EY744779

Overview
NameEY744779
Unique NameEY744779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPZ_CAEEL (T-complex protein 1 subunit zeta OS=Caenorhabditis elegans GN=cct-6 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.130e-14
Identity = 38/108 (35.19%), Postives = 61/108 (56.48%), Query Frame = 3
Query:  198 NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKT 521
            NI   + L  + R++LGP G  KM+++    + +T D   +++E+ +QHP A ++  A  AQ +  GDG   T+   GE+L+ AE L+  GLHP  +  G+  A  KT
Sbjct:   23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKT 130          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPZ_RABIT (T-complex protein 1 subunit zeta OS=Oryctolagus cuniculus GN=CCT6 PE=2 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14
Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = 3
Query:  186 AVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            A+  NI A + L  + RT+LGP G  KM+++    + +T D   +++E+++QHP A L+     AQ +  GDG    +   GE+L+ A+  I  GLHP  I  G+  A  K
Sbjct:   19 ALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEK 129          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPZ_PONAB (T-complex protein 1 subunit zeta OS=Pongo abelii GN=CCT6 PE=2 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14
Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = 3
Query:  186 AVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            A+  NI A + L  + RT+LGP G  KM+++    + +T D   +++E+++QHP A L+     AQ +  GDG    +   GE+L+ A+  I  GLHP  I  G+  A  K
Sbjct:   19 ALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEK 129          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPZ_MOUSE (T-complex protein 1 subunit zeta OS=Mus musculus GN=Cct6a PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14
Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = 3
Query:  186 AVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            A+  NI A + L  + RT+LGP G  KM+++    + +T D   +++E+++QHP A L+     AQ +  GDG    +   GE+L+ A+  I  GLHP  I  G+  A  K
Sbjct:   19 ALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEK 129          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPZ_HUMAN (T-complex protein 1 subunit zeta OS=Homo sapiens GN=CCT6A PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14
Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = 3
Query:  186 AVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            A+  NI A + L  + RT+LGP G  KM+++    + +T D   +++E+++QHP A L+     AQ +  GDG    +   GE+L+ A+  I  GLHP  I  G+  A  K
Sbjct:   19 ALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEK 129          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPZ_BOVIN (T-complex protein 1 subunit zeta OS=Bos taurus GN=CCT6A PE=2 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14
Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = 3
Query:  186 AVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            A+  NI A + L  + RT+LGP G  KM+++    + +T D   +++E+++QHP A L+     AQ +  GDG    +   GE+L+ A+  I  GLHP  I  G+  A  K
Sbjct:   19 ALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEK 129          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPG_ENCCU (T-complex protein 1 subunit gamma OS=Encephalitozoon cuniculi GN=CCT3 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.294e-14
Identity = 37/102 (36.27%), Postives = 58/102 (56.86%), Query Frame = 3
Query:  207 ACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAI 512
            A K +S++ RT LGP  M KMV+  ++ + +TND   I+ EL+V HP+A+ L+   K Q +E+GDG    +  A EIL     ++   +HP  I     +A+
Sbjct:   27 AAKTISSVIRTCLGPRAMQKMVLTKINSIELTNDGNAILRELDVAHPSARSLIELAKTQDDEVGDGTTSVVLLAAEILNEMTYILDRDVHPIRICKALGRAL 128          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPB_MOUSE (T-complex protein 1 subunit beta OS=Mus musculus GN=Cct2 PE=1 SV=4)

HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14
Identity = 40/99 (40.40%), Postives = 62/99 (62.63%), Query Frame = 3
Query:  219 LSTITRTSLGPNGMNKMVIN--HLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            +  + +++LGP GM+K++++      L VTND ATI+  + V +PAAK+LV   + Q +E+GDG       A E+L+ AE LI   +HP  IISG+ +A
Sbjct:   35 IGDLVKSTLGPKGMDKILLSSGRDAALMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIISGWREA 133          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPZ_SCHPO (T-complex protein 1 subunit zeta OS=Schizosaccharomyces pombe GN=cct6 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.565e-14
Identity = 39/112 (34.82%), Postives = 62/112 (55.36%), Query Frame = 3
Query:  183 EAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            +A+  NI A   L  + +++LGP G  KM+++    + +T D   ++ E+++Q+P A  +  A  AQ +  GDG        GE+L+ AE  IR GLHPS I  G+  A N+
Sbjct:   16 QALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNE 127          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPZ_CHICK (T-complex protein 1 subunit zeta OS=Gallus gallus GN=CCT6 PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 1.249e-13
Identity = 38/111 (34.23%), Postives = 60/111 (54.05%), Query Frame = 3
Query:  186 AVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            A+  NI A + L  + RT+LGP G  KM+++    + +T D   ++ E+++QHP A L+     AQ +  GDG    +   GE+L+ A+  I  GLHP  +  G+  A  K
Sbjct:   18 ALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLQEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIVAEGFEIAKEK 128          
The following BLAST results are available for this feature:
BLAST of EY744779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
TCPZ_CAEEL1.130e-1435.19T-complex protein 1 subunit zeta OS=Caenorhabditis... [more]
TCPZ_RABIT4.294e-1435.14T-complex protein 1 subunit zeta OS=Oryctolagus cu... [more]
TCPZ_PONAB4.294e-1435.14T-complex protein 1 subunit zeta OS=Pongo abelii G... [more]
TCPZ_MOUSE4.294e-1435.14T-complex protein 1 subunit zeta OS=Mus musculus G... [more]
TCPZ_HUMAN4.294e-1435.14T-complex protein 1 subunit zeta OS=Homo sapiens G... [more]
TCPZ_BOVIN4.294e-1435.14T-complex protein 1 subunit zeta OS=Bos taurus GN=... [more]
TCPG_ENCCU4.294e-1436.27T-complex protein 1 subunit gamma OS=Encephalitozo... [more]
TCPB_MOUSE7.324e-1440.40T-complex protein 1 subunit beta OS=Mus musculus G... [more]
TCPZ_SCHPO9.565e-1434.82T-complex protein 1 subunit zeta OS=Schizosaccharo... [more]
TCPZ_CHICK1.249e-1334.23T-complex protein 1 subunit zeta OS=Gallus gallus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-D11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744779 ID=EY744779; Name=EY744779; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGCTAGGGATTTCGGGTTCATTTCTCCTCTCTCTGAATCAA
AACCTTGTAAAAGAGAAAAGAAAAAAGAAAAAATCAAGTGACGAAGAGAA
AAAAAAAATGGGATTTTCAATGCAACCGTATGGGATACAGTCAATGCTCA
AAGAAGGGCACAAGCACATGTCAGGTCTCGACGAAGCTGTGCTAAAAAAC
ATCGATGCTTGCAAACAGCTTTCTACTATCACTCGCACTTCTCTTGGACC
CAATGGTATGAATAAGATGGTTATCAATCATTTAGACAAACTTTTTGTCA
CAAATGATGCTGCGACTATTGTTAATGAACTTGAGGTTCAGCATCCTGCT
GCCAAGCTTTTGGTCTTAGCTGGAAAGGCTCAACAGGAAGAAATTGGTGA
TGGGGCCAATTTGACAATCTCGTTTGCTGGGGAAATTCTACAGGGTGCAG
AGGAGCTTATAAGGATGGGCCTACACCCTAGTGAGATCATCAGTGGATAC
ACTAAGGCGATCAATAAGACCCATTGAAATCTTAGAAGAACTGGTGGAGG
AAGGTTCTGAAAATATGGATGTTAGAAATACGGAGGAAGTTATTTATCGA
ATGAAGGCTGCTGTTGCTAACAAGCAATTTGGCCAAGAGGAAATTTTGTG
GCCCCTTTATGCTGAAGCATGCATCCAAGTTTGCCCCCAAAAACCCACCC
AACTTTTAACTTTGACAATGGTTCGGGTTGCAAAACTTTCGGGGAGGAGG
GTTGCCCAATTCCAACATTGGTCTCGGGAAAGGGTTTTAAAAAAAGAGAG
CTGGTGGAATATATCCAAAAAATAGGGAAAAGGGCACAAGTGTGGGGTGT
TTTGCCTGCGGGGGGGTGTTAAACCCTCCCGCCAAATTGGAAAAATTAAA
GGAACACT
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