EY744779

Overview
NameEY744779
Unique NameEY744779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.020e-23
Identity = 56/125 (44.80%), Postives = 81/125 (64.80%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            +L EG +   G D   L NI A + ++   RT+LGP GM+KM+++ L  + +TND ATI++E+++QHPAAK++V   K Q +E GDG    +  AGE+L+ AEEL+   +HPS II GY  A  K
Sbjct:   11 ILPEGTQRYVGRDAQRL-NILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEK 134          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: THS_PYRAB (Thermosome subunit OS=Pyrococcus abyssi GN=ths PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.739e-23
Identity = 55/125 (44.00%), Postives = 81/125 (64.80%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            +L EG +   G D A   NI A + ++   RT+LGP GM+KM+++ L  + +TND ATI++E+++QHPAAK++V   K Q +E GDG    +  AGE+L+ AEEL+   +HPS +I GY  A  K
Sbjct:   11 ILPEGTQRYVGRD-AQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIVIKGYMLAAEK 134          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.739e-23
Identity = 56/125 (44.80%), Postives = 81/125 (64.80%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            +L EG +   G D   L NI A + ++   RT+LGP GM+KM+++ L  + +TND ATI++E+++QHPAAK++V   K Q +E GDG    +  AGE+L+ AEEL+   +HPS II GY  A  K
Sbjct:   11 ILPEGTQRYVGRDAQRL-NILAARIVAETIRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYALAAEK 134          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: THS_METJA (Thermosome subunit OS=Methanocaldococcus jannaschii GN=ths PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.271e-23
Identity = 56/125 (44.80%), Postives = 81/125 (64.80%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            +L +  K   G D A   NI A + ++   RT+LGP GM+KM+++ L  + VTND  TI+ E+ V+HPAAK+L+   K Q++E+GDG    +  AGE+L+ AEEL+   +HPS II+GY  A NK
Sbjct:   10 VLPQNVKRYVGRD-AQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEMARNK 133          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: THSB_SULAC (Thermosome subunit beta OS=Sulfolobus acidocaldarius GN=thsB PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.966e-23
Identity = 55/122 (45.08%), Postives = 81/122 (66.39%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            +LKEG     G  EA+  NI A K +    +T+ GP GM+KM+++ L  + +TND ATI++++++QHPAAKLLV   K Q EE  DG    + F+GE+++ AEEL+   +HP+ I+SGY KA
Sbjct:   18 ILKEGSSRTYG-KEALRINIAAVKAVEEALKTTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEELLYKEIHPTIIVSGYKKA 138          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: THSB_METTH (Thermosome subunit beta OS=Methanobacterium thermoautotrophicum GN=thsB PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.966e-23
Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            +L EG     G D A   NI A K L+   RT+LGP GM+KM+++ L  + VTND  TI+ E++++HPAAK+LV   K Q++E+GDG    +  AGE+L+ AE L+ M +HP+ I  GY +A  K
Sbjct:   10 VLPEGTSRYLGRD-AQRMNILAGKILAETVRTTLGPKGMDKMLVDSLGDIVVTNDGVTILKEMDIEHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKKAENLLEMEIHPTIIAMGYRQAAEK 133          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: THSA_THEAC (Thermosome subunit alpha OS=Thermoplasma acidophilum GN=thsA PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.966e-23
Identity = 51/125 (40.80%), Postives = 83/125 (66.40%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            +LKEG +   G + A   NI+A K ++   RT+LGP GM+KM+++ +  + ++ND ATI+ E++V+HP AK++V   KAQ   +GDG    +  +GE+L+ AE L+  G+HP+ I +GY  A+N+
Sbjct:   10 VLKEGTQREQGKN-AQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNE 133          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: THS_METKA (Thermosome subunit OS=Methanopyrus kandleri GN=ths PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.874e-23
Identity = 51/125 (40.80%), Postives = 82/125 (65.60%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            +L EG++   G D A   NI A + ++   RT+LGP GM+KM+++ +  + VTND  TI+ E++++HPAAK++V   K Q++E+GDG    +  AGE+L  AE+L++  +HP+ I  GY  A+ K
Sbjct:   13 ILPEGYQRFVGRD-AQRMNIMAARVVAETVRTTLGPMGMDKMLVDEMGDVVVTNDGVTILEEMDIEHPAAKMVVEVAKTQEDEVGDGTTTAVVLAGELLHKAEDLLQQDIHPTVIARGYRMAVEK 136          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.874e-23
Identity = 56/125 (44.80%), Postives = 81/125 (64.80%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            +L EG +   G D   L NI A + ++   RT+LGP GM+KM+++ L  + VTND ATI++++++QHPAAK++V   K Q +E GDG    +  AGE+L+ AEEL+   +HPS II GY  A  K
Sbjct:   11 ILPEGTQRYVGRDAQRL-NILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEK 134          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.874e-23
Identity = 56/125 (44.80%), Postives = 81/125 (64.80%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            +L EG +   G D   L NI A + ++   RT+LGP GM+KM+++ L  + VTND ATI++++++QHPAAK++V   K Q +E GDG    +  AGE+L+ AEEL+   +HPS II GY  A  K
Sbjct:   11 ILPEGTQRYVGRDAQRL-NILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEK 134          
The following BLAST results are available for this feature:
BLAST of EY744779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
THSB_PYRKO1.020e-2344.80Thermosome subunit beta OS=Pyrococcus kodakaraensi... [more]
THS_PYRAB1.739e-2344.00Thermosome subunit OS=Pyrococcus abyssi GN=ths PE=... [more]
THS_DESSY1.739e-2344.80Thermosome subunit OS=Desulfurococcus sp. (strain ... [more]
THS_METJA2.271e-2344.80Thermosome subunit OS=Methanocaldococcus jannaschi... [more]
THSB_SULAC2.966e-2345.08Thermosome subunit beta OS=Sulfolobus acidocaldari... [more]
THSB_METTH2.966e-2344.80Thermosome subunit beta OS=Methanobacterium thermo... [more]
THSA_THEAC2.966e-2340.80Thermosome subunit alpha OS=Thermoplasma acidophil... [more]
THS_METKA3.874e-2340.80Thermosome subunit OS=Methanopyrus kandleri GN=ths... [more]
THSA_THEK83.874e-2344.80Thermosome subunit alpha OS=Thermococcus sp. (stra... [more]
THSA_THEK13.874e-2344.80Thermosome subunit alpha OS=Thermococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-D11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744779 ID=EY744779; Name=EY744779; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGCTAGGGATTTCGGGTTCATTTCTCCTCTCTCTGAATCAA
AACCTTGTAAAAGAGAAAAGAAAAAAGAAAAAATCAAGTGACGAAGAGAA
AAAAAAAATGGGATTTTCAATGCAACCGTATGGGATACAGTCAATGCTCA
AAGAAGGGCACAAGCACATGTCAGGTCTCGACGAAGCTGTGCTAAAAAAC
ATCGATGCTTGCAAACAGCTTTCTACTATCACTCGCACTTCTCTTGGACC
CAATGGTATGAATAAGATGGTTATCAATCATTTAGACAAACTTTTTGTCA
CAAATGATGCTGCGACTATTGTTAATGAACTTGAGGTTCAGCATCCTGCT
GCCAAGCTTTTGGTCTTAGCTGGAAAGGCTCAACAGGAAGAAATTGGTGA
TGGGGCCAATTTGACAATCTCGTTTGCTGGGGAAATTCTACAGGGTGCAG
AGGAGCTTATAAGGATGGGCCTACACCCTAGTGAGATCATCAGTGGATAC
ACTAAGGCGATCAATAAGACCCATTGAAATCTTAGAAGAACTGGTGGAGG
AAGGTTCTGAAAATATGGATGTTAGAAATACGGAGGAAGTTATTTATCGA
ATGAAGGCTGCTGTTGCTAACAAGCAATTTGGCCAAGAGGAAATTTTGTG
GCCCCTTTATGCTGAAGCATGCATCCAAGTTTGCCCCCAAAAACCCACCC
AACTTTTAACTTTGACAATGGTTCGGGTTGCAAAACTTTCGGGGAGGAGG
GTTGCCCAATTCCAACATTGGTCTCGGGAAAGGGTTTTAAAAAAAGAGAG
CTGGTGGAATATATCCAAAAAATAGGGAAAAGGGCACAAGTGTGGGGTGT
TTTGCCTGCGGGGGGGTGTTAAACCCTCCCGCCAAATTGGAAAAATTAAA
GGAACACT
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