EY679696

Overview
NameEY679696
Unique NameEY679696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1003
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_CLOBL (Pyridoxal biosynthesis lyase pdxS OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.223e-13
Identity = 42/101 (41.58%), Postives = 58/101 (57.43%), Query Frame = 2 
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 313
            AP++L+    + G+LPV++F            +MMQLGCD             P KRA+AIV+A T++ DP+VLA+VS  LG AM GL +S  + E FA R
Sbjct:  189 APFNLIEYVAEKGKLPVINFAAGGIATPADAALMMQLGCDGIFVGSGIFKSDSPEKRAKAIVKATTYFKDPDVLAKVSENLGGAMSGLEISKLETE-FAER 288
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_BACWK (Pyridoxal biosynthesis lyase pdxS OS=Bacillus weihenstephanensis (strain KBAB4) GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.223e-13
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = 2 
Query:    2 HASAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLS 283
            +  APY+++++ K+LGRLPVV+F            +MMQLG D            +P K A+AIV A THY D E++A +S GLG AM G+ +S
Sbjct:  189 NTGAPYEVLLEIKRLGRLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSENPEKFARAIVEATTHYEDYELIASLSKGLGNAMKGIEIS 282
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_FRATW (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.515e-13
Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 2 
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 313
            APYDLV    + G+LPV +F            +MMQLG +            DP+KRA+AIV AVT+Y+D ++LAEVS  LGE M G+N      E+F+ R
Sbjct:  188 APYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSADPLKRARAIVSAVTYYNDAKILAEVSEDLGEPMTGINCD---FEKFSQR 285
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_FRATT (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. tularensis GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.515e-13
Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 2 
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 313
            APYDLV    + G+LPV +F            +MMQLG +            DP+KRA+AIV AVT+Y+D ++LAEVS  LGE M G+N      E+F+ R
Sbjct:  188 APYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSADPLKRARAIVSAVTYYNDAKILAEVSEDLGEPMTGINCD---FEKFSQR 285
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_FRATO (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.515e-13
Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 2 
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 313
            APYDLV    + G+LPV +F            +MMQLG +            DP+KRA+AIV AVT+Y+D ++LAEVS  LGE M G+N      E+F+ R
Sbjct:  188 APYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSADPLKRARAIVSAVTYYNDAKILAEVSEDLGEPMTGINCD---FEKFSQR 285
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_FRATN (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. novicida (strain U112) GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.515e-13
Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 2 
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 313
            APYDLV    + G+LPV +F            +MMQLG +            DP+KRA+AIV AVT+Y+D ++LAEVS  LGE M G+N      E+F+ R
Sbjct:  188 APYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSADPLKRARAIVSAVTYYNDAKILAEVSEDLGEPMTGINCD---FEKFSQR 285
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_FRATH (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. holarctica (strain LVS) GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.515e-13
Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 2 
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 313
            APYDLV    + G+LPV +F            +MMQLG +            DP+KRA+AIV AVT+Y+D ++LAEVS  LGE M G+N      E+F+ R
Sbjct:  188 APYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSADPLKRARAIVSAVTYYNDAKILAEVSEDLGEPMTGINCD---FEKFSQR 285
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_FRATF (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.515e-13
Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 2 
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 313
            APYDLV    + G+LPV +F            +MMQLG +            DP+KRA+AIV AVT+Y+D ++LAEVS  LGE M G+N      E+F+ R
Sbjct:  188 APYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSADPLKRARAIVSAVTYYNDAKILAEVSEDLGEPMTGINCD---FEKFSQR 285
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_FRAT1 (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.515e-13
Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 2 
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 313
            APYDLV    + G+LPV +F            +MMQLG +            DP+KRA+AIV AVT+Y+D ++LAEVS  LGE M G+N      E+F+ R
Sbjct:  188 APYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSADPLKRARAIVSAVTYYNDAKILAEVSEDLGEPMTGINCD---FEKFSQR 285
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_CORU7 (Pyridoxal biosynthesis lyase pdxS OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.515e-13
Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 2 
Query:    8 SAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV-ERFASR 313
            +APY+LV++  + G+LPV  F            MMM LG +            +P +RA AIV+A  +Y DP+V+A+VS GLGEAMVG+N+ +  V  R A R
Sbjct:  202 AAPYELVVEVARNGKLPVTLFTAGGIATPADAAMMMHLGAEGVFVGSGIFKSGNPAQRAAAIVKATQNYQDPKVIADVSRGLGEAMVGINVDELPVSHRLAER 304
The following BLAST results are available for this feature:
BLAST of EY679696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
PDXS_CLOBL4.223e-1341.58Pyridoxal biosynthesis lyase pdxS OS=Clostridium b... [more]
PDXS_BACWK4.223e-1341.49Pyridoxal biosynthesis lyase pdxS OS=Bacillus weih... [more]
PDXS_FRATW5.515e-1342.57Pyridoxal biosynthesis lyase pdxS OS=Francisella t... [more]
PDXS_FRATT5.515e-1342.57Pyridoxal biosynthesis lyase pdxS OS=Francisella t... [more]
PDXS_FRATO5.515e-1342.57Pyridoxal biosynthesis lyase pdxS OS=Francisella t... [more]
PDXS_FRATN5.515e-1342.57Pyridoxal biosynthesis lyase pdxS OS=Francisella t... [more]
PDXS_FRATH5.515e-1342.57Pyridoxal biosynthesis lyase pdxS OS=Francisella t... [more]
PDXS_FRATF5.515e-1342.57Pyridoxal biosynthesis lyase pdxS OS=Francisella t... [more]
PDXS_FRAT15.515e-1342.57Pyridoxal biosynthesis lyase pdxS OS=Francisella t... [more]
PDXS_CORU75.515e-1340.78Pyridoxal biosynthesis lyase pdxS OS=Corynebacteri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-003-A06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679696 ID=EY679696; Name=EY679696; organism=Citrus sinensis; type=EST; length=1003bp
CCACGCGTCCGCGCCGTACGACTTGGTGATGCAGACGAAGCAGCTGGGGC
GGTTGCCGGTGGTGCACTTCGCAGCGGGAGGAGTGGCGACGCCGGCGGAT
GCAGCGATGATGATGCAACTTGGATGCGACGGAGTGTTTGTCGGGTCGGG
CGTGTTTAAGAGCGGGGACCCGGTGAAGCGGGCCCAGGCAATTGTACGGG
CGGTGACTCATTACAGTGACCCGGAGGTGTTGGCGGAGGTGAGCTGCGGG
TTGGGCGAGGCCATGGTGGGTCTTAATTTGAGTGACCACAAGGTTGAGAG
GTTCGCTAGTCGCTCCGAATAAATGAAAGAGATGAGGTCCCGAAGCCCTT
TATTAATCATTATCTGTAAGCTTTTTCCTTTTTCTTTAAATCTTATGTAG
TAAGCGGGATTCAAACTTCAAACCGCAGTAGTTGTCGTAATGTTTTCTTT
GGGTGTTAGTTCAATTTACACAACTTGTCAATTGAAAACTCTGTTCTTCT
TTACCAATATGAATATTTTACGCTCGGAATGTTTGTTGCGGAGGTTGATG
ATATGCCTGGCTTTTTTTCAATAATGAAAATATTTGCAGCAAGGGATCTT
TTTTTTTTTTTTTTTTTTAAATATTATTTAAAAGACCATGATGTATCCTC
ATGCCTATGTTGTTTTGCTTTTATGCCGTTTATTTCTTTGACTGGGAATT
TATGACTAATTTTTTCGGCCTTTCCAAACTTTTTTTGGTAAATTTTGGTC
CCCATCTGGCAAGGGAGGCCCCCAATATTTAAAATTTGGCTGGGCCGTTG
TTGGGCCTAATGGTTTAAATAATGGCAAAAGTTTAAAAAATGTTTTCTTT
CCAAGGGGGAGGGGTTTTGTTTTTAGGTTTTTTTGGTCCTTTTTTTTTTT
TTGTTCCCCCGGGTGAGCCCAATTCCTCTTTTTTCCCTTTGGGTATAAGG
GGGCGCAGCGGGGAAAATGGGGAAAAGGCCCTCCCGCGGCCCCCCTCTAA
ACT
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