EY679667
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACL6A_MOUSE (Actin-like protein 6A OS=Mus musculus GN=Actl6a PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 2.280e-26 Identity = 63/184 (34.24%), Postives = 108/184 (58.70%), Query Frame = 3 Query: 24 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG----RPRHTGVMVGMGQKDAYVG-------DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 542 +++ LV D G+ V+AG+AG+D P+ FP+ +G R + +M G K G + + R + P+++G+V +WD + I HT+ ++ HPVL++EAP N +A REK+T++MFE ++ PA ++ AVL+ +A+GR+TG++LDSG + +P+++GY L I Sbjct: 9 DEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGVVLERDDGSTMMEIDGDKGKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYSIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGI 192
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACTL8_HUMAN (Actin-like protein 8 OS=Homo sapiens GN=ACTL8 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.081e-23 Identity = 62/173 (35.84%), Postives = 95/173 (54.91%), Query Frame = 3 Query: 39 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGR--------PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 533 ++ D+G+G +KAG AG + P+ VFP+IV P + V +G + T YPIE G + NW+ ++ +W N R E PV++TE PL A+R+KM +I+FE + P++ +A Q +SLYASG TG+V+DSG G++ P ++G LP Sbjct: 6 VIIDHGSGFLKAGTAGWNEPQMVFPNIVNYLPCKENPGPSYARRRVSLGIDICHPD----------TFSYPIERGRILNWEGVQYLWSFVLENHRR-EQEVPPVIITETPLREPADRKKMLEILFELLHVPSVLLADQLQMSLYASGLLTGVVVDSGYGLTRVQPFHQGRPLP 167
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT1_PSEMZ (Actin-1 (Fragment) OS=Pseudotsuga menziesii PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.691e-21 Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 3 Query: 222 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 356 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK Sbjct: 1 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 45
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ARP5_SCHPO (Actin-like protein arp5 OS=Schizosaccharomyces pombe GN=arp5 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.766e-21 Identity = 55/165 (33.33%), Postives = 95/165 (57.58%), Query Frame = 3 Query: 36 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL-KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEG 521 PLV DNG+ ++AG+ G+ P+ VF ++V R R + + VG++ + G ++ + P E ++SNWD ME++ +TF +L + EHP+ +TE NP R MT+++FE +N P++ I + S Y + + ++GIVL+ G+ SH +P+ G Sbjct: 26 PLVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNG 185
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ARP4_SCHPO (Actin-related protein 4 OS=Schizosaccharomyces pombe GN=arp4 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.188e-20 Identity = 61/201 (30.35%), Postives = 95/201 (47.26%), Query Frame = 3 Query: 24 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFSPQ 626 +++ +V D G+ + GF+G+D P+ V PS G + G + Y+ +S G + +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K + MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L D L + L F P+ Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNPG-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSGNAINDILAQTLRDKNFEVMPK 201
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ARP4_YARLI (Actin-related protein 4 OS=Yarrowia lipolytica GN=ARP4 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 6.013e-19 Identity = 53/176 (30.11%), Postives = 89/176 (50.57%), Query Frame = 3 Query: 24 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY-------VGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 530 +++ LV D G+ + G+AG+D P+ V + G V + + VGD A + + +P+ GIV++WD ++ IW ++ L + HP++LTE N +AN+ K +I FE+ PA Y+ AV S +A+G+ +VLD G V+ P+ +G L Sbjct: 14 DEVATLVIDTGSSYTRVGYAGEDTPKLVVSTECGLMADEDVEMEDDTSNTTKKLNKYKVGDSANLPLPNMEVLHPLTDGIVADWDAVQNIWEYSLAR-LNADTKTHPLMLTEPCWNTQANKLKALEIAFESLEVPASYLVKDAVASAFAAGKGNALVLDVGSEVASVTPVIDGLVL 188
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: CT134_MOUSE (Putative uncharacterized actin family protein C20orf134 homolog OS=Mus musculus PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.285e-18 Identity = 39/102 (38.24%), Postives = 67/102 (65.69%), Query Frame = 3 Query: 222 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 527 +PI+HG+V +WD +E +W L+V PE+ PVL++++P P REK+ +++FE PA ++A A+L+L + G +G+ +++G GV H PIY G++ Sbjct: 37 HPIKHGVVVDWDALEGLWERLMVGGLQVHPEQWPVLVSDSPSAPPKGREKVAELLFEALTVPACHMANTALLALCSIGAFSGLAVEAGAGVCHATPIYAGHS 138
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ARP4A_ARATH (Actin-related protein 4A OS=Arabidopsis thaliana GN=ARP4A PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.285e-18 Identity = 48/132 (36.36%), Postives = 75/132 (56.82%), Query Frame = 3 Query: 24 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG---------------MGQKDAYVGDEAQS-KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 371 +++ +V D G+ KAG+AG+DAP+AVFPS+VG G+ + G++ Y G +A + +R + + P + GIV++WD ++ +W H F N L + P EHP+LL E PLN + REK Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ARP7_ARATH (Actin-related protein 7 OS=Arabidopsis thaliana GN=ARP7 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.090e-18 Identity = 63/166 (37.95%), Postives = 86/166 (51.81%), Query Frame = 3 Query: 30 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 521 ++ LV D G+ +KAG A D +P + PS + R MV G A D + +TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG Sbjct: 1 MEALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDVTLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEG 156
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ARP42_SCHPO (SWI/SNF and RSC complexes subunit arp42 OS=Schizosaccharomyces pombe GN=arp42 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.134e-17 Identity = 49/175 (28.00%), Postives = 92/175 (52.57%), Query Frame = 3 Query: 24 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI--LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 542 E+I LV D G+ + G+AG+++P + PS + GV + ++ YV DE Q I + +K +GI+ +W+ W +L+V P E+ +++TE NP++ R+++ + FE + PA Y+ QAV +A+ ++T +++D G + P+ +G + I Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGI 176 The following BLAST results are available for this feature:
BLAST of EY679667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 466
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679667 ID=EY679667; Name=EY679667; organism=Citrus sinensis; type=EST; length=937bpback to top |