EY679918

Overview
NameEY679918
Unique NameEY679918
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_ECO57 (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Escherichia coli O157:H7 GN=rihA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.465e-30
Identity = 79/187 (42.25%), Postives = 108/187 (57.75%), Query Frame = 2
Query:   59 IIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            I++D DPG DDA+AI+LAL SPE++V  +T+  GN       RN L +L +  RTDIPVA G+   + +  +L IAD VHG  GL       P   P   +A + + +        +T+V+ GP TN+AL +   P     I +IVI+GGA  + GN  PAAE NI+ DP+AA+IVF  G  VV  G
Sbjct:    5 ILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIPVAGGAVKPLMR--ELIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGL-GNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_ECO55 (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Escherichia coli (strain 55989 / EAEC) GN=rihA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.465e-30
Identity = 79/187 (42.25%), Postives = 108/187 (57.75%), Query Frame = 2
Query:   59 IIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            I++D DPG DDA+AI+LAL SPE++V  +T+  GN       RN L +L +  RTDIPVA G+   + +  +L IAD VHG  GL       P   P   +A + + +        +T+V+ GP TN+AL +   P     I +IVI+GGA  + GN  PAAE NI+ DP+AA+IVF  G  VV  G
Sbjct:    5 ILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIPVAGGAVKPLMR--ELIIADNVHGESGLDGPALPEPAFAPQNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGL-GNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_ECO24 (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=rihA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.465e-30
Identity = 79/187 (42.25%), Postives = 108/187 (57.75%), Query Frame = 2
Query:   59 IIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            I++D DPG DDA+AI+LAL SPE++V  +T+  GN       RN L +L +  RTDIPVA G+   + +  +L IAD VHG  GL       P   P   +A + + +        +T+V+ GP TN+AL +   P     I +IVI+GGA  + GN  PAAE NI+ DP+AA+IVF  G  VV  G
Sbjct:    5 ILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIPVAGGAVKPLMR--ELIIADNVHGESGLDGPALPEPAFAPQNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGL-GNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHC_KLEP3 (Non-specific ribonucleoside hydrolase rihC OS=Klebsiella pneumoniae (strain 342) GN=rihC PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.219e-30
Identity = 83/187 (44.39%), Postives = 114/187 (60.96%), Query Frame = 2
Query:   59 IIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            II+DTDPG+DDA AI  AL +PE+E+  +TT+ GNV     TRNAL LL      D+P+A+G+ + + +   LR A  VHG  G+   +F   + +P+A+ A   I +        IT+VA+GPLTNIAL + Q P  V NI ++VI+GG+ A  GN  P AE NI  DP+AA  VF  G ++V  G
Sbjct:    5 IILDTDPGIDDAAAIAAALFAPELELQLMTTVAGNVSVEKTTRNALQLLHF-WNADVPLAQGASMPLVR--PLRDAASVHGESGMEGYDFVEHQRQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLTQYPECVFNIRRLVIMGGS-AGRGNFTPNAEFNIAIDPEAAAKVFHSGLEIVMCG 187          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_SALNS (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Salmonella newport (strain SL254) GN=rihA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.205e-30
Identity = 79/187 (42.25%), Postives = 107/187 (57.22%), Query Frame = 2
Query:   59 IIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            I+ D DPG DDA+AI+LAL SPE++V  +T+  GN       RN L +L +  RTDI VA G+   + +   L IAD VHG  GL       P   P+  +A + + +     P  +T+V+ GP TN+AL +   P     I +IVI+GGA  + GN  PAAE NI+ DP+AA+IVF  G  VV  G
Sbjct:    5 ILFDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPDKTLRNVLRMLTLLNRTDISVAGGAVKPLMR--DLIIADNVHGESGLDGPALPEPAFAPLDCTAVELMAKVLRESPEPVTIVSTGPQTNVALLLNSHPELHAKIARIVIMGGAMGL-GNWTPAAEFNIYVDPEAAEIVFQSGIRVVMAG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_SALDC (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Salmonella dublin (strain CT_02021853) GN=rihA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.205e-30
Identity = 79/187 (42.25%), Postives = 108/187 (57.75%), Query Frame = 2
Query:   59 IIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            IIID DPG DDA+A++L+L SPE+EV  +T+  GN       RN L +L +  R DIPVA G+   + +  +L IAD VHG  GL       P   P + +A + + +        +T+V+ GP TN+AL +   P     I +IVI+GGA  + GN  PAAE NI+ DP+AA+IVF  G  VV  G
Sbjct:    5 IIIDCDPGHDDAIALVLSLASPELEVKAITSSAGNQTPEKTLRNVLRMLTLLKRPDIPVAGGAVKPLMR--ELIIADNVHGESGLDGPALPEPSFAPQSGTAVELMAKTLRESSQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAMGL-GNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_ECOL5 (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=rihA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.205e-30
Identity = 79/187 (42.25%), Postives = 107/187 (57.22%), Query Frame = 2
Query:   59 IIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            I++D DPG DDA+AI+LAL SPE++V  +T+  GN       RN L +L +  RTDIPVA G+   + +   L IAD VHG  GL       P   P   +A + + +        +T+V+ GP TN+AL +   P     I +IVI+GGA  + GN  PAAE NI+ DP+AA+IVF  G  VV  G
Sbjct:    5 ILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIPVASGAVKPLMR--NLIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLCESEEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGL-GNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_ECO81 (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Escherichia coli O81 (strain ED1a) GN=rihA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.205e-30
Identity = 79/187 (42.25%), Postives = 107/187 (57.22%), Query Frame = 2
Query:   59 IIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            I++D DPG DDA+AI+LAL SPE++V  +T+  GN       RN L +L +  RTDIPVA G+   + +   L IAD VHG  GL       P   P   +A + + +        +T+V+ GP TN+AL +   P     I +IVI+GGA  + GN  PAAE NI+ DP+AA+IVF  G  VV  G
Sbjct:    5 ILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIPVASGAVKPLMR--NLIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLCESEEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGL-GNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHA_SHEB5 (Pyrimidine-specific ribonucleoside hydrolase rihA OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=rihA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.492e-30
Identity = 80/189 (42.33%), Postives = 107/189 (56.61%), Query Frame = 2
Query:   53 KKIIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            + II+D DPG DDA+A++LAL  P++  + +TT  GN        NAL +L +  R DIPVA G+   +T+  +L IAD VHG  GL       P   P A +A + + +Q       +T+V  GPLTNIAL +         I +IV++GGA  V GN  PAAE NIF DP+AADIVF  G  +   G
Sbjct:    3 RHIILDCDPGHDDAIALILALAHPDLVPLAVTTSAGNQTPDKTLNNALRILTLLNRGDIPVAGGATKPLTR--ELIIADNVHGETGLDGPALPEPSFSPQAITAVELMAQQIRQSTQPVTLVPTGPLTNIALLLASHSELHPKIERIVLMGGAAGV-GNWTPAAEFNIFVDPEAADIVFKSGIPITMCG 188          
BLAST of EY679918 vs. ExPASy Swiss-Prot
Match: RIHC_KLEP7 (Non-specific ribonucleoside hydrolase rihC OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=rihC PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.172e-30
Identity = 82/187 (43.85%), Postives = 114/187 (60.96%), Query Frame = 2
Query:   59 IIIDTDPGVDDAMAILLALRSPEVEVIGLTTIYGNVYTTLATRNALHLLEIAGRTDIPVAEGSHVTITQGTKLRIADFVHGADGLGNQNFHPPKGKPIAQSAADFIVEQANLYPGKITVVALGPLTNIALAIQQDPAFVKNIGQIVILGGAFAVNGNVNPAAEANIFGDPDAADIVFTCGADVVGVG 619
            II+DTDPG+DDA AI  AL +PE+++  +TT+ GNV     TRNAL LL      D+P+A+G+ + + +   LR A  VHG  G+   +F   + +P+A+ A   I +        IT+VA+GPLTNIAL + Q P  V NI ++VI+GG+ A  GN  P AE NI  DP+AA  VF  G ++V  G
Sbjct:    5 IILDTDPGIDDAAAIAAALFAPELDLQLMTTVAGNVSVEKTTRNALQLLHF-WNADVPLAQGASMPLVR--PLRDAASVHGESGMEGYDFVEHQRQPLAKPAFQAIRDALMHAAEPITLVAIGPLTNIALLLTQYPECVFNIRRLVIMGGS-AGRGNFTPNAEFNIAIDPEAAAKVFHSGLEIVMCG 187          
The following BLAST results are available for this feature:
BLAST of EY679918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
RIHA_ECO572.465e-3042.25Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_ECO552.465e-3042.25Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_ECO242.465e-3042.25Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHC_KLEP33.219e-3044.39Non-specific ribonucleoside hydrolase rihC OS=Kleb... [more]
RIHA_SALNS4.205e-3042.25Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SALDC4.205e-3042.25Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_ECOL54.205e-3042.25Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_ECO814.205e-3042.25Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHA_SHEB55.492e-3042.33Pyrimidine-specific ribonucleoside hydrolase rihA ... [more]
RIHC_KLEP77.172e-3043.85Non-specific ribonucleoside hydrolase rihC OS=Kleb... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-D11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679918 ID=EY679918; Name=EY679918; organism=Citrus sinensis; type=EST; length=899bp
TCATTTGAGTCGAATCCAAAAGAAAAGAAAGAAAATAATGGCAACAGAAC
CGAAGAAGATCATCATTGACACTGACCCTGGTGTTGATGATGCCATGGCT
ATACTTCTGGCCTTGAGGTCACCTGAAGTGGAGGTTATTGGACTTACTAC
AATTTATGGCAACGTTTATACAACTCTTGCCACCAGGAACGCCTTGCATT
TGTTGGAGATTGCAGGGAGGACTGATATCCCGGTGGCTGAAGGATCCCAT
GTCACCATCACCCAAGGTACAAAACTTCGCATTGCTGATTTTGTCCATGG
TGCTGACGGACTTGGCAACCAGAATTTCCATCCACCAAAAGGGAAGCCAA
TTGCACAGTCAGCAGCTGATTTTATTGTTGAGCAAGCAAATCTTTACCCT
GGGAAAATTACTGTGGTTGCATTGGGGCCACTAACAAATATTGCATTGGC
TATTCAACAAGATCCTGCATTTGTTAAAAACATTGGGCAGATAGTTATTC
TTGGTGGTGCTTTTGCAGTAAATGGGAATGTTAACCCAGCAGCAGAGGCC
AATATTTTTGGTGATCCAGATGCTGCAGATATTGTATTCACATGTGGAGC
AGATGTTGTGGGTGTGGGGTATTAATGTTACGCATCAATTTGTTATGAAC
AGATGCTGATAAAAAACATTTGGTTTGTTCAAATGGAAAACATGCCCCAT
TATTTATGCCAAATCTTAAGGGCCTCTTCCCCTTACCTCATGGAGGCCTA
ACATAACAAAAGGGGGTTTAACCTTCTGGAATCCCACACCTCTTCTTAAA
GCTTGTTAACCCTTCCCTTATTTCCCCTTTAACGGGGAAGGGCCTTCTTT
TTAAATCCCAAAACTAAGGGGGCTTTTAAAAGGGGGAGACCCCCATTTT
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