EY679696

Overview
NameEY679696
Unique NameEY679696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1003
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_CORGL (Pyridoxal biosynthesis lyase pdxS OS=Corynebacterium glutamicum GN=pdxS PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 9.407e-13
Identity = 39/92 (42.39%), Postives = 52/92 (56.52%), Query Frame = 2
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSD 286
            APYDLV +    G+LPVV F            ++ Q+G +            +P  RA AIV+A T + DP V+A+VS GLGEAMVG+N+SD
Sbjct:  214 APYDLVREVASTGKLPVVTFVAGGVATPADAALVRQMGAEGVFVGSGIFKSGNPAARAAAIVKAATLFDDPSVIADVSRGLGEAMVGINVSD 305          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_CORDI (Pyridoxal biosynthesis lyase pdxS OS=Corynebacterium diphtheriae GN=pdxS PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.407e-13
Identity = 39/92 (42.39%), Postives = 51/92 (55.43%), Query Frame = 2
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSD 286
            APYDLV +    G+LPV  F            ++MQ+G +            +P  RA AIV+A T Y DP  +AEVS GLGEAMVG+N++D
Sbjct:  194 APYDLVREVAATGKLPVTLFVAGGVATPADAALVMQMGAEGVFVGSGIFKSGNPAARAAAIVKATTMYDDPAAIAEVSRGLGEAMVGINVAD 285          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_CLOAB (Pyridoxal biosynthesis lyase pdxS OS=Clostridium acetobutylicum GN=pdxS PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.407e-13
Identity = 44/101 (43.56%), Postives = 56/101 (55.45%), Query Frame = 2
Query:   11 APYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKVERFASR 313
            APYDLV      GRLPVV+F            +M++LG +            +P KRA+AIV A  +Y DP+VL EVS  LGE M GL +SD K +R+A R
Sbjct:  190 APYDLVQYVWMNGRLPVVNFAAGGVATPADAALMIRLGAEGVFVGSGIFKSENPEKRARAIVMAAAYYDDPKVLEEVSEDLGEPMYGLEISDIK-DRYAER 289          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_BACC2 (Pyridoxal biosynthesis lyase pdxS OS=Bacillus cereus (strain G9842) GN=pdxS PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.407e-13
Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = 2
Query:    2 HASAPYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLS 283
            +  APY+++++ K+LGRLPVV+F            +MMQLG D            +P + A+AIV A THY D E++A +S GLG AM G+ +S
Sbjct:  189 NTGAPYEVLLEIKRLGRLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSENPERFARAIVEATTHYEDYELIASLSKGLGNAMKGIEIS 282          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_STRZT (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=pdxS PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.229e-12
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 295
            P +LV    + G+LPVV+F            +MMQLG +            DPVKRA AIV+AVT++ +P++LA++S  LGEAMVG+N ++ ++
Sbjct:  191 PVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQISEDLGEAMVGINENEIQI 284          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_STRZP (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain P1031) GN=pdxS PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.229e-12
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 295
            P +LV    + G+LPVV+F            +MMQLG +            DPVKRA AIV+AVT++ +P++LA++S  LGEAMVG+N ++ ++
Sbjct:  191 PVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQISEDLGEAMVGINENEIQI 284          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_STRZJ (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain JJA) GN=pdxS PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.229e-12
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 295
            P +LV    + G+LPVV+F            +MMQLG +            DPVKRA AIV+AVT++ +P++LA++S  LGEAMVG+N ++ ++
Sbjct:  191 PVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQISEDLGEAMVGINENEIQI 284          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_STRR6 (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=pdxS PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.229e-12
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 295
            P +LV    + G+LPVV+F            +MMQLG +            DPVKRA AIV+AVT++ +P++LA++S  LGEAMVG+N ++ ++
Sbjct:  191 PVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQISEDLGEAMVGINENEIQI 284          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_STRPN (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae GN=pdxS PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.229e-12
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 295
            P +LV    + G+LPVV+F            +MMQLG +            DPVKRA AIV+AVT++ +P++LA++S  LGEAMVG+N ++ ++
Sbjct:  191 PVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQISEDLGEAMVGINENEIQI 284          
BLAST of EY679696 vs. ExPASy Swiss-Prot
Match: PDXS_STRPJ (Pyridoxal biosynthesis lyase pdxS OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.229e-12
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   14 PYDLVMQTKQLGRLPVVHFXXXXXXXXXXXXMMMQLGCDXXXXXXXXXXXXDPVKRAQAIVRAVTHYSDPEVLAEVSCGLGEAMVGLNLSDHKV 295
            P +LV    + G+LPVV+F            +MMQLG +            DPVKRA AIV+AVT++ +P++LA++S  LGEAMVG+N ++ ++
Sbjct:  191 PVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGDPVKRASAIVKAVTNFRNPQILAQISEDLGEAMVGINENEIQI 284          
The following BLAST results are available for this feature:
BLAST of EY679696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
PDXS_CORGL9.407e-1342.39Pyridoxal biosynthesis lyase pdxS OS=Corynebacteri... [more]
PDXS_CORDI9.407e-1342.39Pyridoxal biosynthesis lyase pdxS OS=Corynebacteri... [more]
PDXS_CLOAB9.407e-1343.56Pyridoxal biosynthesis lyase pdxS OS=Clostridium a... [more]
PDXS_BACC29.407e-1340.43Pyridoxal biosynthesis lyase pdxS OS=Bacillus cere... [more]
PDXS_STRZT1.229e-1240.43Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]
PDXS_STRZP1.229e-1240.43Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]
PDXS_STRZJ1.229e-1240.43Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]
PDXS_STRR61.229e-1240.43Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]
PDXS_STRPN1.229e-1240.43Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]
PDXS_STRPJ1.229e-1240.43Pyridoxal biosynthesis lyase pdxS OS=Streptococcus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-003-A06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679696 ID=EY679696; Name=EY679696; organism=Citrus sinensis; type=EST; length=1003bp
CCACGCGTCCGCGCCGTACGACTTGGTGATGCAGACGAAGCAGCTGGGGC
GGTTGCCGGTGGTGCACTTCGCAGCGGGAGGAGTGGCGACGCCGGCGGAT
GCAGCGATGATGATGCAACTTGGATGCGACGGAGTGTTTGTCGGGTCGGG
CGTGTTTAAGAGCGGGGACCCGGTGAAGCGGGCCCAGGCAATTGTACGGG
CGGTGACTCATTACAGTGACCCGGAGGTGTTGGCGGAGGTGAGCTGCGGG
TTGGGCGAGGCCATGGTGGGTCTTAATTTGAGTGACCACAAGGTTGAGAG
GTTCGCTAGTCGCTCCGAATAAATGAAAGAGATGAGGTCCCGAAGCCCTT
TATTAATCATTATCTGTAAGCTTTTTCCTTTTTCTTTAAATCTTATGTAG
TAAGCGGGATTCAAACTTCAAACCGCAGTAGTTGTCGTAATGTTTTCTTT
GGGTGTTAGTTCAATTTACACAACTTGTCAATTGAAAACTCTGTTCTTCT
TTACCAATATGAATATTTTACGCTCGGAATGTTTGTTGCGGAGGTTGATG
ATATGCCTGGCTTTTTTTCAATAATGAAAATATTTGCAGCAAGGGATCTT
TTTTTTTTTTTTTTTTTTAAATATTATTTAAAAGACCATGATGTATCCTC
ATGCCTATGTTGTTTTGCTTTTATGCCGTTTATTTCTTTGACTGGGAATT
TATGACTAATTTTTTCGGCCTTTCCAAACTTTTTTTGGTAAATTTTGGTC
CCCATCTGGCAAGGGAGGCCCCCAATATTTAAAATTTGGCTGGGCCGTTG
TTGGGCCTAATGGTTTAAATAATGGCAAAAGTTTAAAAAATGTTTTCTTT
CCAAGGGGGAGGGGTTTTGTTTTTAGGTTTTTTTGGTCCTTTTTTTTTTT
TTGTTCCCCCGGGTGAGCCCAATTCCTCTTTTTTCCCTTTGGGTATAAGG
GGGCGCAGCGGGGAAAATGGGGAAAAGGCCCTCCCGCGGCCCCCCTCTAA
ACT
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