EY679813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 8.236e-78 Identity = 153/216 (70.83%), Postives = 170/216 (78.70%), Query Frame = 2 Query: 101 GKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 GKAV +APS +EL GR+SMRKT VS SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSIL+IW L G ++G + GPLG + DPLYPGGS +G +P+ AE ++ + + GRLAMF Sbjct: 15 GKAVKVAPSSSELFGNGRVSMRKTVKAPVSD-SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEG-----YRVAGGPLG-EIVDPLYPGGSFDPLGL-AEDPERSAE-LKVKELKNGRLAMF 221
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 3.130e-77 Identity = 154/223 (69.06%), Postives = 171/223 (76.68%), Query Frame = 2 Query: 95 FVGKAVNLAPSGNELSNGGRISMRKTASKS---VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAE--PQRLGKSRMGRLAMF 736 F GKAVN+ S R++MRKTA+K+ +SGSPWYGPDRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIW L G ++G + GPLG + DPLYPGGS +G +P+AF E + L K R+ L+MF Sbjct: 13 FAGKAVNVPSSS---FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG-----YRIAGGPLG-EVVDPLYPGGSFDPLGL-ADDPEAFGELKVKELKKGRLAMLSMF 225
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 3.130e-77 Identity = 150/215 (69.77%), Postives = 169/215 (78.60%), Query Frame = 2 Query: 95 FVGKAVNLAPSGNELSNGGRISMRKTASKSVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWGLPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 F GKAV L+P+ +E+ GR++MRKT +K SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFS+GGLDYLGNPSL+HAQSILAIW L G GPLG + D LYPGGS +G +P+AFAE ++ + + GRLAMF Sbjct: 13 FAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLG-EAEDLLYPGGSFDPLGL-ATDPEAFAE-LKVKELKNGRLAMF 224
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 9.106e-77 Identity = 154/221 (69.68%), Postives = 173/221 (78.28%), Query Frame = 2 Query: 95 FVGKAVNLAPSGNELSNGGRISMRKTASKS---VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 F GKAVN+ S L R++MRKTA+K+ SSGSPWYGPDRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIW L G ++G + GPLG + DPLYPGG+ +G +P+AFA+ ++ + + GRLAMF Sbjct: 13 FAGKAVNVPSS---LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEG-----YRVAGGPLG-EVVDPLYPGGTFDPLGL-ADDPEAFAD-VKVKELKNGRLAMF 222
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 2.649e-76 Identity = 152/218 (69.72%), Postives = 171/218 (78.44%), Query Frame = 2 Query: 101 GKAVNLAPSGNELSNGGRISMRKTAS--KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 GK + L PS EL R +MRK+A+ K SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIW L G ++G + GPLG + DPLYPGGS +G +P+AFAE ++ + + GRLAMF Sbjct: 18 GKQLKLNPSSQELG-AARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEG-----YRIAGGPLG-EVVDPLYPGGSFDPLGL-ADDPEAFAE-LKVKELKNGRLAMF 226
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 3.460e-76 Identity = 152/220 (69.09%), Postives = 171/220 (77.73%), Query Frame = 2 Query: 95 FVGKAVNLAPSGNELSNGGRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 F GKAV PS + L R++MRKTA+K+ VSS SPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA WFKAG+QIFS+GGLDYLGNPSL+HAQS+LAIW L G ++G + GPLG + DPLYPGGS +G P+AFAE ++ + + GRLAMF Sbjct: 13 FAGKAVKNLPS-SALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEG-----YRIAGGPLG-EIVDPLYPGGSFDPLGL-AERPQAFAE-LKVKEIKNGRLAMF 223
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 4.519e-76 Identity = 149/202 (73.76%), Postives = 164/202 (81.19%), Query Frame = 2 Query: 149 GRISMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 GRI+MRKT K +SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIW L G ++G + GPLG + DPLYPGGS +G +P+AFAE ++ + + GRLAMF Sbjct: 26 GRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEG-----YRIAGGPLG-EVVDPLYPGGSFDPLGL-ADDPEAFAE-LKVKELKNGRLAMF 219
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 1.315e-75 Identity = 151/226 (66.81%), Postives = 172/226 (76.11%), Query Frame = 2 Query: 101 GKAVNLAPSGNELSNGG-------RISMRKTASKSVS---SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 G+ +L P N+L G R++MRK +K ++ S SPWYGPDRV YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIW L G ++G + GPLG + TDP+YPGGS +G +P+AFAE ++ + + GRLAMF Sbjct: 14 GQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG-----YRIAGGPLG-EVTDPIYPGGSFDPLGL-AEDPEAFAE-LKVKEIKNGRLAMF 231
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 1.315e-75 Identity = 153/220 (69.55%), Postives = 172/220 (78.18%), Query Frame = 2 Query: 101 GKAVNLA--PSGNELSNGGRISMRKTAS--KSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 GK V + PS EL G R +MRK+A+ K SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIW L G ++G + GPLG + DPLYPGGS +G +P+AFAE ++ + + GRLAMF Sbjct: 15 GKPVETSANPSSQELG-GARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEG-----YRIAGGPLG-EVVDPLYPGGSFDPLGL-ADDPEAFAE-LKVKELKNGRLAMF 225
BLAST of EY679813 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 3.826e-75 Identity = 150/218 (68.81%), Postives = 167/218 (76.61%), Query Frame = 2 Query: 95 FVGKAVNLAPSGNELSNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWG----LPGGLDGEPLKVTELLEGPLG*K*TDPLYPGGSL*SIGFWLMNPKAFAEPQRLGKSRMGRLAMF 736 F GKAV S +E+ R+SMRKTA+ GSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK G+QIFSEGGL YLGNPSL+HAQSILAIW L G ++G + GPLG + DPLYPGGS +G + +AFAE ++ + + GRLAMF Sbjct: 13 FAGKAVKNLSSSSEVQGDARVSMRKTAATK-KVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEG-----YRVAGGPLG-EVVDPLYPGGSFDPLGL-ADDAEAFAE-LKVKEIKNGRLAMF 221 The following BLAST results are available for this feature:
BLAST of EY679813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679813 ID=EY679813; Name=EY679813; organism=Citrus sinensis; type=EST; length=994bpback to top |