EY679818

Overview
NameEY679818
Unique NameEY679818
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length960
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679818 vs. ExPASy Swiss-Prot
Match: CAHC_HORVU (Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.211e-23
Identity = 64/148 (43.24%), Postives = 80/148 (54.05%), Query Frame = 1
Query:  142 SVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTRYGWSWSCCR--VCGFASQGFKHCGHWAQRLWWHQRTHG---LSHLKENTPPD--FIGDWVKNGVPATSKGVTE 564
            +VER+K GF  FK E Y+K P  +  L  GQ+PKYMVFAC+DSRVCPS  L  +PGEAF +RN+AN+VP Y + +Y    S     VC    +     G        H R  G   L  LK+       F+ DWV+ G PA  K  TE
Sbjct:  126 AVERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIG--------HSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTE 265          
BLAST of EY679818 vs. ExPASy Swiss-Prot
Match: CYNT_PSEAE (Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cynT PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.993e-16
Identity = 32/67 (47.76%), Postives = 42/67 (62.69%), Query Frame = 1
Query:  154 IKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPY 354
            I +GF+ F+R+ Y     L+  LA  Q+PK +  ACSDSRV P  +   +PGE FV+RN  NIVP Y
Sbjct:    4 IIDGFLRFQRDAYPARSQLFKSLATRQAPKALFIACSDSRVVPELLTQREPGELFVIRNAGNIVPGY 70          

HSP 2 Score: 37.3502 bits (85), Expect = 3.993e-16
Identity = 18/29 (62.07%), Postives = 21/29 (72.41%), Query Frame = 2
Query:  374 GVGAAVEYAVLRLRVSNIVVIGHSACGGI 460
            GV A+VEYAV  L V +IVV GHS CG +
Sbjct:   76 GVSASVEYAVAVLGVGDIVVCGHSDCGAM 104          
BLAST of EY679818 vs. ExPASy Swiss-Prot
Match: CAN_EMENI (Carbonic anhydrase OS=Emericella nidulans GN=AN1805 PE=1 SV=2)

HSP 1 Score: 61.6178 bits (148), Expect = 1.337e-12
Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = 1
Query:  118 PSDTKAF-----DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYD 357
            PSD KA       + ++I E    +   K   +P  +++LA GQSP+Y+   CSDSRV  + ++    GE FV RN+AN+VP  D
Sbjct:    4 PSDRKAVTRYLEQTHDKIFESNRAWVASKKGADPEFFNKLAAGQSPEYLYIGCSDSRVPANEIMGLDAGEVFVHRNIANVVPTID 88          

HSP 2 Score: 32.7278 bits (73), Expect = 1.337e-12
Identity = 13/30 (43.33%), Postives = 20/30 (66.67%), Query Frame = 2
Query:  383 AAVEYAVLRLRVSNIVVIGHSACGGIKGLM 472
            + + YAV  L+V +IVV GH  CGG++  +
Sbjct:   93 SVINYAVGHLKVKHIVVCGHYNCGGVQAAL 122          
BLAST of EY679818 vs. ExPASy Swiss-Prot
Match: CYNT_ECOLI (Carbonic anhydrase 1 OS=Escherichia coli (strain K12) GN=cynT PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.501e-12
Identity = 40/102 (39.22%), Postives = 56/102 (54.90%), Query Frame = 1
Query:  145 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTRYGWSWS------CCRVCGFASQGFKHCG 432
            ++ I +GF+ F+RE + K  AL+ +LA  QSP+ +  +CSDSR+ P  V   +PG+ FV+RN  NIVP Y     G S S        RV      G  +CG
Sbjct:    1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYGPEPGGVSASVEYAVAALRVSDIVICGHSNCG 102          
BLAST of EY679818 vs. ExPASy Swiss-Prot
Match: CYNT_ECO57 (Carbonic anhydrase 1 OS=Escherichia coli O157:H7 GN=cynT PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.501e-12
Identity = 40/102 (39.22%), Postives = 56/102 (54.90%), Query Frame = 1
Query:  145 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTRYGWSWS------CCRVCGFASQGFKHCG 432
            ++ I +GF+ F+RE + K  AL+ +LA  QSP+ +  +CSDSR+ P  V   +PG+ FV+RN  NIVP Y     G S S        RV      G  +CG
Sbjct:    1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYGPEPGGVSASVEYAVAALRVSDIVICGHSNCG 102          
The following BLAST results are available for this feature:
BLAST of EY679818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
CAHC_HORVU4.211e-2343.24Carbonic anhydrase, chloroplastic OS=Hordeum vulga... [more]
CYNT_PSEAE3.993e-1647.76Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cy... [more]
CAN_EMENI1.337e-1238.82Carbonic anhydrase OS=Emericella nidulans GN=AN180... [more]
CYNT_ECOLI1.501e-1239.22Carbonic anhydrase 1 OS=Escherichia coli (strain K... [more]
CYNT_ECO571.501e-1239.22Carbonic anhydrase 1 OS=Escherichia coli O157:H7 G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-004-D01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679818 ID=EY679818; Name=EY679818; organism=Citrus sinensis; type=EST; length=960bp
GCAAATCAGTCGTACGAGGAAGCCATTGAAGCTCTCAAGAAACTTCTCAA
GGAGAAGGAAGACTTGAAACCTGTTGCTGCTGCAAAAGTAGAGCAGATTA
CTGCGCAGCTACAGACTCCATCTGACACCAAAGCATTTGATTCCGTGGAG
AGGATCAAAGAGGGCTTCATTCACTTCAAGAGAGAAAAATACGAGAAAAA
TCCAGCTCTGTACTCTGAGCTCGCCAAAGGCCAAAGCCCGAAGTATATGG
TATTTGCCTGCTCAGACTCCAGGGTTTGCCCGTCCCATGTGTTGGATTTT
CAACCTGGGGAAGCTTTCGTGGTTCGCAATGTTGCTAACATTGTTCCACC
CTATGATCAGACTAGATATGGCTGGAGTTGGAGCTGCTGTCGAGTATGCG
GTTTTGCGTCTCAGGGTTTCAAACATTGTGGTCATTGGGCACAGCGCCTG
TGGTGGCATCAAAGGACTCATGGTCTTTCACATTTGAAGGAAAACACTCC
CCCCGATTTCATTGGAGACTGGGTGAAAAATGGCGTCCCTGCCACATCTA
AGGGGGTTACCGAGCATGGGGGACCAGCCTTTTGGAAACCAGTGCCCATC
CGGTGAAAAGGAGCGGGAGAAAGTATCCCCCAGGATCAGGCTAGCGGTAG
GAGTGGAAAGAGAAAAGAGGGGGAAACAAAAACGGGAGAGCGCGGGGAGG
GTTGAACGGAGTACGGAAAAGAGACGGACGAAAGTTGGGGGGACCAGAGA
AGAGCCGTTCCTCAAAGCAAGCTACATATAGAACAACCACACAAGAGCGA
AAAACGGCAAGAGAACACACAGAAGAGACACAGAGATGACCAGACGAAGC
ACACACTAACAAACCGAGGAAGGGCAGGAAAACGGAGCAGCAAGAGGGAA
GGCCGGAGAGAGAGCGGGGGCGGATGCGGGTTCGCACAGGAGGAGGAACG
CGCGGGAAGG
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