLAIARHKSFSRAGQEVGISASALSHAIKGLETRLGVRLLNRTTRSVTLTAAGEELHSVISVPMDEIGQAMEALNRFRDEPTGRIRLNTLSDAADLLLGPVLPVFNDRYPEIEIDL 418 L D LF+ I SFS ++ GI+ SA+S ++ LE +G +LL RTTR + L+ AGE ++ ++ QAM++ + G++ L+ ++ P++ F RYP++++ L Sbjct: 6 LPDLALFVQIVDQGSFSAVARQNGITPSAVSRSVSRLEREMGCKLLQRTTRKLRLSDAGETIYQHAQQMLEAARQAMDSAGSRQTVAQGKLTLSVPKAVGRFVIHPLMMAFFHRYPQVDVCL 127
BLAST of EY679940 vs. ExPASy Swiss-Prot
Match: DSDC_ECOLI (HTH-type transcriptional regulator dsdC OS=Escherichia coli (strain K12) GN=dsdC PE=4 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.948e-11 Identity = 42/120 (35.00%), Postives = 63/120 (52.50%), Query Frame = -1 Query: 41 FLAIARHKSFSRAGQEVGISASALSHAIKGLETRLGVRLLNRTTRSVTLTAAGEELHSVISVPMDEIGQAMEALNRFRDEPTGRIRLNTLSDAADLLLGPVLPVFNDRYPEIEIDLTVTN 400 F ARH+SF+ A +E+ +S SA+SH I LE LG++L R+ R V LT G+ ++ + +D + Q E L+ E +G + L + A L P L F RYP I + + N Sbjct: 23 FEVAARHQSFALAAEELSLSPSAVSHRINQLEEELGIQLFVRSHRKVELTHEGKRVYWALKSSLDTLNQ--EILDIKNQELSGTLTLYSRPSIAQCWLVPALGDFTRRYPSISLTVLTGN 140 The following BLAST results are available for this feature:
BLAST of EY679940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679940 ID=EY679940; Name=EY679940; organism=Citrus sinensis; type=EST; length=976bpback to top |