EY679667

Overview
NameEY679667
Unique NameEY679667
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACTE_STRPU (Actin, cytoskeletal 3A OS=Strongylocentrotus purpuratus GN=CYIIIA PE=3 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 2.310e-95
Identity = 170/199 (85.43%), Postives = 179/199 (89.95%), Query Frame = 3 
Query:   24 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHTVPIYEGYALPHAI          TD LMKIL +  + F+
Sbjct:    4 DDVAALVVDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFT 202
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACTD_STRPU (Actin, cytoskeletal 2B OS=Strongylocentrotus purpuratus GN=CYIIB PE=2 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 2.310e-95
Identity = 170/199 (85.43%), Postives = 179/199 (89.95%), Query Frame = 3 
Query:   24 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHTVPIYEGYALPHAI          TD LMKIL +  + F+
Sbjct:    4 DDVAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACTC_STRPU (Actin, cytoskeletal 2A OS=Strongylocentrotus purpuratus GN=CYIIA PE=2 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 2.310e-95
Identity = 170/199 (85.43%), Postives = 179/199 (89.95%), Query Frame = 3 
Query:   24 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHTVPIYEGYALPHAI          TD LMKIL +  + F+
Sbjct:    4 DDVAALVVDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT3_PODCA (Actin-3 OS=Podocoryne carnea GN=ACT3 PE=3 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 2.310e-95
Identity = 172/203 (84.73%), Postives = 182/203 (89.66%), Query Frame = 3 
Query:   12 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            MAD +D+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI          TD +MKIL +  + F+
Sbjct:    1 MAD-DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYMMKILTERGYSFT 202
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT2_STRFN (Actin-15B OS=Strongylocentrotus franciscanus PE=2 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 2.310e-95
Identity = 170/199 (85.43%), Postives = 179/199 (89.95%), Query Frame = 3 
Query:   24 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHTVPIYEGYALPHAI          TD LMKIL +  + F+
Sbjct:    4 DDVAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT2_CAEEL (Actin-2 OS=Caenorhabditis elegans GN=act-2 PE=2 SV=3)

HSP 1 Score: 348.977 bits (894), Expect = 2.310e-95
Identity = 170/199 (85.43%), Postives = 179/199 (89.95%), Query Frame = 3 
Query:   24 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            +D+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI          TD LMKIL +  + F+
Sbjct:    4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT1_STRFN (Actin-15A OS=Strongylocentrotus franciscanus PE=3 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 2.310e-95
Identity = 170/199 (85.43%), Postives = 179/199 (89.95%), Query Frame = 3 
Query:   24 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHTVPIYEGYALPHAI          TD LMKIL +  + F+
Sbjct:    4 DDVAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT1_PODCA (Actin-1/2 OS=Podocoryne carnea GN=ACTIA PE=2 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 2.310e-95
Identity = 172/203 (84.73%), Postives = 182/203 (89.66%), Query Frame = 3 
Query:   12 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            MAD +D+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI          TD +MKIL +  + F+
Sbjct:    1 MAD-DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYMMKILTERGYSFT 202
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT1_HELTB (Actin CyI, cytoplasmic OS=Heliocidaris tuberculata PE=3 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 2.310e-95
Identity = 170/199 (85.43%), Postives = 179/199 (89.95%), Query Frame = 3 
Query:   24 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHTVPIYEGYALPHAI          TD LMKIL +  + F+
Sbjct:    4 DDVAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
[Close]
BLAST of EY679667 vs. ExPASy Swiss-Prot
Match: ACT1_HELER (Actin CyI, cytoplasmic OS=Heliocidaris erythrogramma PE=3 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 2.310e-95
Identity = 170/199 (85.43%), Postives = 179/199 (89.95%), Query Frame = 3 
Query:   24 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXTDALMKILNQAWFFFS 620
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHTVPIYEGYALPHAI          TD LMKIL +  + F+
Sbjct:    4 DDVAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
The following BLAST results are available for this feature:
BLAST of EY679667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 466
Match NameE-valueIdentityDescription
ACTE_STRPU2.310e-9585.43Actin, cytoskeletal 3A OS=Strongylocentrotus purpu... [more]
ACTD_STRPU2.310e-9585.43Actin, cytoskeletal 2B OS=Strongylocentrotus purpu... [more]
ACTC_STRPU2.310e-9585.43Actin, cytoskeletal 2A OS=Strongylocentrotus purpu... [more]
ACT3_PODCA2.310e-9584.73Actin-3 OS=Podocoryne carnea GN=ACT3 PE=3 SV=1[more]
ACT2_STRFN2.310e-9585.43Actin-15B OS=Strongylocentrotus franciscanus PE=2 ... [more]
ACT2_CAEEL2.310e-9585.43Actin-2 OS=Caenorhabditis elegans GN=act-2 PE=2 SV... [more]
ACT1_STRFN2.310e-9585.43Actin-15A OS=Strongylocentrotus franciscanus PE=3 ... [more]
ACT1_PODCA2.310e-9584.73Actin-1/2 OS=Podocoryne carnea GN=ACTIA PE=2 SV=1[more]
ACT1_HELTB2.310e-9585.43Actin CyI, cytoplasmic OS=Heliocidaris tuberculata... [more]
ACT1_HELER2.310e-9585.43Actin CyI, cytoplasmic OS=Heliocidaris erythrogram... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-F12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679667 ID=EY679667; Name=EY679667; organism=Citrus sinensis; type=EST; length=937bp
GAAGTTAGAAAATGGCAGATACTGAGGATATTCAGCCTCTTGTTTGTGAC
AATGGGACTGGAATGGTGAAGGCTGGATTTGCCGGAGATGATGCTCCAAG
AGCTGTGTTCCCCAGCATTGTGGGTCGCCCTCGCCACACTGGAGTTATGG
TTGGTATGGGTCAGAAAGATGCCTATGTTGGTGATGAGGCTCAATCCAAA
AGAGGTATTTTGACTTTGAAATACCCAATCGAGCATGGCATTGTTAGCAA
CTGGGACGATATGGAGAAAATCTGGCATCACACATTTTATAATGAGCTTC
GTGTGGCTCCGGAAGAGCATCCGGTTCTTCTCACTGAGGCTCCCCTTAAT
CCAAAGGCCAATCGTGAGAAGATGACACAGATTATGTTTGAGACCTTTAA
CACCCCTGCTATGTATGTTGCTATCCAGGCTGTGCTTTCTCTCTATGCTA
GCGGTCGTACAACTGGTATTGTTCTGGACTCTGGAGATGGTGTCAGCCAC
ACAGTTCCCATCTATGAAGGTTATGCCCTTCCACACGCCATCCTCCGACT
GGACCTGGGCGGTCGTGACCTTACAGACGCCCTTATGAAAATTCTTAACC
AAGCGTGGTTTTTCTTTTCCCCACAAGTGGCTGGAACGGAAAATTGTTAG
GGACATGAAGGAGAAATTTACCCTAATTTGCTCTTGACTAAGGACAAGAG
CTAAAAAACACAAAAGACAACCTCCACCTGTGGAAAAAAACCTTTGAACT
CCCTGATGGCGCAGGTCCTCCTTATTTGGGGCCGAACGAATTCCGGGTCC
CACAAACACCCATTCCCCACACACCTGGGACGGGGGAACGGAAGCACGGC
GGGCCTCACATGGACCCAGTCAACCAACCACTATTTGAGTGCGGGAGAGA
TACACGAACAAACAAAGGCAGACCTACCCCGGGCGCC
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