EY679696

Overview
NameEY679696
Unique NameEY679696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1003
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_MYCBP (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.203e-13
Identity = 44/102 (43.14%), Postives = 56/102 (54.90%), Query Frame = 2 
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV-ERFASR 313
            APY+LV +  + G+LPV  F            MMMQLG +             P  RA AIV+A T + DP+VLA+VS GLGEAMVG+N+ +  V  R A R
Sbjct:  196 APYELVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGAPEHRAAAIVKATTFFDDPDVLAKVSRGLGEAMVGINVDEIAVGHRLAQR 297
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_MYCBO (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium bovis GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.203e-13
Identity = 44/102 (43.14%), Postives = 56/102 (54.90%), Query Frame = 2 
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV-ERFASR 313
            APY+LV +  + G+LPV  F            MMMQLG +             P  RA AIV+A T + DP+VLA+VS GLGEAMVG+N+ +  V  R A R
Sbjct:  196 APYELVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIFKSGAPEHRAAAIVKATTFFDDPDVLAKVSRGLGEAMVGINVDEIAVGHRLAQR 297
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_META3 (Pyridoxal biosynthesis lyase pdxS OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.203e-13
Identity = 40/89 (44.94%), Postives = 52/89 (58.43%), Query Frame = 2 
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNL 280
            P DLV +  +L RLPVV+F            +MMQLGCD            +P +RA+AIV A  +Y  P+V+AEVS  LGEAMVG+N+
Sbjct:  197 PMDLVYEVAELKRLPVVNFAAGGIATPADAALMMQLGCDGVFVGSGIFKSGNPEERARAIVEATYNYDKPDVIAEVSKNLGEAMVGINV 285
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_HAEIN (Pyridoxal biosynthesis lyase pdxS OS=Haemophilus influenzae GN=pdxS PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.203e-13
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2 
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 295
            P +LV    + G+LPVV+F            +MMQLG +            DP+KRA AIV+AVT+Y +P++LA++S  LGEAMVG+N ++ ++
Sbjct:  191 PVELVQYVHKHGKLPVVNFAAGGIATPADAALMMQLGAEGVFVGSGIFKSGDPIKRASAIVKAVTNYRNPQILAQISEDLGEAMVGINENEIQI 284
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_HAEIG (Pyridoxal biosynthesis lyase pdxS OS=Haemophilus influenzae (strain PittGG) GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.203e-13
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2 
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 295
            P +LV    + G+LPVV+F            +MMQLG +            DP+KRA AIV+AVT+Y +P++LA++S  LGEAMVG+N ++ ++
Sbjct:  191 PVELVQYVHKNGKLPVVNFAAGGIATPADAALMMQLGAEGVFVGSGIFKSGDPIKRASAIVKAVTNYQNPQILAKISEDLGEAMVGINENEIQI 284
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_HAEIE (Pyridoxal biosynthesis lyase pdxS OS=Haemophilus influenzae (strain PittEE) GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.203e-13
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2 
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 295
            P +LV    + G+LPVV+F            +MMQLG +            DP+KRA AIV+AVT+Y +P++LA++S  LGEAMVG+N ++ ++
Sbjct:  191 PVELVQYVHKHGKLPVVNFAAGGIATPADAALMMQLGAEGVFVGSGIFKSGDPIKRASAIVKAVTNYRNPQILAQISEDLGEAMVGINENEIQI 284
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_HAEI8 (Pyridoxal biosynthesis lyase pdxS OS=Haemophilus influenzae (strain 86-028NP) GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.203e-13
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2 
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 295
            P +LV    + G+LPVV+F            +MMQLG +            DP+KRA AIV+AVT+Y +P++LA++S  LGEAMVG+N ++ ++
Sbjct:  191 PVELVQYVHKHGKLPVVNFAAGGIATPADAALMMQLGAEGVFVGSGIFKSGDPIKRASAIVKAVTNYRNPQILAQISEDLGEAMVGINENEIQI 284
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_DEHSC (Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoides sp. (strain CBDB1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.203e-13
Identity = 38/102 (37.25%), Postives = 59/102 (57.84%), Query Frame = 2 
Query:    8 SAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 313
            +AP +LV++  + G+LPVV+F            +MMQLG D            +P   A+A+V+AVTHY D ++LAE+S GLG+AM GL++     ++  S+
Sbjct:  189 NAPLELVLELHKTGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSSNPSAMAKAVVKAVTHYKDAQILAEISKGLGDAMPGLDIKQIDPDKLISQ 290
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_DEHSB (Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoides sp. (strain BAV1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.203e-13
Identity = 38/102 (37.25%), Postives = 59/102 (57.84%), Query Frame = 2 
Query:    8 SAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 313
            +AP +LV++  + G+LPVV+F            +MMQLG D            +P   A+A+V+AVTHY D ++LAE+S GLG+AM GL++     ++  S+
Sbjct:  189 NAPLELVLELHKTGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSSNPSAMAKAVVKAVTHYKDAQILAEISKGLGDAMPGLDIKQIDPDKLISQ 290
[Close]
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_FRATM (Pyridoxal biosynthesis lyase pdxS OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=pdxS PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.407e-13
Identity = 43/101 (42.57%), Postives = 56/101 (55.45%), Query Frame = 2 
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 313
            APYDLV    + G+LPV +F            +MMQLG +            DP KRA+AIV AVT+Y+D ++LAEVS  LGE M G+N      E+F+ R
Sbjct:  188 APYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSADPFKRARAIVSAVTYYNDAKILAEVSEDLGEPMTGINCD---FEKFSQR 285
The following BLAST results are available for this feature:
BLAST of EY679696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
PDXS_MYCBP7.203e-1343.14Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium... [more]
PDXS_MYCBO7.203e-1343.14Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium... [more]
PDXS_META37.203e-1344.94Pyridoxal biosynthesis lyase pdxS OS=Methanococcus... [more]
PDXS_HAEIN7.203e-1340.43Pyridoxal biosynthesis lyase pdxS OS=Haemophilus i... [more]
PDXS_HAEIG7.203e-1340.43Pyridoxal biosynthesis lyase pdxS OS=Haemophilus i... [more]
PDXS_HAEIE7.203e-1340.43Pyridoxal biosynthesis lyase pdxS OS=Haemophilus i... [more]
PDXS_HAEI87.203e-1340.43Pyridoxal biosynthesis lyase pdxS OS=Haemophilus i... [more]
PDXS_DEHSC7.203e-1337.25Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoid... [more]
PDXS_DEHSB7.203e-1337.25Pyridoxal biosynthesis lyase pdxS OS=Dehalococcoid... [more]
PDXS_FRATM9.407e-1342.57Pyridoxal biosynthesis lyase pdxS OS=Francisella t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-003-A06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679696 ID=EY679696; Name=EY679696; organism=Citrus sinensis; type=EST; length=1003bp
CCACGCGTCCGCGCCGTACGACTTGGTGATGCAGACGAAGCAGCTGGGGC
GGTTGCCGGTGGTGCACTTCGCAGCGGGAGGAGTGGCGACGCCGGCGGAT
GCAGCGATGATGATGCAACTTGGATGCGACGGAGTGTTTGTCGGGTCGGG
CGTGTTTAAGAGCGGGGACCCGGTGAAGCGGGCCCAGGCAATTGTACGGG
CGGTGACTCATTACAGTGACCCGGAGGTGTTGGCGGAGGTGAGCTGCGGG
TTGGGCGAGGCCATGGTGGGTCTTAATTTGAGTGACCACAAGGTTGAGAG
GTTCGCTAGTCGCTCCGAATAAATGAAAGAGATGAGGTCCCGAAGCCCTT
TATTAATCATTATCTGTAAGCTTTTTCCTTTTTCTTTAAATCTTATGTAG
TAAGCGGGATTCAAACTTCAAACCGCAGTAGTTGTCGTAATGTTTTCTTT
GGGTGTTAGTTCAATTTACACAACTTGTCAATTGAAAACTCTGTTCTTCT
TTACCAATATGAATATTTTACGCTCGGAATGTTTGTTGCGGAGGTTGATG
ATATGCCTGGCTTTTTTTCAATAATGAAAATATTTGCAGCAAGGGATCTT
TTTTTTTTTTTTTTTTTTAAATATTATTTAAAAGACCATGATGTATCCTC
ATGCCTATGTTGTTTTGCTTTTATGCCGTTTATTTCTTTGACTGGGAATT
TATGACTAATTTTTTCGGCCTTTCCAAACTTTTTTTGGTAAATTTTGGTC
CCCATCTGGCAAGGGAGGCCCCCAATATTTAAAATTTGGCTGGGCCGTTG
TTGGGCCTAATGGTTTAAATAATGGCAAAAGTTTAAAAAATGTTTTCTTT
CCAAGGGGGAGGGGTTTTGTTTTTAGGTTTTTTTGGTCCTTTTTTTTTTT
TTGTTCCCCCGGGTGAGCCCAATTCCTCTTTTTTCCCTTTGGGTATAAGG
GGGCGCAGCGGGGAAAATGGGGAAAAGGCCCTCCCGCGGCCCCCCTCTAA
ACT
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