EY744779

Overview
NameEY744779
Unique NameEY744779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPA_MONDO (T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.394e-19
Identity = 43/105 (40.95%), Postives = 70/105 (66.67%), Query Frame = 3
Query:  195 KNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            +N+ A   ++ I ++SLGP G++KM+++ +  + +TND ATI+  LEV+HPAAK+L      Q +E+GDG    +  A E+L+ A+EL++  +HP+ II GY  A
Sbjct:   20 QNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSIIGGYRLA 124          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.433e-19
Identity = 45/107 (42.06%), Postives = 67/107 (62.62%), Query Frame = 3
Query:  198 NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            NI A K ++   RTSLGP GM+KM+ +    + +TND ATI+ +++V HP+AK+LV   KAQ  E GDG    +  AG +L     L++ G+HP+ I   + KA++K
Sbjct:   34 NISAAKAVADAVRTSLGPKGMDKMIQDEKGDVTITNDGATILKQMQVLHPSAKMLVELSKAQDIEAGDGTTSVVVIAGALLDSCNRLLQRGIHPTIISESFQKAVDK 140          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPD_AEDTR (T-complex protein 1 subunit delta OS=Aedes triseriatus PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.433e-19
Identity = 52/133 (39.10%), Postives = 77/133 (57.89%), Query Frame = 3
Query:  120 MQPYGIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            M+P G      + +K  S   +    NI+A K +S   RTSLGP GM+KM+     ++ +TND ATI+ ++ V HPAAK+LV   +AQ  E GDG    +  AG +L+  E+L++MG+HP+ I   + K   K
Sbjct:   10 MKPQG------QAYKDKSKPADIRQSNINAAKAVSDAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMNVIHPAAKMLVELSRAQDVEAGDGTTSVVVVAGALLKAVEKLLQMGIHPTAISDAFQKCSAK 136          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPA2_MOUSE (T-complex protein 1 subunit alpha B OS=Mus musculus GN=Tcp1 PE=1 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 4.433e-19
Identity = 42/105 (40.00%), Postives = 70/105 (66.67%), Query Frame = 3
Query:  195 KNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            +N+ A   ++ I ++S GP G++KM+++ +  + +TND ATI+  LEV+HPAAK+L      Q +E+GDG    +  A E+L+ A+EL++  +HP+ +ISGY  A
Sbjct:   20 QNVMAAASIANIVKSSFGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLA 124          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPG_RAT (T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.789e-19
Identity = 48/122 (39.34%), Postives = 72/122 (59.02%), Query Frame = 3
Query:  150 KEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAIN 515
            + G K  SG       NI+A K ++ I RT LGP  M KM+++ +  + +TND   I+ E++VQHPAAK ++   + Q EE+GDG    I  AGE+L  AE  +   +HP+ +IS Y  A++
Sbjct:   17 ESGRKVQSG-------NINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMALD 131          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPG_MOUSE (T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.789e-19
Identity = 48/122 (39.34%), Postives = 72/122 (59.02%), Query Frame = 3
Query:  150 KEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAIN 515
            + G K  SG       NI+A K ++ I RT LGP  M KM+++ +  + +TND   I+ E++VQHPAAK ++   + Q EE+GDG    I  AGE+L  AE  +   +HP+ +IS Y  A++
Sbjct:   17 ESGRKVQSG-------NINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMALD 131          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.789e-19
Identity = 51/123 (41.46%), Postives = 78/123 (63.41%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLK-NIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            ML  G +  SG  E+V K N+ A    +   +TSLGP G++KM+++ +  + +TND ATI+  L+V+HPAAK+LV   + Q EE+GDG    +  A  +L+ A+ELI   +HP+ +I+GY  A
Sbjct:    1 MLTLGGERTSG--ESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLA 121          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPH_CHICK (T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.561e-19
Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 3
Query:  144 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 509
            +LKEG     G+ + V  NI+AC+ ++   RT+LGP GM+K++++   K  ++ND ATI+  L+V HPAAK LV   K+Q  E+GDG       A E L+  +  +  GLHP  II  +  A
Sbjct:    8 LLKEGTDTSQGIPQLV-SNINACQVIAEAVRTTLGPRGMDKLIVDDRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTA 128          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPG_MACFA (T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.561e-19
Identity = 48/122 (39.34%), Postives = 72/122 (59.02%), Query Frame = 3
Query:  150 KEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAIN 515
            + G K  SG       NI+A K ++ I RT LGP  M KM+++ +  + +TND   I+ E++VQHPAAK ++   + Q EE+G G    I  AGE+L  AE  +   +HP+ +IS Y KA++
Sbjct:   17 ESGRKVQSG-------NINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGGGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALD 131          
BLAST of EY744779 vs. ExPASy Swiss-Prot
Match: TCPA_YEAST (T-complex protein 1 subunit alpha OS=Saccharomyces cerevisiae GN=TCP1 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.561e-19
Identity = 47/121 (38.84%), Postives = 79/121 (65.29%), Query Frame = 3
Query:  156 GHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 518
            G + +SG D+   +N+ A   ++ + ++SLGP G++KM+++ +    VTND ATI++ L+VQHPA K+LV   + Q  EIGDG    +  A E+L+ A EL++  +HP+ II+G+  A+ +
Sbjct:   16 GGEKISG-DDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALRE 135          
The following BLAST results are available for this feature:
BLAST of EY744779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
TCPA_MONDO3.394e-1940.95T-complex protein 1 subunit alpha OS=Monodelphis d... [more]
TCPD_TAKRU4.433e-1942.06T-complex protein 1 subunit delta OS=Takifugu rubr... [more]
TCPD_AEDTR4.433e-1939.10T-complex protein 1 subunit delta OS=Aedes triseri... [more]
TCPA2_MOUSE4.433e-1940.00T-complex protein 1 subunit alpha B OS=Mus musculu... [more]
TCPG_RAT5.789e-1939.34T-complex protein 1 subunit gamma OS=Rattus norveg... [more]
TCPG_MOUSE5.789e-1939.34T-complex protein 1 subunit gamma OS=Mus musculus ... [more]
TCPA_SCHMA5.789e-1941.46T-complex protein 1 subunit alpha OS=Schistosoma m... [more]
TCPH_CHICK7.561e-1940.16T-complex protein 1 subunit eta OS=Gallus gallus G... [more]
TCPG_MACFA7.561e-1939.34T-complex protein 1 subunit gamma OS=Macaca fascic... [more]
TCPA_YEAST7.561e-1938.84T-complex protein 1 subunit alpha OS=Saccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-D11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744779 ID=EY744779; Name=EY744779; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGCTAGGGATTTCGGGTTCATTTCTCCTCTCTCTGAATCAA
AACCTTGTAAAAGAGAAAAGAAAAAAGAAAAAATCAAGTGACGAAGAGAA
AAAAAAAATGGGATTTTCAATGCAACCGTATGGGATACAGTCAATGCTCA
AAGAAGGGCACAAGCACATGTCAGGTCTCGACGAAGCTGTGCTAAAAAAC
ATCGATGCTTGCAAACAGCTTTCTACTATCACTCGCACTTCTCTTGGACC
CAATGGTATGAATAAGATGGTTATCAATCATTTAGACAAACTTTTTGTCA
CAAATGATGCTGCGACTATTGTTAATGAACTTGAGGTTCAGCATCCTGCT
GCCAAGCTTTTGGTCTTAGCTGGAAAGGCTCAACAGGAAGAAATTGGTGA
TGGGGCCAATTTGACAATCTCGTTTGCTGGGGAAATTCTACAGGGTGCAG
AGGAGCTTATAAGGATGGGCCTACACCCTAGTGAGATCATCAGTGGATAC
ACTAAGGCGATCAATAAGACCCATTGAAATCTTAGAAGAACTGGTGGAGG
AAGGTTCTGAAAATATGGATGTTAGAAATACGGAGGAAGTTATTTATCGA
ATGAAGGCTGCTGTTGCTAACAAGCAATTTGGCCAAGAGGAAATTTTGTG
GCCCCTTTATGCTGAAGCATGCATCCAAGTTTGCCCCCAAAAACCCACCC
AACTTTTAACTTTGACAATGGTTCGGGTTGCAAAACTTTCGGGGAGGAGG
GTTGCCCAATTCCAACATTGGTCTCGGGAAAGGGTTTTAAAAAAAGAGAG
CTGGTGGAATATATCCAAAAAATAGGGAAAAGGGCACAAGTGTGGGGTGT
TTTGCCTGCGGGGGGGTGTTAAACCCTCCCGCCAAATTGGAAAAATTAAA
GGAACACT
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