EY679761 | Citrus Genome Database

Overview


Name	EY679761
Unique Name	EY679761
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	955

Libraries


Library Name	Type
Sweet orange leaf, young greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY679761 vs. ExPASy Swiss-Prot
Match: CATA_STAA8 (Catalase OS=Staphylococcus aureus (strain NCTC 8325) GN=katA PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 6.028e-37
Identity = 71/179 (39.66%), Postives = 111/179 (62.01%), Query Frame = 2

Query:   14 GNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRF 541
            GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N +G+  +VKFH++   G++ L ++EA ++   +   + +DL+++I  G+YP+W +YIQ+M  +       +P D+TK W  D  PL  VG F
Sbjct:  122 GNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEF 297

HSP 2 Score: 27.7202 bits (60), Expect = 6.028e-37
Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  546 LNKNIDNFFAKNEQLAFCPAIVV 614
            LN+N DN+F   EQ AF P  ++
Sbjct:  299 LNRNPDNYFMDVEQAAFAPTNII 321

[Close]

BLAST of EY679761 vs. ExPASy Swiss-Prot
Match: CATA_STAA3 (Catalase OS=Staphylococcus aureus (strain USA300) GN=katA PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 6.028e-37
Identity = 71/179 (39.66%), Postives = 111/179 (62.01%), Query Frame = 2

Query:   14 GNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRF 541
            GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N +G+  +VKFH++   G++ L ++EA ++   +   + +DL+++I  G+YP+W +YIQ+M  +       +P D+TK W  D  PL  VG F
Sbjct:  122 GNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEF 297

HSP 2 Score: 27.7202 bits (60), Expect = 6.028e-37
Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  546 LNKNIDNFFAKNEQLAFCPAIVV 614
            LN+N DN+F   EQ AF P  ++
Sbjct:  299 LNRNPDNYFMDVEQAAFAPTNII 321

[Close]

BLAST of EY679761 vs. ExPASy Swiss-Prot
Match: CATA_STAXY (Catalase A OS=Staphylococcus xylosus GN=katA PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 7.855e-37
Identity = 73/179 (40.78%), Postives = 110/179 (61.45%), Query Frame = 2

Query:   14 GNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRF 541
            GN+DLVGNN PVFF RD   FP + H +K NPK+++   Q NW   DF++  PE+LH  + L  D G+P+ +R+M G G +TY + N  G+  +VKFH +   G++    +EA +V   +   + +DL+++I  GN+P+WK+YIQ+M  +       +P D+TK W +D  PL  VG F
Sbjct:  119 GNWDLVGNNTPVFFFRDPKLFPSLNHVVKRNPKTNMKDPQANW---DFWTLLPEALHQITILMTDRGIPKGFRNMHGFGSHTYSMYNDKGERFWVKFHHRTQQGIENYSAEEAEQVMAKDRDSSQRDLFNNIEQGNFPKWKMYIQVMTEEQARNHKDNPFDLTKVWYKDEYPLIEVGEF 294

HSP 2 Score: 26.5646 bits (57), Expect = 7.855e-37
Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  546 LNKNIDNFFAKNEQLAFCPAIVV 614
            LN+N +N+F   EQ AF P  +V
Sbjct:  296 LNRNPENYFQDVEQAAFAPTNIV 318

[Close]

BLAST of EY679761 vs. ExPASy Swiss-Prot
Match: CATA_STAAR (Catalase OS=Staphylococcus aureus (strain MRSA252) GN=katA PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.837e-36
Identity = 70/179 (39.11%), Postives = 110/179 (61.45%), Query Frame = 2

Query:   14 GNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRF 541
            GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N +G+  +VKFH++   G++ L ++ A ++   +   + +DL+++I  G+YP+W +YIQ+M  +       +P D+TK W  D  PL  VG F
Sbjct:  122 GNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEVAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEF 297

HSP 2 Score: 27.7202 bits (60), Expect = 3.837e-36
Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  546 LNKNIDNFFAKNEQLAFCPAIVV 614
            LN+N DN+F   EQ AF P  ++
Sbjct:  299 LNRNPDNYFMDVEQAAFAPTNII 321

[Close]

BLAST of EY679761 vs. ExPASy Swiss-Prot
Match: CATA_MICLU (Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 3.837e-36
Identity = 72/174 (41.38%), Postives = 107/174 (61.49%), Query Frame = 2

Query:   14 GNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVG 535
            GN+DLVGNN P+FF+RD MKF   + + K  P S +++     DF++++PES H  ++L    G+PR +R M G G +TY+ +N  G+ H+VK+H+    GV  L  DEA K+ G N     QDL++SIA G++P+W LYIQ +  +    + F+P D+TKT  +   P   VG
Sbjct:  126 GNYDLVGNNTPIFFLRDPMKFTHFIRSQKRLPDSGLRDATMQWDFWTNNPESAHQVTYLMGPRGLPRTWREMNGYGSHTYLWVNAQGEKHWVKYHFISQQGVHNLSNDEATKIAGENADFHRQDLFESIAKGDHPKWDLYIQAIPYEEGKTYRFNPFDLTKTISQKDYPRIKVG 299

HSP 2 Score: 26.1794 bits (56), Expect = 3.837e-36
Identity = 12/25 (48.00%), Postives = 16/25 (64.00%), Query Frame = 3

Query:  540 LVLNKNIDNFFAKNEQLAFCPAIVV 614
            L LN+N +N FA+ E  AF P+  V
Sbjct:  301 LTLNRNPENHFAQIESAAFSPSNTV 325

[Close]

BLAST of EY679761 vs. ExPASy Swiss-Prot
Match: CATA_RHIME (Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 1.105e-35
Identity = 69/174 (39.66%), Postives = 100/174 (57.47%), Query Frame = 2

Query:   14 GNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVG 535
            GN+DLVGNN PVFF+RD  KFPD +H  K +PK++++    + D++S  PESLH  + L  D G+P+   HM G G +TY   N AG+ ++VKFH+K   G K    +E   V G       + L+ +I  G +P W + +QIM     +K  ++P D+TK WP    P   +G
Sbjct:  120 GNWDLVGNNTPVFFIRDPYKFPDFIHTQKRHPKTNLRSATAMWDYWSLSPESLHQVTILMSDRGLPQTPMHMNGYGSHTYSFWNDAGERYWVKFHFKTQQGHKFFTNEEGEAVIGKTREGYQESLFYAIENGEFPRWTVQVQIMPELDVEKTPYNPFDLTKVWPHADYPPVEIG 293

HSP 2 Score: 30.4166 bits (67), Expect = 1.105e-35
Identity = 14/44 (31.82%), Postives = 28/44 (63.64%), Query Frame = 3

Query:  540 LVLNKNIDNFFAKNEQLAFCPAIVVSLASTNSNGIIASQIKSFS 671
            L LN+N +N+FA+ E  AF P+ +V     + + ++ ++I S++
Sbjct:  295 LELNRNPENYFAEIENAAFSPSNIVPGIGFSPDKVLQARIFSYA 338

[Close]

BLAST of EY679761 vs. ExPASy Swiss-Prot
Match: CATA_STAWA (Catalase OS=Staphylococcus warneri GN=katA PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.874e-35
Identity = 71/179 (39.66%), Postives = 109/179 (60.89%), Query Frame = 2

Query:   14 GNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRF 541
            GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N  G+  +VK+H++   G++ L ++EA  V   +   + +DL+++I  G+YP+WK+YIQ+M  +       +P D+TK W     PL  VG F
Sbjct:  122 GNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRSAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDKGERVWVKYHFRTQQGIENLTDEEAANVIATDRDSSQRDLFNAIENGDYPKWKMYIQVMTEEQARNHKDNPFDLTKVWYHGDYPLIEVGEF 297

HSP 2 Score: 26.1794 bits (56), Expect = 1.874e-35
Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  546 LNKNIDNFFAKNEQLAFCPAIVV 614
            LN+N +N+F   EQ AF P  +V
Sbjct:  299 LNRNPNNYFQDVEQAAFAPTNIV 321

[Close]

BLAST of EY679761 vs. ExPASy Swiss-Prot
Match: CATB_STAAA (Catalase-like protein OS=Staphylococcus aureus subsp. anaerobius GN=katB PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.877e-35
Identity = 70/179 (39.11%), Postives = 109/179 (60.89%), Query Frame = 2

Query:   14 GNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRF 541
            GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+D RHM G G +TY + N +G+  +VK H++   G++ L ++EA ++       + +DL+++I  G+YP+W +YIQ+M  +       +P D+TK W  D  PL  VG F
Sbjct:  122 GNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNW---DFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKLHFRTQQGIENLTDEEAAEIIATGRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEF 297

HSP 2 Score: 25.409 bits (54), Expect = 1.877e-35
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  546 LNKNIDNFFAKNEQLAFCPAIVV 614
            LN+N DN+F   EQ+AF    ++
Sbjct:  299 LNRNPDNYFMDVEQVAFASTNII 321

[Close]

BLAST of EY679761 vs. ExPASy Swiss-Prot
Match: CATA_STAEP (Catalase OS=Staphylococcus epidermidis GN=katA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 2.441e-35
Identity = 70/179 (39.11%), Postives = 111/179 (62.01%), Query Frame = 2

Query:   14 GNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRF 541
            GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+ +R+M G G +TY + N  G+  +VK+H++   G++   ++EA K+ G +   + +DLY++I  G+YP+WK+YIQ+M  +       +P D+TK W +   PL  VG F
Sbjct:  122 GNWDLVGNNTPVFFFRDPKLFISLNRAVKRDPRTNMRSAQNNW---DFWTGLPEALHQVTILMSDRGMPKGFRNMHGFGSHTYSMYNDKGERVWVKYHFRTQQGIENYTDEEAAKIVGMDRDSSQRDLYNAIENGDYPKWKMYIQVMTEEQAKNHPDNPFDLTKVWYKKDYPLIEVGEF 297

HSP 2 Score: 26.5646 bits (57), Expect = 2.441e-35
Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  546 LNKNIDNFFAKNEQLAFCPAIVV 614
            LN+N +N+F   EQ AF P  +V
Sbjct:  299 LNRNPENYFLDVEQAAFAPTNIV 321

[Close]

BLAST of EY679761 vs. ExPASy Swiss-Prot
Match: CATA_STAES (Catalase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=katA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.180e-35
Identity = 70/179 (39.11%), Postives = 111/179 (62.01%), Query Frame = 2

Query:   14 GNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHI---QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPEWKLYIQIMDPDHEDKFDFDPLDVTKTWPEDILPLQPVGRF 541
            GN+DLVGNN PVFF RD   F  +  A+K +P++++   Q NW   DF++  PE+LH  + L  D G+P+ +R+M G G +TY + N  G+  +VK+H++   G++   ++EA K+ G +   + +DLY++I  G+YP+WK+YIQ+M  +       +P D+TK W +   PL  VG F
Sbjct:  122 GNWDLVGNNTPVFFFRDPKLFISLNRAVKRDPRTNMRSAQNNW---DFWTGLPEALHQVTILMSDRGMPKGFRNMHGFGSHTYSMYNDKGERVWVKYHFRTQQGIENYTDEEAAKIVGMDRDSSQRDLYNAIENGDYPKWKMYIQVMTEEQAKNHPDNPFDLTKVWYKKDYPLIEVGEF 297

HSP 2 Score: 26.1794 bits (56), Expect = 3.180e-35
Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 3

Query:  546 LNKNIDNFFAKNEQLAFCPAIVV 614
            LN+N +N+F   EQ AF P  +V
Sbjct:  299 LNRNPENYFLDVEQAAFTPTNIV 321

The following BLAST results are available for this feature:

BLAST of EY679761 vs. ExPASy Swiss-Prot

BLAST of EY679761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141


Match Name	E-value	Identity	Description
CATA_STAA8	6.028e-37	39.66	Catalase OS=Staphylococcus aureus (strain NCTC 832...	[more]
CATA_STAA3	6.028e-37	39.66	Catalase OS=Staphylococcus aureus (strain USA300) ...	[more]
CATA_STAXY	7.855e-37	40.78	Catalase A OS=Staphylococcus xylosus GN=katA PE=3 ...	[more]
CATA_STAAR	3.837e-36	39.11	Catalase OS=Staphylococcus aureus (strain MRSA252)...	[more]
CATA_MICLU	3.837e-36	41.38	Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2	[more]
CATA_RHIME	1.105e-35	39.66	Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2	[more]
CATA_STAWA	1.874e-35	39.66	Catalase OS=Staphylococcus warneri GN=katA PE=3 SV...	[more]
CATB_STAAA	1.877e-35	39.11	Catalase-like protein OS=Staphylococcus aureus sub...	[more]
CATA_STAEP	2.441e-35	39.11	Catalase OS=Staphylococcus epidermidis GN=katA PE=...	[more]
CATA_STAES	3.180e-35	39.11	Catalase OS=Staphylococcus epidermidis (strain ATC...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-650-003-G02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY679761 ID=EY679761; Name=EY679761; organism=Citrus sinensis; type=EST; length=955bp
CCCACGCGTCCGGGGTAATTTTGATCTTGTGGGAAACAATTTCCCCGTCT
TTTTTGTCCGTGATGGAATGAAATTCCCTGACATGGTCCATGCGCTTAAA
CCTAACCCAAAGTCTCACATCCAAGAGAACTGGAGGATTGTTGACTTCTT
CTCCCATCATCCTGAAAGCTTGCACATGTTCTCCTTCTTGTTTGATGATG
TGGGTGTCCCACGAGATTACAGGCACATGGAAGGATCTGGTGTTAACACT
TACATGCTGATCAATAAGGCTGGGAAAGCACATTATGTGAAATTTCATTG
GAAACCCACTTGTGGGGTTAAGTGTTTATTGGAAGATGAGGCAATCAAGG
TTGGAGGAGCCAACCACAGCCATGCTACTCAAGATCTTTATGACTCAATT
GCAGCTGGAAACTATCCTGAGTGGAAACTCTACATCCAGATTATGGATCC
CGACCATGAGGACAAATTTGACTTTGACCCACTTGATGTAACCAAGACCT
GGCCTGAGGACATCTTGCCCTTGCAACCTGTGGGCCGGTTTGGTTTTGAA
CAAGAACATTGATAACTTCTTTGCAAAGAATGAACAGCTTGCTTTCTGCC
CTGCTATTGTGGTTTCCCTGGCCTCTACTAATTCAAATGGAATAATTGCC
TCCCAAATCAAATCTTTCTCCTAATGCTGAATAATCCAAAGGGCACCGTC
CTAGGGCGAACTTATCCTTCAACTCCCCGTTAAATGCCACCCAATGGGGG
TTCAGCACAAACATTCTTTAAGACGGTTTTATGGAATTTTCTGGCCTAGG
GGAATAAGGAAATTCAATTTACTTCCCCCTTCGGGGTTAGGATCCCGGTC
CCTTCATGGGTTAAAATGGGCTTCCCACCTTCCCCCCGGAAGATCTGCGG
GGGGGAAAGGGGGCGGGAAAATGGGGAATATTTTTCCAAAAGGAAAAAAA
CACTT