EY679627

Overview
NameEY679627
Unique NameEY679627
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SALSV (Probable sugar efflux transporter OS=Salmonella schwarzengrund (strain CVM19633) GN=sotB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.720e-18
Identity = 62/224 (27.68%), Postives = 104/224 (46.43%), Query Frame = -2 
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+P+G +  +   G R  F    +  +  LL  + L+P+L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G++  G   NR     + + +AL++     L P  A   +   +L   WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPIGRVVGQY-FGWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVICLLLLLP-AANSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SALPC (Probable sugar efflux transporter OS=Salmonella paratyphi C (strain RKS4594) GN=sotB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.720e-18
Identity = 62/224 (27.68%), Postives = 104/224 (46.43%), Query Frame = -2 
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+P+G +  +   G R  F    +  +  LL  + L+P+L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G++  G   NR     + + +AL++     L P  A   +   +L   WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPIGRVVGQY-FGWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLP-AADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SALPB (Probable sugar efflux transporter OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=sotB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.720e-18
Identity = 62/224 (27.68%), Postives = 104/224 (46.43%), Query Frame = -2 
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+P+G +  +   G R  F    +  +  LL  + L+P+L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G++  G   NR     + + +AL++     L P  A   +   +L   WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPIGRVVGQY-FGWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLP-AADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SALHS (Probable sugar efflux transporter OS=Salmonella heidelberg (strain SL476) GN=sotB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.720e-18
Identity = 62/224 (27.68%), Postives = 104/224 (46.43%), Query Frame = -2 
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+P+G +  +   G R  F    +  +  LL  + L+P+L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G++  G   NR     + + +AL++     L P  A   +   +L   WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPIGRVVGQY-FGWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLP-AADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SALG2 (Probable sugar efflux transporter OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=sotB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.720e-18
Identity = 62/224 (27.68%), Postives = 104/224 (46.43%), Query Frame = -2 
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+P+G +  +   G R  F    +  +  LL  + L+P+L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G++  G   NR     + + +AL++     L P  A   +   +L   WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPIGRVVGQY-FGWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLP-AADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SALEP (Probable sugar efflux transporter OS=Salmonella enteritidis PT4 (strain P125109) GN=sotB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.720e-18
Identity = 62/224 (27.68%), Postives = 104/224 (46.43%), Query Frame = -2 
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+P+G +  +   G R  F    +  +  LL  + L+P+L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G++  G   NR     + + +AL++     L P  A   +   +L   WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPIGRVVGQY-FGWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLP-AADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SALDC (Probable sugar efflux transporter OS=Salmonella dublin (strain CT_02021853) GN=sotB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.720e-18
Identity = 62/224 (27.68%), Postives = 104/224 (46.43%), Query Frame = -2 
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+P+G +  +   G R  F    +  +  LL  + L+P+L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G++  G   NR     + + +AL++     L P  A   +   +L   WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPIGRVVGQY-FGWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLP-AADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SALCH (Probable sugar efflux transporter OS=Salmonella choleraesuis GN=sotB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.720e-18
Identity = 62/224 (27.68%), Postives = 104/224 (46.43%), Query Frame = -2 
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+P+G +  +   G R  F    +  +  LL  + L+P+L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G++  G   NR     + + +AL++     L P  A   +   +L   WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPIGRVVGQY-FGWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLP-AADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SALA4 (Probable sugar efflux transporter OS=Salmonella agona (strain SL483) GN=sotB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.720e-18
Identity = 62/224 (27.68%), Postives = 104/224 (46.43%), Query Frame = -2 
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+P+G +  +   G R  F    +  +  LL  + L+P+L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +G        LLL+ G AG++G++  G   NR     + + +AL++     L P  A   +   +L   WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPIGRVVGQY-FGWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRRPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLILGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLP-AADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
[Close]
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_SALPK (Probable sugar efflux transporter OS=Salmonella paratyphi A (strain AKU_12601) GN=sotB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 7.470e-18
Identity = 63/224 (28.12%), Postives = 104/224 (46.43%), Query Frame = -2 
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTL-LLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A S+I  G   A  LG+P+G +  +   G R  F    +  +  LL  + L+P+L  E +  +  LP LF  P      +  +++  AH+ AY+Y+ PF +N +G        LLLL G AG++G++  G   NR     + + +AL++     L P  A   +   +L   WG A         + +  +AP   +  M LF  +F + I  G+  G Q+
Sbjct:  135 RAQALSLIATGTALAMVLGLPIGRVVGQY-FGWRTTFFAIGMGALITLLCLIKLLPKLPSEHSGSLKSLPLLFRCPALMSLYVLTVVVVTAHYTAYSYIEPFVQNVAGLSANFATVLLLLLGGAGIIGSLVFGKLGNRHASSLVSIAIALLVVCLLLLLP-AADSEAHLAILSIFWGIAIMVIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQV 356
The following BLAST results are available for this feature:
BLAST of EY679627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
SOTB_SALSV5.720e-1827.68Probable sugar efflux transporter OS=Salmonella sc... [more]
SOTB_SALPC5.720e-1827.68Probable sugar efflux transporter OS=Salmonella pa... [more]
SOTB_SALPB5.720e-1827.68Probable sugar efflux transporter OS=Salmonella pa... [more]
SOTB_SALHS5.720e-1827.68Probable sugar efflux transporter OS=Salmonella he... [more]
SOTB_SALG25.720e-1827.68Probable sugar efflux transporter OS=Salmonella ga... [more]
SOTB_SALEP5.720e-1827.68Probable sugar efflux transporter OS=Salmonella en... [more]
SOTB_SALDC5.720e-1827.68Probable sugar efflux transporter OS=Salmonella du... [more]
SOTB_SALCH5.720e-1827.68Probable sugar efflux transporter OS=Salmonella ch... [more]
SOTB_SALA45.720e-1827.68Probable sugar efflux transporter OS=Salmonella ag... [more]
SOTB_SALPK7.470e-1828.13Probable sugar efflux transporter OS=Salmonella pa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-C07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679627 ID=EY679627; Name=EY679627; organism=Citrus sinensis; type=EST; length=1007bp
CCTGCGGGTCCNGGTCCCGGAATTCCGGGTCGACAATCTGCCCGCCAAAG
AACGAGCCCACGGCAATGATCACCTGGAACAACGCGACGAACAGCGGCAT
GCCACGTTCCACATCCTTGGGCGCCACCACAAACATCCAGATACTCGCGC
AGGCCGGGAAGGCGCCGAAGGCGAAGCCCCACAGTGCGATCAGCATCACG
GCGCCGCTCATGCCGGTGGCGAAGTAGGGGAACAGGGCAGTGCTGGTGCC
GATCATCAGGGCCACCAGCAGCAGGGTGTGGCGCACGCTGCGGTTGGCGG
CGAAGCCGGCGAAGACGTTGCCCATTACGCCGGCCACGCCGTAGAGCAGC
AGCAGCGAGCCAATGGTCGGGCCGTCGAAGCCGGAGCTGTTTTTGAAGAA
CGGGGCGACGTAGGTGTAGGCGGCAAAGTGCGCGAGGCCGATCAGCAGCA
CGGCGATCAAGCCGACCCGGGCTTGTGGGTTGATGAACAGGGCCGGCAGG
TCGCTGATGCGGATGGCTTTTTCCGGTTCGAGGCGCGGCACCAGGAACAT
CTGCGCCAGCAGTACCGGGATGCCCACCACCGCGGTGACAAGGAAAGGCA
TGCGCCCGCCCAATCAGGGCCGCTCATCCAGGTGGCCAAGGGGTATGCCG
AGGAAGGGGGCCCAGGGTCAGCCCATCAGGATGATTGAGGGGGCTTCACA
ACGCCCACGCCATGGGAAGCAGGGGGGCGCGACTAAAGAAACCCAGGGTA
AGGTCAACTTGGAGGAAAAAACTTAAACTTTTACAGTGGCCACCAAATTA
AAGTCAGGGGCCCCATTCTTCCCAGCTGCGGCGGGGGAAAACGCAGGCAG
TCCCCAAATGTATATGCCTTGGTGCGAAAATTCCCCTGTTTCTGCCAGCG
GGGGGATGAACGAAGGGAGGGCCGCCCCCTAGCGTGCGCCTGATAGGAAC
AAAGAGTGCACCACACACAAGAAAAAAAAAAAGGAAGTAAAACGCACGAA
GAAAGAA
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