EY679815
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679815 vs. ExPASy Swiss-Prot
Match: RBS2_THIFE (Ribulose bisphosphate carboxylase small chain 2 OS=Thiobacillus ferrooxidans GN=cbbS2 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.489e-17 Identity = 43/101 (42.57%), Postives = 58/101 (57.43%), Query Frame = 2 Query: 239 KFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ 541 KFETLSYLP L+ + + +++ Y++ GW P +E H P G YW MWKLPM+G TD +LKE K PH+ VRI+G+DN +Q Q Sbjct: 18 KFETLSYLPALTADEIRQQVAYIVSKGWNPAVE------------HTEPENAFGNYWYMWKLPMFGETDVDTILKEAERCHKRNPHNHVRIVGYDNFKQSQ 106
BLAST of EY679815 vs. ExPASy Swiss-Prot
Match: RBS_ANASP (Ribulose bisphosphate carboxylase small chain OS=Anabaena sp. (strain PCC 7120) GN=cbbS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.944e-17 Identity = 40/113 (35.40%), Postives = 67/113 (59.29%), Query Frame = 2 Query: 236 KKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCIIFIAAQATK 574 +++ETLSYLPPL+D + K++ Y++ G+IP +EF YWT+WKLP++G + +VL EV + +YP ++R++GFDN +Q Q + FI + ++ Sbjct: 8 RRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFN------------EVSEPTELYWTLWKLPLFGAKTSREVLAEVQSCRSQYPGHYIRVVGFDNIKQCQILSFIVHKPSR 108
BLAST of EY679815 vs. ExPASy Swiss-Prot
Match: RBS_CYAPA (Ribulose bisphosphate carboxylase small chain OS=Cyanophora paradoxa GN=rbcS PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 3.316e-17 Identity = 36/107 (33.64%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 236 KKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCIIFI 556 +KFET SYLPPL+D+ + +++ Y + +G+ P +EF G + WT+WKLP++G +VL E+ ++++P++++R++ FD+ RQVQ ++F+ Sbjct: 7 RKFETFSYLPPLNDQQIARQLQYALSNGYSPAIEFSFT------------GKAEDLVWTLWKLPLFGAQSPEEVLSEIQACKQQFPNAYIRVVAFDSIRQVQTLMFL 101
BLAST of EY679815 vs. ExPASy Swiss-Prot
Match: RBS1_CHRVI (Ribulose bisphosphate carboxylase small chain 1 OS=Chromatium vinosum GN=cbbS1 PE=1 SV=4) HSP 1 Score: 84.7297 bits (208), Expect = 8.169e-16 Identity = 40/100 (40.00%), Postives = 55/100 (55.00%), Query Frame = 2 Query: 236 KKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQ 535 +KFET SYLP + + + K++ Y++ GW P +E H P YW MWKLPM+G TD +LKE K +P++ VR+IGFDN Q Sbjct: 17 RKFETFSYLPRMDADRIRKQVEYIVSKGWNPAIE------------HTEPENAFDHYWYMWKLPMFGETDIDTILKEAEACHKAHPNNHVRLIGFDNYAQ 104
BLAST of EY679815 vs. ExPASy Swiss-Prot
Match: RBS_PSEHY (Ribulose bisphosphate carboxylase small chain OS=Pseudomonas hydrogenothermophila GN=cbbS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.067e-15 Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 236 KKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ 541 K+FET SYLP +S E + K+I Y++ GW P +E H P YW MWKLPM+G TD +++ E+ ++ P+ +++IG+DN RQ Q Sbjct: 24 KRFETFSYLPQMSAEEIRKQIEYIVSKGWNPAIE------------HCEPENAILHYWYMWKLPMFGETDVDKIIAEIEACKRSNPNHLIKLIGYDNIRQTQ 113
BLAST of EY679815 vs. ExPASy Swiss-Prot
Match: RBS_ALVHS (Ribulose bisphosphate carboxylase small chain OS=Alvinoconcha hessleri symbiotic bacterium GN=cbbS PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.104e-15 Identity = 41/102 (40.20%), Postives = 53/102 (51.96%), Query Frame = 2 Query: 236 KKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ 541 +KFET SYLP L E + K++ Y++ GW P +E H P YW MWKLPM+G TD +L E K +P VR+IG+DN Q Q Sbjct: 17 RKFETFSYLPELGVEKIRKQVEYIVSKGWNPAVE------------HTEPENAFDHYWYMWKLPMFGETDVDAILAEAEACHKAHPSHHVRLIGYDNYAQSQ 106
BLAST of EY679815 vs. ExPASy Swiss-Prot
Match: RBS_THIDA (Ribulose bisphosphate carboxylase small chain OS=Thiobacillus denitrificans (strain ATCC 25259) GN=cbbS PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.295e-15 Identity = 39/102 (38.24%), Postives = 56/102 (54.90%), Query Frame = 2 Query: 236 KKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ 541 +KFET SYLP ++ + K++ YL+ GW P +E H P + YW MWKLPM+G TD ++L E K P++ VR++G+DN Q Q Sbjct: 17 RKFETFSYLPAMNAADIRKQVEYLVSKGWNPAIE------------HTEPEHLMDSYWYMWKLPMFGETDIDRILGEAEACHKANPNNHVRLVGYDNFAQSQ 106
BLAST of EY679815 vs. ExPASy Swiss-Prot
Match: RBS1_HYDMR (Ribulose bisphosphate carboxylase small chain 1 OS=Hydrogenovibrio marinus GN=cbbS-1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.541e-14 Identity = 41/102 (40.20%), Postives = 55/102 (53.92%), Query Frame = 2 Query: 236 KKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ 541 +K ET SYLP ++ + + ++ Y+I GW P +E H P YW MWKLPM+G TDA VL EV K P++ VR+IG+DN Q Q Sbjct: 17 RKAETFSYLPKMTTDQIKAQVEYIISKGWNPAIE------------HSEPENAFSYYWYMWKLPMFGDTDANVVLAEVDACIKANPNNHVRLIGYDNYAQSQ 106
BLAST of EY679815 vs. ExPASy Swiss-Prot
Match: RBS2_HYDMR (Ribulose bisphosphate carboxylase small chain 2 OS=Hydrogenovibrio marinus GN=cbbS-2 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.012e-14 Identity = 37/99 (37.37%), Postives = 53/99 (53.54%), Query Frame = 2 Query: 245 ETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ 541 ET S+LP + + + +I Y+I GW P LE H++P YW MWKLPM+G D VL E+ + + YP+ +R+IG+DN Q Q Sbjct: 15 ETFSFLPEFTADEIYDQIVYIINQGWTPALE------------HEAPEAASSHYWGMWKLPMFGTRDPNAVLAEIDQCRAAYPNHMIRLIGYDNYTQCQ 101
BLAST of EY679815 vs. ExPASy Swiss-Prot
Match: RBS2_CHRVI (Ribulose bisphosphate carboxylase small chain 2 OS=Chromatium vinosum GN=cbbS2 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.794e-13 Identity = 37/107 (34.58%), Postives = 58/107 (54.21%), Query Frame = 2 Query: 239 KFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCIIFIA 559 ++ET SYLPPL+ E +L++I Y++ +GW LE H+ P YW MWK+P +G D +L E+ ++ YP VR++G+D Q + F+A Sbjct: 15 RYETFSYLPPLNREEILEQILYILDNGWNASLE------------HEHPDRAFEYYWPMWKMPFFGEQDPNVILTEIESCRRSYPDHHVRLVGYDTYAQSKGHSFLA 109 The following BLAST results are available for this feature:
BLAST of EY679815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY679815 ID=EY679815; Name=EY679815; organism=Citrus sinensis; type=EST; length=937bpback to top |