EY679820

Overview
NameEY679820
Unique NameEY679820
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1020
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: YBD6_YEAST (UPF0001 protein YBL036C OS=Saccharomyces cerevisiae GN=YBL036C PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.580e-21
Identity = 58/114 (50.88%), Postives = 76/114 (66.67%), Query Frame = 2
Query:  149 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNYRGEESKSG 484
            +I ++ VSK KP S I+ +Y+ G R FGENYVQE++EKA  LPDD++WHFIG LQ+NK K  LA VPNL  VE++D+ K A +LN  R        P+   VQ+N   E+ KSG
Sbjct:   41 KILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPDDIKWHFIGGLQTNKCKD-LAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHEDQKSG 153          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: Y461_VIBCH (UPF0001 protein VC_0461 OS=Vibrio cholerae GN=VC_0461 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.169e-20
Identity = 57/137 (41.61%), Postives = 80/137 (58.39%), Query Frame = 2
Query:   89 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNYRGEESKSG 484
            +  +  ++  A ++  R    ++++AVSKTKPV  I +  +AG R FGENYVQE V+K     +      LEWHFIG LQSNK + +     +   V ++D EKIA RL+     +   PL+VL+QVN  GE SKSG
Sbjct:    8 IEHITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLSEQ-RPVNMPPLQVLIQVNTSGEASKSG 140          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: YGGS_ECOLI (UPF0001 protein yggS OS=Escherichia coli (strain K12) GN=yggS PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.344e-19
Identity = 59/136 (43.38%), Postives = 76/136 (55.88%), Query Frame = 2
Query:   89 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNYRGEESKSG 484
            L  V  ++  AA R  R P+ I ++AVSKTKP S I +  +AG R FGENYVQE V+K     +     LEWHFIG LQSNK + +     +     ++D  +IA RLN         PL VL+Q+N   E SKSG
Sbjct:    8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSG 139          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: YGGS_ECOL6 (UPF0001 protein yggS OS=Escherichia coli O6 GN=yggS PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.344e-19
Identity = 59/136 (43.38%), Postives = 76/136 (55.88%), Query Frame = 2
Query:   89 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNYRGEESKSG 484
            L  V  ++  AA R  R P+ I ++AVSKTKP S I +  +AG R FGENYVQE V+K     +     LEWHFIG LQSNK + +     +     ++D  +IA RLN         PL VL+Q+N   E SKSG
Sbjct:    8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSG 139          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: YGGS_ECO57 (UPF0001 protein yggS OS=Escherichia coli O157:H7 GN=yggS PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.344e-19
Identity = 59/136 (43.38%), Postives = 76/136 (55.88%), Query Frame = 2
Query:   89 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNYRGEESKSG 484
            L  V  ++  AA R  R P+ I ++AVSKTKP S I +  +AG R FGENYVQE V+K     +     LEWHFIG LQSNK + +     +     ++D  +IA RLN         PL VL+Q+N   E SKSG
Sbjct:    8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSG 139          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: Y274_AQUAE (UPF0001 protein aq_274 OS=Aquifex aeolicus GN=aq_274 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.163e-18
Identity = 53/133 (39.85%), Postives = 79/133 (59.40%), Query Frame = 2
Query:   89 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNYRGEESKSG 484
            L  V++R+ +A ER+ R  +  +++  SKT P  VIR+ Y  G + +GEN VQE ++K   L D DLEWHFIG LQ+NKVK L+  V    ++ S+D + +A  + +           VL++VN  GEE+K G
Sbjct:    7 LSRVLERIQKACERAGRGENCAKLLGASKTVPPEVIREFYNCGLKVYGENRVQEFLKKYEALKDLDLEWHFIGRLQTNKVKYLMGKV---VLIHSLDRKNLADEIQKRA-FKNNIVQDVLIEVNVGGEETKGG 135          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: PROSC_CAEEL (Proline synthetase co-transcribed bacterial homolog protein OS=Caenorhabditis elegans GN=F09E5.8 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.163e-18
Identity = 70/183 (38.25%), Postives = 96/183 (52.46%), Query Frame = 2
Query:   89 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR--KPLKVLVQVNYRGEESKSGS*AFRVVGELGE-----RW*VKTGPNLEFCGLLTTLGCQITHRTPE 607
            L ++I+ V  A   +S+   R R+VAVSKTK   +I   Y    R FGENYVQE+ EK+  L     D+ WHFIG +QSNK+   +   P L  VE+V+ EK A   ++     G    PL+VLVQVN  GE++K G        E+GE      +  K   NL+F G +T      +H + E
Sbjct:   10 LFNIIEAVADAVT-ASQATKRCRLVAVSKTKSADLIEACYSQNQRHFGENYVQELEEKSDVLASKCLDIRWHFIGQVQSNKIGK-ICNSPGLWCVETVETEKHARIFDKEWSKHGANLSPLRVLVQVNTSGEDNKGGI-------EIGEAPKLAEFIRKECQNLKFDGFMTIGSFDNSHASGE 183          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: Y556_SYNY3 (UPF0001 protein slr0556 OS=Synechocystis sp. (strain PCC 6803) GN=slr0556 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.338e-17
Identity = 57/147 (38.78%), Postives = 86/147 (58.50%), Query Frame = 2
Query:  143 PDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNYRGEESKSGS*AFRVVGELGERW*VKTGPNLEFCGLLTTL 577
            P  +R+VAV+KTK ++ I   Y AG R F E+ +QE + K   L +  D+ WHFIG LQSNK + +   V N   + SVDN  IA +L+R+ E + + P + L+Q+    +E+KSG     +  +L +   +K   NL+ CGL+T L
Sbjct:   15 PPSVRLVAVTKTKAIADIEAAYGAGIRDFAESRIQEALPKIEALANYQDINWHFIGRLQSNKARKV---VENFTYIHSVDNLAIAVKLDRIAEELNKFP-QGLLQIKLLPDENKSGWTREELKLDLPQLELLK---NLKICGLMTIL 154          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: Y531_BUCAP (UPF0001 protein BUsg_531 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=BUsg_531 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.804e-15
Identity = 52/162 (32.10%), Postives = 91/162 (56.17%), Query Frame = 2
Query:   89 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP--DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNYRGEESKSGS*AFRVVGELGERW*VKTGPNLEFCGLL 568
            ++ + +++    ++++ P  +I+I+AVSK + +  I+    +G   FGENYVQE ++K  +L    ++ WHFIG +QSNK K +     N    +++D EKIA  LN+  E     P+ VL+Q+N   E +K+G    +   +L +   +   PNL F G++
Sbjct:    8 IKIIKKKIQYFLKKNNYPLKKIKIIAVSKNQGIDKIKLAISSGIHEFGENYVQEGIDKIQKLKKYQNIIWHFIGKVQSNKTKII---AENFDWCQTIDREKIAILLNKYREKKS-FPMNVLMQINISNEVTKNGI-CIKNYKKLAKT--ISLMPNLNFRGIM 162          
BLAST of EY679820 vs. ExPASy Swiss-Prot
Match: Y395_HELPY (UPF0001 protein HP_0395 OS=Helicobacter pylori GN=HP_0395 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.738e-14
Identity = 63/179 (35.20%), Postives = 93/179 (51.96%), Query Frame = 2
Query:   95 SVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNYRGEESKSG---S*AFRVVGELGERW*VKTGPNLEFCGLLTTLGCQITHRTPEKLLE 619
            ++I ++ +A    SR    ++IVAVSK      I+  Y    R FGEN VQ++  K   L    LEWH IG+LQ NK+  LL+  P  A++ S+D+ K+A ++ +  E +G   L  L+QVN   EESKSG     A  +  ++ E     T  +L+  GL+    C   H   EK +E
Sbjct:   10 ALITKIEKARTAYSRH-HIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKINALLSLKP--ALLHSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALEIYSQISE-----TCKHLKLKGLM----CIGAHTDDEKEIE 175          
The following BLAST results are available for this feature:
BLAST of EY679820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
YBD6_YEAST5.580e-2150.88UPF0001 protein YBL036C OS=Saccharomyces cerevisia... [more]
Y461_VIBCH6.169e-2041.61UPF0001 protein VC_0461 OS=Vibrio cholerae GN=VC_0... [more]
YGGS_ECOLI2.344e-1943.38UPF0001 protein yggS OS=Escherichia coli (strain K... [more]
YGGS_ECOL62.344e-1943.38UPF0001 protein yggS OS=Escherichia coli O6 GN=ygg... [more]
YGGS_ECO572.344e-1943.38UPF0001 protein yggS OS=Escherichia coli O157:H7 G... [more]
Y274_AQUAE1.163e-1839.85UPF0001 protein aq_274 OS=Aquifex aeolicus GN=aq_2... [more]
PROSC_CAEEL1.163e-1838.25Proline synthetase co-transcribed bacterial homolo... [more]
Y556_SYNY38.338e-1738.78UPF0001 protein slr0556 OS=Synechocystis sp. (stra... [more]
Y531_BUCAP7.804e-1532.10UPF0001 protein BUsg_531 OS=Buchnera aphidicola su... [more]
Y395_HELPY1.738e-1435.20UPF0001 protein HP_0395 OS=Helicobacter pylori GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-004-D04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679820 ID=EY679820; Name=EY679820; organism=Citrus sinensis; type=EST; length=1020bp
CCCACGCGTCCGGAATCACATCAACGAACAAGTAGAAGTAGAAACCATGG
CTGCGTCTGCCGCCACAGATGGCGTTGCAGCGACGGCGCTTCGGTCCGTG
ATCCAACGGGTCCACCAAGCCGCCGAGAGATCCAGTCGCCCGCCGGACCG
GATTCGAATCGTCGCTGTCAGCAAAACCAAACCGGTCTCAGTAATCCGTC
AGGTTTATGAGGCCGGTCACCGATGTTTCGGTGAAAACTACGTTCAAGAA
ATAGTGGAAAAGGCGGCTCAGCTTCCAGATGATCTAGAATGGCATTTCAT
TGGGAACCTGCAGAGCAATAAAGTGAAACCTTTATTGGCTGGTGTGCCTA
ACCTGGCAATGGTAGAAAGTGTGGACAACGAGAAGATTGCAGGTCGTCTT
AATCGTATGGTTGAAACCATGGGAAGGAAGCCTTTAAAAGTCTTGGTTCA
AGTGAATTACCGTGGAGAAGAATCGAAATCTGGGAGTTGAGCCTTCAGGG
TGGTCGGGGAACTTGGTGAAAGATGGTAAGTCAAAACTGGTCCGAATCTT
GAGTTTTGTGGCCTATTGACCACTTTGGGATGCCAAATTACACATCGGAC
CCCGGAAAAACTTCTAGAACATTAACAGAATGCAGAACTGGAGGGTATGG
ACAGGTCCTTGGGAATACCCGAAGCAGCACTGGGGTTCTGGCCATGGGGA
AGGCTCGGGGGGCTTTCCAACCTGGCATATGGAATGGGGGAGGCAACCGG
GGGGAGGGAATTGGAATCCCCCAAACATTGGGGGGGCGCGGGGAGAAACT
CCCAAAATAAAACAAAACTATTTTTTTTTTCTCCCCCGGGTTCCTGGGAA
AGAGGTGGGCCGCAATGTGGTATCGCAGATGACACTGGCGTCAGGGGCGT
GCGGGACTCAGCGCGGGGAGAGGAAGACGAAAAATATTTCAACATTGAAT
AGATTTAACCTATGAGACCCCACGATGCACGTGGTATACCTATTTCGAGA
CAAGCGCGCCAGGTAGAACC
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