EY744779

Overview
NameEY744779
Unique NameEY744779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPH_YEAST (T-complex protein 1 subunit eta OS=Saccharomyces cerevisiae GN=CCT7 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.022e-15
Identity = 44/124 (35.48%), Postives = 71/124 (57.26%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAIN 515
            +LKEG     G  + ++ NI+AC  +    + +LGP G + +++    K  ++ND ATI+  L+V HPAAK LV   +AQ  E+GDG       AGE+++ A+  +  G+    I+ GY KA++
Sbjct:   12 VLKEGTDASQGKGQ-IISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVS 134          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.022e-15
Identity = 39/108 (36.11%), Postives = 62/108 (57.41%), Query Frame = 3
Query:  198 NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKT 521
            NI A + ++   RTSLGP GM+KM+     ++ ++ND  TI+ ++ + HP AK+LV    AQ  E GDG    +   G +L  A+ L+  G+HP+ I   + KA  ++
Sbjct:   25 NIVAARAVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVAKMLVDVSAAQDSEAGDGTTSVVILTGALLGAADRLLNKGIHPTIIAESFQKAARRS 132          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPB_DICDI (T-complex protein 1 subunit beta OS=Dictyostelium discoideum GN=cct2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.022e-15
Identity = 39/100 (39.00%), Postives = 68/100 (68.00%), Query Frame = 3
Query:  219 LSTITRTSLGPNGMNKMVIN--HLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAI 512
            ++ + +T+LGP GM+K++I+  + ++L +TND ATI+ ++ + +PAAK+LV   + Q +E+GDG       AGE+L+  E L++  +HP  IISG+  A+
Sbjct:   34 ITDLVKTTLGPKGMDKILISASNPNELIITNDGATILTKIYIDNPAAKILVDISRTQDDEVGDGTTSVCVLAGELLREGERLVQQKVHPQTIISGWRLAL 133          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPE_ARATH (T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana GN=At1g24510 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.335e-15
Identity = 46/114 (40.35%), Postives = 68/114 (59.65%), Query Frame = 3
Query:  168 MSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            + G+D A   NI A K ++ I R+SLGP GM+KM+      + +TND ATI+ +++V +  AKL+V   ++Q  EIGDG    +  AG +L+ AE  +  G+HP  I  GY  A
Sbjct:   24 LRGID-AQKANIAAGKAVARILRSSLGPKGMDKMLQGPDGDITITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMA 136          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPE_ENCCU (T-complex protein 1 subunit epsilon OS=Encephalitozoon cuniculi GN=CCT5 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.743e-15
Identity = 40/107 (37.38%), Postives = 68/107 (63.55%), Query Frame = 3
Query:  183 EAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEV-QHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGY 500
            + +L NI   + ++T   TSLGP GM+K++ +  + + VTND ATI+ E+E+ ++P ++L+V   ++Q EEIGDG    +  A  +L  A+ L+  G+HP +I  G+
Sbjct:   28 QCILANIGVVRSIATFLSTSLGPTGMDKILQSKDEDIVVTNDGATILKEMEMTENPISRLIVQLSESQDEEIGDGTTSVVVLASALLDQAQALLGQGVHPIKISEGF 134          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPD_ASHGO (T-complex protein 1 subunit delta OS=Ashbya gossypii GN=CCT4 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.743e-15
Identity = 39/104 (37.50%), Postives = 61/104 (58.65%), Query Frame = 3
Query:  198 NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            NI A + ++   RTSLGP GM+KM+     ++ ++ND  TI+ ++ + HP AK+LV    AQ  E GDG    +   G +L  AE+L+  G+HP+ I   + +A
Sbjct:   25 NIIAARAVADAIRTSLGPKGMDKMIKTARGEILISNDGHTILKQMAILHPVAKMLVEVSAAQDSEAGDGTTSVVILTGALLGAAEKLLAKGIHPTIIAESFQRA 128          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.277e-15
Identity = 38/108 (35.19%), Postives = 61/108 (56.48%), Query Frame = 3
Query:  198 NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKT 521
            NI A + ++   RTSLGP GM+KM+     ++ ++ND  TI+ ++ + HP A++LV    AQ  E GDG    +   G +L  AE L+  G+HP+ I   +  A  ++
Sbjct:   24 NIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRS 131          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPD_KLULA (T-complex protein 1 subunit delta OS=Kluyveromyces lactis GN=CCT4 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.277e-15
Identity = 39/108 (36.11%), Postives = 62/108 (57.41%), Query Frame = 3
Query:  198 NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKT 521
            NI A + ++   RTSLGP GM+KM+      + ++ND  TI+ ++ + HP AK+LV    AQ  E GDG    +   G +L  AE+L+  G+HP+ I   + +A  ++
Sbjct:   26 NIIAARAVADAIRTSLGPKGMDKMIKTSRGDIIISNDGHTILKQMAILHPVAKMLVEVSGAQDVEAGDGTTSVVIMTGALLGAAEKLLNKGIHPTIIAESFQRAAERS 133          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPG_DICDI (T-complex protein 1 subunit gamma OS=Dictyostelium discoideum GN=cct3 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.651e-15
Identity = 38/103 (36.89%), Postives = 60/103 (58.25%), Query Frame = 3
Query:  207 ACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAIN 515
            A K +++I +T LGP  M KM+++ +    VTND   I+ E++V HPAAK ++   +AQ E +GDG    +  A E+L  +E  I   +HP  II  +  A++
Sbjct:   27 AVKSVASIIKTCLGPKAMLKMILDPMGTTVVTNDGNAILREIDVTHPAAKSMIELSRAQDENVGDGTTSVVILAAEVLASSELFIEKKIHPHYIIKAFRMALD 129          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.651e-15
Identity = 46/137 (33.58%), Postives = 78/137 (56.93%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDK----LFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTH*NLRRT 542
            +LK+  +   G + A L +      +  + +++LGP GM+K++I+   +    + VTND ATI+  + V +PAAK+LV     Q  E+GDG       A E+L+ AE+L+   +HP  IISGY +A+     +L+++
Sbjct:    6 ILKDNAQEERG-ESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKKS 141          
The following BLAST results are available for this feature:
BLAST of EY744779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
TCPH_YEAST1.022e-1535.48T-complex protein 1 subunit eta OS=Saccharomyces c... [more]
TCPD_CANGA1.022e-1536.11T-complex protein 1 subunit delta OS=Candida glabr... [more]
TCPB_DICDI1.022e-1539.00T-complex protein 1 subunit beta OS=Dictyostelium ... [more]
TCPE_ARATH1.335e-1540.35T-complex protein 1 subunit epsilon OS=Arabidopsis... [more]
TCPE_ENCCU1.743e-1537.38T-complex protein 1 subunit epsilon OS=Encephalito... [more]
TCPD_ASHGO1.743e-1537.50T-complex protein 1 subunit delta OS=Ashbya gossyp... [more]
TCPD_YEAST2.277e-1535.19T-complex protein 1 subunit delta OS=Saccharomyces... [more]
TCPD_KLULA2.277e-1536.11T-complex protein 1 subunit delta OS=Kluyveromyces... [more]
TCPG_DICDI8.651e-1536.89T-complex protein 1 subunit gamma OS=Dictyostelium... [more]
TCPB_CAEEL8.651e-1533.58T-complex protein 1 subunit beta OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-D11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744779 ID=EY744779; Name=EY744779; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGCTAGGGATTTCGGGTTCATTTCTCCTCTCTCTGAATCAA
AACCTTGTAAAAGAGAAAAGAAAAAAGAAAAAATCAAGTGACGAAGAGAA
AAAAAAAATGGGATTTTCAATGCAACCGTATGGGATACAGTCAATGCTCA
AAGAAGGGCACAAGCACATGTCAGGTCTCGACGAAGCTGTGCTAAAAAAC
ATCGATGCTTGCAAACAGCTTTCTACTATCACTCGCACTTCTCTTGGACC
CAATGGTATGAATAAGATGGTTATCAATCATTTAGACAAACTTTTTGTCA
CAAATGATGCTGCGACTATTGTTAATGAACTTGAGGTTCAGCATCCTGCT
GCCAAGCTTTTGGTCTTAGCTGGAAAGGCTCAACAGGAAGAAATTGGTGA
TGGGGCCAATTTGACAATCTCGTTTGCTGGGGAAATTCTACAGGGTGCAG
AGGAGCTTATAAGGATGGGCCTACACCCTAGTGAGATCATCAGTGGATAC
ACTAAGGCGATCAATAAGACCCATTGAAATCTTAGAAGAACTGGTGGAGG
AAGGTTCTGAAAATATGGATGTTAGAAATACGGAGGAAGTTATTTATCGA
ATGAAGGCTGCTGTTGCTAACAAGCAATTTGGCCAAGAGGAAATTTTGTG
GCCCCTTTATGCTGAAGCATGCATCCAAGTTTGCCCCCAAAAACCCACCC
AACTTTTAACTTTGACAATGGTTCGGGTTGCAAAACTTTCGGGGAGGAGG
GTTGCCCAATTCCAACATTGGTCTCGGGAAAGGGTTTTAAAAAAAGAGAG
CTGGTGGAATATATCCAAAAAATAGGGAAAAGGGCACAAGTGTGGGGTGT
TTTGCCTGCGGGGGGGTGTTAAACCCTCCCGCCAAATTGGAAAAATTAAA
GGAACACT
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