EY744796
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744796 vs. ExPASy Swiss-Prot
Match: TLP10_ORYSJ (Tubby-like F-box protein 10 OS=Oryza sativa subsp. japonica GN=TULP10 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.251e-40 Identity = 82/163 (50.31%), Postives = 109/163 (66.87%), Query Frame = 1 Query: 118 DSSQHSLWANLPPELLLDIVRRVEESETS-WPARAVVVFCASVCRTWREVTKEIVQTPEQCGRFTFPISLKQPGPRESPIQCFIRRDRGTSTYHLCFGLVPSEDGSDKLLLAARKIRRATCTDFVISLAANDFSRASNSYVGKLRSNFLGTKFTIYDSQPPCD 603 + + W L PEL+ ++VRRVE S WPAR +V CA VCR WRE +V+ + GR TFP SLKQPGP++ PIQCF++R++ S ++L GL+ K L+AAR+ RR T++VISL A+D S+ SN+YVGKLRS+F GT F IYD+QPP D Sbjct: 17 EGEEEGRWGGLLPELVEEVVRRVEASGGERWPARKDLVSCACVCRRWREAAAAVVRPLPESGRITFPSSLKQPGPKDFPIQCFVKRNKKKSMFYLYLGLLNGTMDKGKFLMAARRFRRGPHTEYVISLDADDLSQGSNAYVGKLRSDFWGTNFKIYDNQPPYD 179
BLAST of EY744796 vs. ExPASy Swiss-Prot
Match: TLP2_ORYSJ (Tubby-like F-box protein 2 OS=Oryza sativa subsp. japonica GN=TULP2 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.171e-38 Identity = 81/181 (44.75%), Postives = 110/181 (60.77%), Query Frame = 1 Query: 70 SRKQTHIAPDQT-----LLSSDSSQHSLWANLPPELLLDIVRRVEESETSWPARAVVVFCASVCRTWREVTKEIVQTPEQCGRFTFPISLKQPGPRESPIQCFIRRDRGTSTYHLCFGLVPSEDGSDKLLLAARKIRRATCTDFVISLAANDFSRASNSYVGKLRSNFLGTKFTIYDSQPP 597 +R ++PD + L + + W+ L P+LL DI+R VE WP R VV CASVCR WR+V +VQ P + G+ TFP SLKQPGPR++P+QCFI+R++ ST+ L GL +K LLAAR+ RR ++ I++ ++ S S VG L+SNF GTKFTI D QPP Sbjct: 23 ARTNARVSPDVSSELSPLAGEEGAGEERWSALVPDLLADILRCVEAGSERWPPRRDVVACASVCRRWRDVAVAVVQPPLESGKITFPSSLKQPGPRDAPMQCFIKRNKKNSTFFLYLGLTQELTDDEKFLLAARRCRRGLHKEYAITINSDGLFHGSQSCVGNLKSNFTGTKFTIRDWQPP 203
BLAST of EY744796 vs. ExPASy Swiss-Prot
Match: TLP4_ARATH (Putative Tubby-like protein 4 OS=Arabidopsis thaliana GN=TULP4 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.371e-23 Identity = 46/87 (52.87%), Postives = 63/87 (72.41%), Query Frame = 1 Query: 148 LPPELLLDIVRRVEESETSWPARAVVVFCASVCRTWREVTKEIVQTPEQCGRFTFPISLKQPGPRESPIQCFIRRDRGTSTYHLCFG 408 +PPELL D++ R+E SE +WP+R VV C VC+ WR++ KEIV PE +FTFPISLKQPGP S +QC+++R+R T++L G Sbjct: 1 MPPELLRDVLMRIERSEDTWPSRKNVVSCVGVCKNWRQIFKEIVNVPEVSSKFTFPISLKQPGPGGSLVQCYVKRNRSNQTFYLYLG 87
BLAST of EY744796 vs. ExPASy Swiss-Prot
Match: TUB_RAT (Tubby protein homolog OS=Rattus norvegicus GN=Tub PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.453e-13 Identity = 44/121 (36.36%), Postives = 67/121 (55.37%), Query Frame = 1 Query: 328 QPGPRESPIQCFIRRDR---GTSTYHLCFGLVPSEDGSDKLLLAARKIRRATCTDFVISLAANDFSRASNSYVGKLRSNFLGTKFTIYDS----QPPCDMTIQPPGGMSRRSLLSRCLKNN 669 +P P+ I+C I RD+ Y F + EDG LLA RK +++ ++++IS+ D SR +SY+GKLRSN +GTKFT+YD+ Q T++ G R+ L + C + N Sbjct: 256 RPAPQGITIKCRITRDKKGMDRGMYPTYFLHLDREDGKKVFLLAGRKRKKSKTSNYLISVDPTDLSRGGDSYIGKLRSNLMGTKFTVYDNGVNPQKASSSTLE--SGTLRQELAAVCYETN 374
BLAST of EY744796 vs. ExPASy Swiss-Prot
Match: TUB_MOUSE (Tubby protein OS=Mus musculus GN=Tub PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.453e-13 Identity = 44/121 (36.36%), Postives = 67/121 (55.37%), Query Frame = 1 Query: 328 QPGPRESPIQCFIRRDR---GTSTYHLCFGLVPSEDGSDKLLLAARKIRRATCTDFVISLAANDFSRASNSYVGKLRSNFLGTKFTIYDS----QPPCDMTIQPPGGMSRRSLLSRCLKNN 669 +P P+ I+C I RD+ Y F + EDG LLA RK +++ ++++IS+ D SR +SY+GKLRSN +GTKFT+YD+ Q T++ G R+ L + C + N Sbjct: 256 RPAPQGITIKCRITRDKKGMDRGMYPTYFLHLDREDGKKVFLLAGRKRKKSKTSNYLISVDPTDLSRGGDSYIGKLRSNLMGTKFTVYDNGVNPQKASSSTLE--SGTLRQELAAVCYETN 374
BLAST of EY744796 vs. ExPASy Swiss-Prot
Match: TUB_HUMAN (Tubby protein homolog OS=Homo sapiens GN=TUB PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.453e-13 Identity = 44/121 (36.36%), Postives = 67/121 (55.37%), Query Frame = 1 Query: 328 QPGPRESPIQCFIRRDR---GTSTYHLCFGLVPSEDGSDKLLLAARKIRRATCTDFVISLAANDFSRASNSYVGKLRSNFLGTKFTIYDS----QPPCDMTIQPPGGMSRRSLLSRCLKNN 669 +P P+ I+C I RD+ Y F + EDG LLA RK +++ ++++IS+ D SR +SY+GKLRSN +GTKFT+YD+ Q T++ G R+ L + C + N Sbjct: 257 RPAPQGITIKCRITRDKKGMDRGMYPTYFLHLDREDGKKVFLLAGRKRKKSKTSNYLISVDPTDLSRGGDSYIGKLRSNLMGTKFTVYDNGVNPQKASSSTLE--SGTLRQELAAVCYETN 375
BLAST of EY744796 vs. ExPASy Swiss-Prot
Match: TULP2_MOUSE (Tubby-related protein 2 OS=Mus musculus GN=Tulp2 PE=2 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 4.638e-11 Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 331 PGPRESPIQCFIRRDRGTSTYHLCFGLVPS-------EDGSDKLLLAARKIRRATCTDFVISLAANDFSRASNSYVGKLRSNFLGTKFTIYDS 588 P PR+ +QC I R++ + + G+ PS EDG LLA RK +R+ ++++ISL D SR +++VGK+RSN LGTKFTI+D+ Sbjct: 315 PAPRDHMVQCRIVRNK----HGMDKGMFPSYYLYLEAEDGVAHFLLAGRKRKRSKTSNYLISLDPKDMSRNGSNFVGKVRSNVLGTKFTIFDN 403 The following BLAST results are available for this feature:
BLAST of EY744796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY744796 ID=EY744796; Name=EY744796; organism=Citrus sinensis; type=EST; length=936bpback to top |