EY679667

Overview
NameEY679667
Unique NameEY679667
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ARP5_HUMAN (Actin-related protein 5 OS=Homo sapiens GN=ACTR5 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.586e-11
Identity = 52/175 (29.71%), Postives = 89/175 (50.86%), Query Frame = 3
Query:   36 PLVCDNGTGMVKAGFA--GDDA---PRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL-TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY----ASGRTTGIVLDSGDGVSHTVPIYEG 521
            PLV DNG+  V+AG+A  G D    PR  F ++  R R        G     VG+   S   +   L+ P +  +  N +  E +  ++F + L V+ +   +HP++LTEA  NP  +R+ M++++FE +  P +   I ++ S Y     +   +G+++ SG   +H +PI EG
Sbjct:   32 PLVLDNGSFQVRAGWACPGQDPGPEPRLQFRAVCARGRGGA----RGASGPQVGNALGSLEPLRWMLRSPFDRNVPVNLELQELLLDYSFQH-LGVSSQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYGIPKVAYGIDSLFSFYHNKPKNSMCSGLIISSGYQCTHVLPILEG 201          
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ARP7_YEAST (Actin-related protein 7 OS=Saccharomyces cerevisiae GN=ARP7 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.071e-11
Identity = 42/172 (24.42%), Postives = 80/172 (46.51%), Query Frame = 3
Query:   39 LVCDNGTGMVKAGFAGDDAPRAVFPS-IVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK---ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 542
            +V  NG+    AGF+  + P+ + PS  + R    G    +      +   A+ + G          G+  NWD +E  W + +  +L+V+PEE P+++T    N K   A  E+  ++ F+  N P   + I+ +    + G+++  V+D G    +  PI +G  + +A+
Sbjct:    8 VVIHNGSHRTVAGFSNVELPQCIIPSSYIKRTDEGGEAEFIFGTYNMIDAAAEKRNGDEVYTLVDSQGLPYNWDALEMQWRYLYDTQLKVSPEELPLVITMPATNGKPDMAILERYYELAFDKLNVPVFQIVIEPLAIALSMGKSSAFVIDIGASGCNVTPIIDGIVVKNAV 179          
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ARP10_MOUSE (Actin-related protein 10 OS=Mus musculus GN=Actr10 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.533e-11
Identity = 44/161 (27.33%), Postives = 78/161 (48.45%), Query Frame = 3
Query:   39 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 521
            +V D G    K GFAG+  PR + PS++ R                    A   + I  ++Y I    + ++  +++  H  ++  L V P +  V++ E+ L P   RE +T+++F+ F  P++ +A   +++L   G  + +VLD G   S  +PIYEG
Sbjct:   16 VVIDLGEAFTKCGFAGETGPRCIIPSVIKR--------------------AGMSKPIKVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVVIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEG 154          
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ARP5_MOUSE (Actin-related protein 5 OS=Mus musculus GN=Actr5 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.615e-11
Identity = 52/175 (29.71%), Postives = 92/175 (52.57%), Query Frame = 3
Query:   36 PLVCDNGTGMVKAGFA--GDDA---PRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL-TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY----ASGRTTGIVLDSGDGVSHTVPIYEG 521
            PLV DNG+   +AG+A  G D    PR  F ++  R R  G   G G +   VG+   S   +   L+ P +  +  N +  E +  ++F + L V+ +   +HP++LTEA  NP  +R+ M++++FE +  P +   I ++ S Y     +  ++G+++ SG   +H +P+ EG
Sbjct:   32 PLVLDNGSFQARAGWACPGPDPGPEPRLQFRAVCARGRG-GARGGPGPQ---VGNALGSLEPLRWMLRSPFDRNVPVNLELQELLLDYSFQH-LGVSSQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYRIPKVAYGIDSLFSFYHNVPKNALSSGLIISSGYQCTHILPVLEG 201          
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ARP10_HUMAN (Actin-related protein 10 OS=Homo sapiens GN=ACTR10 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.615e-11
Identity = 43/161 (26.71%), Postives = 78/161 (48.45%), Query Frame = 3
Query:   39 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 521
            +V D G    K GFAG+  PR + PS++ R                    A   + +  ++Y I    + ++  +++  H  ++  L V P +  V++ E+ L P   RE +T+++F+ F  P++ +A   +++L   G  + +VLD G   S  +PIYEG
Sbjct:   16 VVIDLGEAFTKCGFAGETGPRCIIPSVIKR--------------------AGMPKPVRVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVIIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEG 154          
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ARP4_DEBHA (Actin-related protein 4 OS=Debaryomyces hansenii GN=ARP4 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.027e-11
Identity = 38/175 (21.71%), Postives = 80/175 (45.71%), Query Frame = 3
Query:   24 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV------GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 530
            ++I  +V D+ +   + G+AGDD P+ + PS    P    + +      G  +     G+     R    +   ++  ++ +W+   + +H+ F + L +  +E P+L+TE        R+ + +  +E F+ PA+++A       +  GR   +V+D G       P+ +G +L
Sbjct:   14 DEINAIVLDSSSFHTRIGYAGDDFPKIITPSSYASPNEDAMELDNKKKNGKSKSSKIFGESINIPRSNHNVSPILKDSVIIDWEAAIEQYHYYFDDVLTLNYKEQPILITEPVWCTPQYRQTLLETFYENFDFPALFLAKSPTCISFQQGRPNCLVVDIGHDSVSVTPVIDGISL 188          
The following BLAST results are available for this feature:
BLAST of EY679667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 466
Match NameE-valueIdentityDescription
ARP5_HUMAN1.586e-1129.71Actin-related protein 5 OS=Homo sapiens GN=ACTR5 P... [more]
ARP7_YEAST2.071e-1124.42Actin-related protein 7 OS=Saccharomyces cerevisia... [more]
ARP10_MOUSE3.533e-1127.33Actin-related protein 10 OS=Mus musculus GN=Actr10... [more]
ARP5_MOUSE4.615e-1129.71Actin-related protein 5 OS=Mus musculus GN=Actr5 P... [more]
ARP10_HUMAN4.615e-1126.71Actin-related protein 10 OS=Homo sapiens GN=ACTR10... [more]
ARP4_DEBHA6.027e-1121.71Actin-related protein 4 OS=Debaryomyces hansenii G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-F12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679667 ID=EY679667; Name=EY679667; organism=Citrus sinensis; type=EST; length=937bp
GAAGTTAGAAAATGGCAGATACTGAGGATATTCAGCCTCTTGTTTGTGAC
AATGGGACTGGAATGGTGAAGGCTGGATTTGCCGGAGATGATGCTCCAAG
AGCTGTGTTCCCCAGCATTGTGGGTCGCCCTCGCCACACTGGAGTTATGG
TTGGTATGGGTCAGAAAGATGCCTATGTTGGTGATGAGGCTCAATCCAAA
AGAGGTATTTTGACTTTGAAATACCCAATCGAGCATGGCATTGTTAGCAA
CTGGGACGATATGGAGAAAATCTGGCATCACACATTTTATAATGAGCTTC
GTGTGGCTCCGGAAGAGCATCCGGTTCTTCTCACTGAGGCTCCCCTTAAT
CCAAAGGCCAATCGTGAGAAGATGACACAGATTATGTTTGAGACCTTTAA
CACCCCTGCTATGTATGTTGCTATCCAGGCTGTGCTTTCTCTCTATGCTA
GCGGTCGTACAACTGGTATTGTTCTGGACTCTGGAGATGGTGTCAGCCAC
ACAGTTCCCATCTATGAAGGTTATGCCCTTCCACACGCCATCCTCCGACT
GGACCTGGGCGGTCGTGACCTTACAGACGCCCTTATGAAAATTCTTAACC
AAGCGTGGTTTTTCTTTTCCCCACAAGTGGCTGGAACGGAAAATTGTTAG
GGACATGAAGGAGAAATTTACCCTAATTTGCTCTTGACTAAGGACAAGAG
CTAAAAAACACAAAAGACAACCTCCACCTGTGGAAAAAAACCTTTGAACT
CCCTGATGGCGCAGGTCCTCCTTATTTGGGGCCGAACGAATTCCGGGTCC
CACAAACACCCATTCCCCACACACCTGGGACGGGGGAACGGAAGCACGGC
GGGCCTCACATGGACCCAGTCAACCAACCACTATTTGAGTGCGGGAGAGA
TACACGAACAAACAAAGGCAGACCTACCCCGGGCGCC
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