EY744779

Overview
NameEY744779
Unique NameEY744779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPG_PIG (T-complex protein 1 subunit gamma (Fragment) OS=Sus scrofa GN=CCT3 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.381e-12
Identity = 35/82 (42.68%), Postives = 52/82 (63.41%), Query Frame = 3
Query:  204 DACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGA 449
            +A K ++ I RT LGP  M KM+++ +  + +TND   I+ E++VQHPAAK ++   + Q EE+GDG    I  AGE+L  A
Sbjct:    1 NAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVA 82          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPW_MOUSE (T-complex protein 1 subunit zeta-2 OS=Mus musculus GN=Cct6b PE=2 SV=4)

HSP 1 Score: 73.559 bits (179), Expect = 1.804e-12
Identity = 37/111 (33.33%), Postives = 59/111 (53.15%), Query Frame = 3
Query:  186 AVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            A+  NI A + L  + R +LGP G  KM+++    + +T D   +++E+++QHP A ++     AQ    GDG    +   GE+L+ A+  I  GLHP  I  G+  A  K
Sbjct:   19 ALAVNICAARGLQDVLRPTLGPKGALKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASIIAKVAAAQDHVTGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFDVAKTK 129          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.855e-12
Identity = 38/96 (39.58%), Postives = 60/96 (62.50%), Query Frame = 3
Query:  228 ITRTSLGPNGMNKMVIN-HLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELI-RMGLHPSEIISGYTKA 509
            + +++LGP GM+K++ +   +   VTND ATI+  + + +PAAK+LV   K Q +E+GDG       + E+L+ AE+LI +  +HP  II GY  A
Sbjct:   32 LVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLA 127          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPH_ENCCU (T-complex protein 1 subunit eta OS=Encephalitozoon cuniculi GN=CCT7 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.605e-11
Identity = 32/92 (34.78%), Postives = 54/92 (58.70%), Query Frame = 3
Query:  189 VLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIR 464
            V+ N+D C +++    ++LGP GM+K+      ++ VTND ATI+  + ++HP  +LLV   ++Q  E+GDG    +    EIL   + LI+
Sbjct:   21 VVSNVDVCTKIAEFLESTLGPYGMDKLFAGK--EIVVTNDGATILKHMNIRHPVGRLLVALSESQDSEVGDGTTSVVILTTEILSCLKPLIK 110          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPH_TETTH (T-complex protein 1 subunit eta (Fragment) OS=Tetrahymena thermophila PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.443e-11
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 3
Query:  303 NDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAI 512
            ND ATI+N L++ HPAAK LV   KAQ +E+GDG       AGE+L+ ++  I  G+HP  I  GY +A+
Sbjct:    1 NDGATILNLLDIVHPAAKTLVDIAKAQDDEVGDGTTSVCLLAGELLKESKYFIEEGMHPQIITKGYKEAL 70          
The following BLAST results are available for this feature:
BLAST of EY744779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
TCPG_PIG1.381e-1242.68T-complex protein 1 subunit gamma (Fragment) OS=Su... [more]
TCPW_MOUSE1.804e-1233.33T-complex protein 1 subunit zeta-2 OS=Mus musculus... [more]
TCPB_YEAST6.855e-1239.58T-complex protein 1 subunit beta OS=Saccharomyces ... [more]
TCPH_ENCCU2.605e-1134.78T-complex protein 1 subunit eta OS=Encephalitozoon... [more]
TCPH_TETTH4.443e-1147.14T-complex protein 1 subunit eta (Fragment) OS=Tetr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-D11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744779 ID=EY744779; Name=EY744779; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGCTAGGGATTTCGGGTTCATTTCTCCTCTCTCTGAATCAA
AACCTTGTAAAAGAGAAAAGAAAAAAGAAAAAATCAAGTGACGAAGAGAA
AAAAAAAATGGGATTTTCAATGCAACCGTATGGGATACAGTCAATGCTCA
AAGAAGGGCACAAGCACATGTCAGGTCTCGACGAAGCTGTGCTAAAAAAC
ATCGATGCTTGCAAACAGCTTTCTACTATCACTCGCACTTCTCTTGGACC
CAATGGTATGAATAAGATGGTTATCAATCATTTAGACAAACTTTTTGTCA
CAAATGATGCTGCGACTATTGTTAATGAACTTGAGGTTCAGCATCCTGCT
GCCAAGCTTTTGGTCTTAGCTGGAAAGGCTCAACAGGAAGAAATTGGTGA
TGGGGCCAATTTGACAATCTCGTTTGCTGGGGAAATTCTACAGGGTGCAG
AGGAGCTTATAAGGATGGGCCTACACCCTAGTGAGATCATCAGTGGATAC
ACTAAGGCGATCAATAAGACCCATTGAAATCTTAGAAGAACTGGTGGAGG
AAGGTTCTGAAAATATGGATGTTAGAAATACGGAGGAAGTTATTTATCGA
ATGAAGGCTGCTGTTGCTAACAAGCAATTTGGCCAAGAGGAAATTTTGTG
GCCCCTTTATGCTGAAGCATGCATCCAAGTTTGCCCCCAAAAACCCACCC
AACTTTTAACTTTGACAATGGTTCGGGTTGCAAAACTTTCGGGGAGGAGG
GTTGCCCAATTCCAACATTGGTCTCGGGAAAGGGTTTTAAAAAAAGAGAG
CTGGTGGAATATATCCAAAAAATAGGGAAAAGGGCACAAGTGTGGGGTGT
TTTGCCTGCGGGGGGGTGTTAAACCCTCCCGCCAAATTGGAAAAATTAAA
GGAACACT
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