EY744779

Overview
NameEY744779
Unique NameEY744779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPA_ARATH (T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.307e-22
Identity = 48/109 (44.04%), Postives = 76/109 (69.72%), Query Frame = 3
Query:  195 KNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKT 521
            +N+ AC+ +S I +TSLGP G++KM+++ +  + +TND ATI+  LEV+HPAAK+LV   + Q  E+GDG    +  A E+L+ A +L+R  +HP+ IISGY  A+ ++
Sbjct:   23 QNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRES 131          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPE_SCHPO (T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe GN=cct5 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.543e-22
Identity = 55/120 (45.83%), Postives = 80/120 (66.67%), Query Frame = 3
Query:  150 KEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            +E  + + G+D AV  +I A K ++ I RTSLGP G++K++I+   ++ VTND ATI++++EV+H  AKLLV   K+Q +EIGDG    +  AG +L+ AE LI  G+HP  I  GY KA
Sbjct:   24 QEKKRRLHGID-AVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKA 142          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.777e-21
Identity = 51/122 (41.80%), Postives = 77/122 (63.11%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            +LKEG     G  EA+  NI A K +    +++ GP GM+KM+++ L  + +TND ATI++++++QHP  KLLV   K Q EE  DG    +  AGE+ + AE+L+   +HP+ I+SGY KA
Sbjct:   17 ILKEGSSRTYG-KEALRANIAAVKAIEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKA 137          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPA_DROME (T-complex protein 1 subunit alpha OS=Drosophila melanogaster GN=T-cp1 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.626e-21
Identity = 47/102 (46.08%), Postives = 72/102 (70.59%), Query Frame = 3
Query:  195 KNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGY 500
            +N+ A   +S I ++SLGP G++KM+++ +  + VTND ATI+  LEV+HPAAK+LV   + Q EE+GDG    +  A E+L+ A+EL++  +HP+ IISGY
Sbjct:   23 QNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILRLLEVEHPAAKVLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGY 124          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: THSB_SULSH (Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.736e-21
Identity = 51/122 (41.80%), Postives = 76/122 (62.30%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            +LKEG     G  EA+  NI A K +    +++ GP GM+KM ++ L  + +TND ATI++++++QHP  KLLV   K Q EE  DG    +  AGE+ + AE+L+   +HP+ I+SGY KA
Sbjct:   17 ILKEGSSRTYG-KEALRANIAAVKAIEEALKSTYGPRGMDKMFVDSLGDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKA 137          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPH_PLAF7 (T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate 3D7) GN=PFC0350c PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.079e-21
Identity = 50/124 (40.32%), Postives = 79/124 (63.71%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAIN 515
            +LKEG     G  + +++NI+AC+ +  I +T+LGP GM+K++    D + +TND AT++N L + HPAA +LV   K+Q +E+GDG    +  AGE+L  A+ L+  G+ P+ II G+  A N
Sbjct:   11 LLKEGTDTAQGRSQ-IIRNINACQIIVDIVKTTLGPRGMDKLIYTERD-VTITNDGATVMNLLNISHPAASILVDIAKSQDDEVGDGTTSVVVVAGELLNEAKGLLNDGIEPNMIIDGFRNACN 132          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: THS3_HALVO (Thermosome subunit 3 OS=Halobacterium volcanii GN=cct3 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.378e-20
Identity = 50/122 (40.98%), Postives = 78/122 (63.93%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            +L EG     G   A   NI A K ++   RT+LGP GM+KM+++   ++ +TND ATI+ +++++HPAA++LV   + Q+EE+GDG        GE+L  AE+L+   LHP+ I+ GYT+A
Sbjct:   11 ILAEGTNRTHGRS-AQDSNIRAGKAVAEAVRTTLGPRGMDKMLVDSSGEVVITNDGATILEKMDIEHPAAQMLVEVSQTQEEEVGDGTTTAAVLTGELLAHAEDLLDDDLHPTVIVEGYTEA 131          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPG_XENLA (T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.350e-20
Identity = 53/127 (41.73%), Postives = 78/127 (61.42%), Query Frame = 3
Query:  138 QSMLKE-GHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAIN 515
            Q+M +E G K  SG       NI+A K ++ I RT LGP  M KM+++ +  + +TND   I+ E++VQHPAAK ++   + Q EE+GDG    I  AGE+L  AE+ +   +HP+ IIS Y KA++
Sbjct:   11 QNMKRESGRKVQSG-------NINAAKTIADIIRTCLGPRAMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEQFLEQQMHPTVIISAYRKALD 130          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.350e-20
Identity = 45/105 (42.86%), Postives = 73/105 (69.52%), Query Frame = 3
Query:  195 KNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            +N+ A   ++ I ++SLGP G++KM+++ +  + VTND ATI+ +LEV+HPA K+LV   + Q EE+GDG    +  A E+L+ A+EL++  +HP+ II+GY  A
Sbjct:   24 QNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLA 128          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.009e-20
Identity = 55/134 (41.04%), Postives = 84/134 (62.69%), Query Frame = 3
Query:  117 SMQPYGIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            S QP+ I    +E  K ++G+ EAV  +I A + ++   RTSLGP G++KM+++    + +TND ATI+ +++VQH  AKL+V   K+Q  EIGDG    +  AG +L+ AE+LI  G+HP +I  G+  A  K
Sbjct:   13 SGQPF-IVMREQENQKRITGV-EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKK 144          
The following BLAST results are available for this feature:
BLAST of EY744779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
TCPA_ARATH7.307e-2244.04T-complex protein 1 subunit alpha OS=Arabidopsis t... [more]
TCPE_SCHPO9.543e-2245.83T-complex protein 1 subunit epsilon OS=Schizosacch... [more]
THSB_SULSO2.777e-2141.80Thermosome subunit beta OS=Sulfolobus solfataricus... [more]
TCPA_DROME3.626e-2146.08T-complex protein 1 subunit alpha OS=Drosophila me... [more]
THSB_SULSH4.736e-2141.80Thermosome subunit beta OS=Sulfolobus shibatae GN=... [more]
TCPH_PLAF78.079e-2140.32T-complex protein 1 subunit eta OS=Plasmodium falc... [more]
THS3_HALVO1.378e-2040.98Thermosome subunit 3 OS=Halobacterium volcanii GN=... [more]
TCPG_XENLA2.350e-2041.73T-complex protein 1 subunit gamma OS=Xenopus laevi... [more]
TCPA_CAEEL2.350e-2042.86T-complex protein 1 subunit alpha OS=Caenorhabditi... [more]
TCPE_CAEEL4.009e-2041.04T-complex protein 1 subunit epsilon OS=Caenorhabdi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-D11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744779 ID=EY744779; Name=EY744779; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGCTAGGGATTTCGGGTTCATTTCTCCTCTCTCTGAATCAA
AACCTTGTAAAAGAGAAAAGAAAAAAGAAAAAATCAAGTGACGAAGAGAA
AAAAAAAATGGGATTTTCAATGCAACCGTATGGGATACAGTCAATGCTCA
AAGAAGGGCACAAGCACATGTCAGGTCTCGACGAAGCTGTGCTAAAAAAC
ATCGATGCTTGCAAACAGCTTTCTACTATCACTCGCACTTCTCTTGGACC
CAATGGTATGAATAAGATGGTTATCAATCATTTAGACAAACTTTTTGTCA
CAAATGATGCTGCGACTATTGTTAATGAACTTGAGGTTCAGCATCCTGCT
GCCAAGCTTTTGGTCTTAGCTGGAAAGGCTCAACAGGAAGAAATTGGTGA
TGGGGCCAATTTGACAATCTCGTTTGCTGGGGAAATTCTACAGGGTGCAG
AGGAGCTTATAAGGATGGGCCTACACCCTAGTGAGATCATCAGTGGATAC
ACTAAGGCGATCAATAAGACCCATTGAAATCTTAGAAGAACTGGTGGAGG
AAGGTTCTGAAAATATGGATGTTAGAAATACGGAGGAAGTTATTTATCGA
ATGAAGGCTGCTGTTGCTAACAAGCAATTTGGCCAAGAGGAAATTTTGTG
GCCCCTTTATGCTGAAGCATGCATCCAAGTTTGCCCCCAAAAACCCACCC
AACTTTTAACTTTGACAATGGTTCGGGTTGCAAAACTTTCGGGGAGGAGG
GTTGCCCAATTCCAACATTGGTCTCGGGAAAGGGTTTTAAAAAAAGAGAG
CTGGTGGAATATATCCAAAAAATAGGGAAAAGGGCACAAGTGTGGGGTGT
TTTGCCTGCGGGGGGGTGTTAAACCCTCCCGCCAAATTGGAAAAATTAAA
GGAACACT
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