EY679696

Overview
NameEY679696
Unique NameEY679696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1003
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_STRPI (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=pdxS PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.229e-12
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 295
            P +LV    + G+LPVV+F            +MMQLG +            DPVKRA AIV+AVT++ +P++LA++S  LGEAMVG+N ++ ++
Sbjct:  191 PVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQISEDLGEAMVGINENEIQI 284          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_STRP7 (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain 70585) GN=pdxS PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.229e-12
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 295
            P +LV    + G+LPVV+F            +MMQLG +            DPVKRA AIV+AVT++ +P++LA++S  LGEAMVG+N ++ ++
Sbjct:  191 PVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQISEDLGEAMVGINENEIQI 284          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_STRP4 (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=pdxS PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.229e-12
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 295
            P +LV    + G+LPVV+F            +MMQLG +            DPVKRA AIV+AVT++ +P++LA++S  LGEAMVG+N ++ ++
Sbjct:  191 PVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQISEDLGEAMVGINENEIQI 284          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_STRP2 (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=pdxS PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.229e-12
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 295
            P +LV    + G+LPVV+F            +MMQLG +            DPVKRA AIV+AVT++ +P++LA++S  LGEAMVG+N ++ ++
Sbjct:  191 PVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQISEDLGEAMVGINENEIQI 284          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_FUSNN (Pyridoxal biosynthesis lyase pdxS OS=Fusobacterium nucleatum subsp. nucleatum GN=pdxS PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.096e-12
Identity = 40/94 (42.55%), Postives = 54/94 (57.45%), Query Frame = 2
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 295
            PYDLV      GRLPV +F            +M +LG D            DP KRA+AIV AV +Y++PE++A+VS  LGEAMVG+N ++ K+
Sbjct:  180 PYDLVKYVHDNGRLPVPNFSAGGVATPADAALMRRLGADGVFVGSGIFKSGDPKKRAKAIVEAVKNYNNPEIIAKVSEDLGEAMVGINENEIKI 273          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_COREF (Pyridoxal biosynthesis lyase pdxS OS=Corynebacterium efficiens GN=pdxS PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.096e-12
Identity = 43/102 (42.16%), Postives = 56/102 (54.90%), Query Frame = 2
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV-ERFASR 313
            APY+LV+   + G+LPV               MMMQLG D            +P +RA+AIV A  +Y+DP+ +A VS GLGEAMVG+N+ D  V  R A R
Sbjct:  194 APYELVVHVAREGKLPVPLLTAGGIATPADAAMMMQLGADGVFVGSGIFKSGNPEQRARAIVAATQNYNDPDTIARVSRGLGEAMVGINVDDLPVSHRLAER 295          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_METMP (Pyridoxal biosynthesis lyase pdxS OS=Methanococcus maripaludis GN=pdxS PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.575e-12
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 2
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSD 286
            P +L+ +  +L RLPVV+F            +MMQ+GCD            +P  RA+AIV A  ++  PEV+AEVS  LGEAMVG+N+ +
Sbjct:  197 PMELISEVAELKRLPVVNFAAGGIATPADAALMMQMGCDGVFVGSGIFKSGNPAVRAKAIVEATYNFDKPEVIAEVSKNLGEAMVGINIDE 287          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_HAEDU (Pyridoxal biosynthesis lyase pdxS OS=Haemophilus ducreyi GN=pdxS PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.669e-12
Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 2
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVE 298
            AP++L++Q KQLG+LPVV+F            +MM+LG D            +P K A+AIV+A THY D +++A +S  LGE M GL +S   V+
Sbjct:  192 APFELLLQIKQLGKLPVVNFAAGGVATPADAALMMELGADGVFVGSGIFKAENPEKFARAIVQATTHYQDYDLIARLSEELGEPMRGLEISKLSVQ 287          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_BACA2 (Pyridoxal biosynthesis lyase pdxS OS=Bacillus amyloliquefaciens (strain FZB42) GN=pdxS PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.097e-12
Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 2
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSD 286
            APY+L++Q K+ G+LPVV+F            +MMQLG D            +P K A+AIV A THY+D +++AE+S  LG AM G+ +S+
Sbjct:  191 APYELLLQIKRDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATTHYTDYKLIAELSKELGTAMKGIEISN 282          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_ANOFW (Pyridoxal biosynthesis lyase pdxS OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.097e-12
Identity = 37/91 (40.66%), Postives = 54/91 (59.34%), Query Frame = 2
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLS 283
            AP++++++ K+LGRLPVV+F            +MM LG D            +P K A+AIV A THY D E++A +S GLG AM G+++S
Sbjct:  191 APFEVLLEIKRLGRLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFKSENPEKYARAIVEATTHYEDYELIAHLSKGLGGAMKGIDIS 281          
The following BLAST results are available for this feature:
BLAST of EY679696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
PDXS_STRPI1.229e-1240.43Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]
PDXS_STRP71.229e-1240.43Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]
PDXS_STRP41.229e-1240.43Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]
PDXS_STRP21.229e-1240.43Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]
PDXS_FUSNN2.096e-1242.55Pyridoxal biosynthesis lyase pdxS OS=Fusobacterium... [more]
PDXS_COREF2.096e-1242.16Pyridoxal biosynthesis lyase pdxS OS=Corynebacteri... [more]
PDXS_METMP3.575e-1240.66Pyridoxal biosynthesis lyase pdxS OS=Methanococcus... [more]
PDXS_HAEDU4.669e-1240.63Pyridoxal biosynthesis lyase pdxS OS=Haemophilus d... [more]
PDXS_BACA26.097e-1241.30Pyridoxal biosynthesis lyase pdxS OS=Bacillus amyl... [more]
PDXS_ANOFW6.097e-1240.66Pyridoxal biosynthesis lyase pdxS OS=Anoxybacillus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-003-A06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679696 ID=EY679696; Name=EY679696; organism=Citrus sinensis; type=EST; length=1003bp
CCACGCGTCCGCGCCGTACGACTTGGTGATGCAGACGAAGCAGCTGGGGC
GGTTGCCGGTGGTGCACTTCGCAGCGGGAGGAGTGGCGACGCCGGCGGAT
GCAGCGATGATGATGCAACTTGGATGCGACGGAGTGTTTGTCGGGTCGGG
CGTGTTTAAGAGCGGGGACCCGGTGAAGCGGGCCCAGGCAATTGTACGGG
CGGTGACTCATTACAGTGACCCGGAGGTGTTGGCGGAGGTGAGCTGCGGG
TTGGGCGAGGCCATGGTGGGTCTTAATTTGAGTGACCACAAGGTTGAGAG
GTTCGCTAGTCGCTCCGAATAAATGAAAGAGATGAGGTCCCGAAGCCCTT
TATTAATCATTATCTGTAAGCTTTTTCCTTTTTCTTTAAATCTTATGTAG
TAAGCGGGATTCAAACTTCAAACCGCAGTAGTTGTCGTAATGTTTTCTTT
GGGTGTTAGTTCAATTTACACAACTTGTCAATTGAAAACTCTGTTCTTCT
TTACCAATATGAATATTTTACGCTCGGAATGTTTGTTGCGGAGGTTGATG
ATATGCCTGGCTTTTTTTCAATAATGAAAATATTTGCAGCAAGGGATCTT
TTTTTTTTTTTTTTTTTTAAATATTATTTAAAAGACCATGATGTATCCTC
ATGCCTATGTTGTTTTGCTTTTATGCCGTTTATTTCTTTGACTGGGAATT
TATGACTAATTTTTTCGGCCTTTCCAAACTTTTTTTGGTAAATTTTGGTC
CCCATCTGGCAAGGGAGGCCCCCAATATTTAAAATTTGGCTGGGCCGTTG
TTGGGCCTAATGGTTTAAATAATGGCAAAAGTTTAAAAAATGTTTTCTTT
CCAAGGGGGAGGGGTTTTGTTTTTAGGTTTTTTTGGTCCTTTTTTTTTTT
TTGTTCCCCCGGGTGAGCCCAATTCCTCTTTTTTCCCTTTGGGTATAAGG
GGGCGCAGCGGGGAAAATGGGGAAAAGGCCCTCCCGCGGCCCCCCTCTAA
ACT
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