EY679777
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679777 vs. ExPASy Swiss-Prot
Match: NCED9_ARATH (9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic OS=Arabidopsis thaliana GN=NCED9 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.352e-29 Identity = 67/154 (43.51%), Postives = 92/154 (59.74%), Query Frame = 3 Query: 111 SSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMK-IGDLKGLFGLLMVNMQMLRAKLKVLDVSYGNGTANTALVYQHGKLLALSEADKPY 569 ++ P ++GNF PVP E P +L V G +P+C+ G +VR G NP PV+G+H FDGDGM+H +R +G +Y RF T+RL QE G F K IG+L G G+ + + R ++D + G G AN LVY +G LLA+SE D PY Sbjct: 176 TADPAVQIAGNFFPVP-EKPVVHNLPVTGTVPECIQGVYVRNGANPLHKPVSGHHLFDGDGMVHAVRFDNGSVSYACRFTETNRLVQERECGRPVFPKAIGELHGHLGIAKLMLFNTRGLFGLVDPTGGLGVANAGLVYFNGHLLAMSEDDLPY 328 HSP 2 Score: 23.8682 bits (50), Expect = 2.352e-29 Identity = 10/26 (38.46%), Postives = 17/26 (65.38%), Query Frame = 1 Query: 574 VKVLENGDLQTLGMLD*DKKITTFLL 651 VKV + GDL+T G D D ++ + ++ Sbjct: 330 VKVTQTGDLETSGRYDFDGQLKSTMI 355
BLAST of EY679777 vs. ExPASy Swiss-Prot
Match: CCD4_ARATH (Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 7.802e-27 Identity = 67/158 (42.41%), Postives = 87/158 (55.06%), Query Frame = 3 Query: 111 SSQPLHYLSGNFAPVPDETPPTKDLHVIGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEFFGGAKFMKIGDLKGLFGLLMVNMQMLRAKLKVLDVSY----GNGTANTALVYQHGKLLALSEADKPYA 572 S P H LS NFAPV DE PPT + G LP LNG ++R GPNP+F P YH FDGDGM+H ++I +GKAT SR+V+T + E+ G + G G+ + +VL Y G G ANT+L + +L AL E+D PYA Sbjct: 104 SVDPKHVLSDNFAPVLDELPPTDCEIIHGTLPLSLNGAYIRNGPNPQFLPRGPYHLFDGDGMLHAIKIHNGKATLCSRYVKTYKYNVEKQTGAPVMPNV--FSGFNGVTASVARGALTAARVLTGQYNPVNGIGLANTSLAFFSNRLFALGESDLPYA 259 HSP 2 Score: 24.6386 bits (52), Expect = 7.802e-27 Identity = 9/21 (42.86%), Postives = 16/21 (76.19%), Query Frame = 1 Query: 574 VKVLENGDLQTLGMLD*DKKI 636 V++ E+GD++T+G D D K+ Sbjct: 260 VRLTESGDIETIGRYDFDGKL 280 The following BLAST results are available for this feature:
BLAST of EY679777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679777 ID=EY679777; Name=EY679777; organism=Citrus sinensis; type=EST; length=1005bpback to top |