EY679627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_PSEA8 (Probable sugar efflux transporter OS=Pseudomonas aeruginosa (strain LESB58) GN=sotB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 5.354e-16 Identity = 66/233 (28.33%), Postives = 102/233 (43.78%), Query Frame = -2 Query: 35 VAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 733 VAPP + +A ++ G A LGIPLG + LG R F+ A + + LL +P L + + + LP LF P + +++ A F AY+Y+ PF K + G LLLL+G AG+ G++ + R LL L +G+S AL + + + L LWG + F + +A + M LF L+ V I G+ G + Sbjct: 129 VAPP----GQQAKALGLLATGTTLAMVLGIPLGRVVGEA-LGWRTTFMAIAGLSVLTLLYLARSLPLLPSQNSGSLRSLPMLFRRPALVCLYVLTVVVISAQFTAYSYIEPFAKQVARMSGEATTLLLLLFGGAGIFGSILFSRYSEAFPRGFLLAAILALGSSLALLLPLSAQPTWLMALSLLWGMSIMCFGLAQQSRVLRLASDATDVAMALFSGLYNVGIGAGALLGSVV 356
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: OPDE_PSEAE (Transcription regulatory protein opdE OS=Pseudomonas aeruginosa GN=opdE PE=4 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.992e-16 Identity = 61/212 (28.77%), Postives = 95/212 (44.81%), Query Frame = -2 Query: 29 LGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAI----RISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 652 LG LG L +G R FL V + L Q +P + + + AL P +G++A L + F+ +TYV PF + +G G + +LL+ G AG +G + R TL+ + L++ + + V+L+ LWG + P W+ V P+D E G LFVA+ Q+ IA+GS GG + D Sbjct: 163 LGAWLGTL-----IGWRGAFLCLVPVALVALAWQWTTLPSMRAGARAPGPGNVFTVFALLKRPGVMLGMLASSLFFMGQFSLFTYVRPFLETVTGVHGAHVSLVLLVIGAAGFIGTLLIDRVLQRRFFQTLVAIPLLMALIALVLTVLGGWPAIVVVLLGLWGLTGTSAPVGWWAWIARVFPEDAEAGGGLFVAVVQLSIALGSTLGGLLFD 369
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_ERWCH (Sugar efflux transporter B OS=Erwinia chrysanthemi GN=sotB PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.193e-15 Identity = 62/225 (27.56%), Postives = 107/225 (47.56%), Query Frame = -2 Query: 35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGL-IAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGN-VFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703 R +A +I G A LG+PLG + + LG R+ FL A ++ L+P L E + + +P LF P A VG+ + +++ AHF AY+Y+ PF + +G +LLL+G AG+ G+ +++ ++ + + + L++ T L P G +L +WG A + + +AP + M +F LF + I G+ G Q+ Sbjct: 135 RAQALGLIATGSSLAMVLGLPLGRVIGQY-LGWRVTFLTIAAGATVAMILLARLLPLLPSEHSGSLGSVPKLFRRP-ALVGIYLLTVVVVTAHFTAYSYIEPFIQTVAGLPENFTTLILLLFGCAGIAGSMLYSRYSDRFPIGFLVTAMLLLLACLTLLMPLSGYPF-GLTLLCLVWGLAMMSIGLAMQAKVLSLAPDASDVAMSIFSGLFNLGIGGGALLGSQV 356
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_PSEU2 (Probable sugar efflux transporter OS=Pseudomonas syringae pv. syringae (strain B728a) GN=sotB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.558e-15 Identity = 68/237 (28.69%), Postives = 108/237 (45.57%), Query Frame = -2 Query: 35 VAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTST----ALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 733 +APP + +A ++ G A LGIPLG + LG R FL A + V+ + +P L + + + LP LF P+ + ++ AHF AY+Y+ PF + S G LLL++G AG+MG++ ++R + LL+ A IGT T L P ++ + I +WG A F + +AP + M LF +F + I G+ G + Sbjct: 130 IAPP----GKQVQALGLLATGTSLAMVLGIPLGRVLGEA-LGWRTTFLGIAAIAALVVFLLVRALPLLPSQNSGSLRSLPILFKRPRLMAIYLLTAIVVTAHFTAYSYIEPFTQTVSLLSGEMTTILLLVFGGAGIMGSIIFSLFSDR-FPNGLLITA--IGTLTLCLLMLLPLSGDAVTLGTLTI-IWGMAIMCFGLTLQARVLSLAPDATDVAMALFSGIFNIGIGGGALLGSVV 357
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_PSE14 (Probable sugar efflux transporter OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=sotB PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 3.470e-15 Identity = 66/234 (28.21%), Postives = 106/234 (45.30%), Query Frame = -2 Query: 35 VAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAV-MLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 733 +APP + +A ++ G A LGIPLG + LG R FL A + V+ +P L + + + LP LF P+ + ++ AHF AY+Y+ PF + S G LLL++G AG+MG++ ++R + LL+ A+ T L +G + A+ L +WG A F + +AP + M LF +F + I G+ G + Sbjct: 130 IAPP----GKQVQALGLLATGTSLAMVLGIPLGRVLGEA-LGWRTTFLGIAGIAALVVFLLARALPLLPSQNSGSLRSLPILFKRPRLMAIYLLTAIVVTAHFTAYSYIEPFTQTVSRLSGEMTTILLLVFGGAGIMGSIIFSLFSDR-FPNGLLITAIGTLTVCLLMLLPLSGDATALGTLTIIWGMAIMCFGLTLQARVLSLAPDATDVAMALFSGIFNIGIGGGALLGSVV 357
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_PASMU (Probable sugar efflux transporter OS=Pasteurella multocida GN=sotB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.532e-15 Identity = 60/227 (26.43%), Postives = 110/227 (48.46%), Query Frame = -2 Query: 32 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGL-AHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGN-VFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIA-LWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIV 703 + +A ++ +G A LG+PLG L + G R F + A++ I +L L+P L + A ++ LP LF P +GL A+ +I + AHF AY+Y+ PF N S +L ++G++G+ + +F + +R L + L+ T+T L + A+ + + L+ WG I + +AP + M ++ ++ + I G+ G Q++ Sbjct: 135 KSQAIGLLAIGCSLAMILGLPLGRLIGQF-FGWRATFAIIALIAIGILCLFYQLLPHLPSKNAGSLNSLPTLFKRPLL-LGLYALTMIIISAHFTAYSYIEPFMLNISTMSHSMATFVLFVFGLSGITASLLFNRYYNAGPIRFILFSMGLL--TATLLLLFIASQQTWTMFLLTFFWGIGIAGIGLGLQIRVLHLAPDATDVAMAIYSGIYNIGIGAGALLGNQVM 357
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_PSESM (Probable sugar efflux transporter OS=Pseudomonas syringae pv. tomato GN=sotB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 7.731e-15 Identity = 68/236 (28.81%), Postives = 103/236 (43.64%), Query Frame = -2 Query: 35 VAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVM---LIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 733 +APP + +A ++ G A LGIPLG + LG R FL A V V+ +P L + + + LP LF P+ + ++ AHF AY+Y+ PF + S G LLL++G AG+MG++ ++R + LL+ A IGT A M L +WG A F + +AP + M LF +F + I G+ G + Sbjct: 134 IAPP----GKQVQALGLLATGTSLAMVLGIPLGRVLGEA-LGWRTTFLGIAGVAALVVFLLARALPLLPSQNSGSLRSLPILFKRPRLMAIYLLTAIVVTAHFTAYSYIEPFTQTVSRLSGEMTTILLLVFGGAGIMGSIVFSLFSDR-FPNGLLITA--IGTLAVCLLMLLPLSGDATMLGTLTVVWGMAIMCFGLLLQARVLSLAPDATDVAMALFSGIFNIGIGGGALLGSVV 361
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_PSEPW (Probable sugar efflux transporter OS=Pseudomonas putida (strain W619) GN=sotB PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.319e-14 Identity = 71/237 (29.96%), Postives = 104/237 (43.88%), Query Frame = -2 Query: 44 VAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLL--VALMIGTSTALFP-----YFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFG 733 VAPP + +A ++ G A LGIPLG + LG R+ FL A V + +L M +P L + + + LP LF P + + V L+ A F AY+Y+ PF + G I LLLL+G AGV G+V ++R H LL+ + L+ L P Y G+S WG A +F +A + M LF ++ + I G+ G Sbjct: 135 VAPP----GQQAKALGLLATGTTLAMVLGIPLGRVVGEA-LGWRVTFLSIAGVALATMLCLMKSLPLLPSQNSGSLRSLPILFKRPALVITYVLVTLVITAQFTAYSYIEPFALQVAQISGERITLLLLLFGGAGVFGSVLFSRYSDR-FPHGLLVGSIGLLAACLLLLLPLAGNFYLFAGLS------MFWGVAILSFSLSLQSKTLKLASDATDVAMALFSGIYNIGIGGGALLG 359
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: YTBD_BACSU (Uncharacterized MFS-type transporter ytbD OS=Bacillus subtilis GN=ytbD PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.722e-14 Identity = 79/319 (24.76%), Postives = 137/319 (42.95%), Query Frame = -2 Query: 29 SLFLSGAR*GAALPSFIPPLAETGEFSHQGIYIWGLPAFSPAAAGKNGAPDFNLVATVKV*-VFSSKLTLPWVSLVAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVP-RLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANR----SVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVA----PKDVERGMPLFVALFQVIIAVGSFFGGQIVD 955 SL+ G GA + + + T S + + +W + F A ++ +V FS + + S +A P R A SI+ G A G+P G + G R F+V VGI + LVP +L + D L N + + + L F +TY++P + +GF T+ +LL YG+A +GN+ G +NR ++ + ++ A+++ T PY A G+ + ++ + AF P +++ ++A P V+ + +A F IA+GS+ GG I D Sbjct: 52 SLYALGVTFGAPILTSL-----TSSMSRKTLLLWIMFIFIAGNTMAATASSIGILLAARVISAFSHGVFMSIGSTIAADIVPEDKRASAISIMFTGLTVATVTGVPFGTFIGQQ-FGWRFAFMVIIAVGIIAFITNGILVPSKLRKGTKTTMRDQLKLVTNSRLLLLFVITALGYGGTFVVFTYLSPLLQEVTGFKAGTVAVILLGYGIAIAIGNMIGGKLSNRNPIAALFYMFIVQAIVLFVLTFTAPYQAAGL---ITILCMGLLAFMNVPG-LQVYVVMLAERFVPSAVDVASAMNIAAFNAGIALGSYLGGVITD 360
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: YBCL_BACSU (Uncharacterized MFS-type transporter ybcL OS=Bacillus subtilis GN=ybcL PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.249e-14 Identity = 54/223 (24.22%), Postives = 108/223 (48.43%), Query Frame = -2 Query: 29 APSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANR-SVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 694 A + ++MG + +G+PLG + LG + F A++G+ ++ F +P E +K + + ALF + +GL + AYTY++P+ N SG +G + +LL++G+A ++G+ F G++ ++ V TL+ + + L G ++++ LW FA + + + P+ + + ++ Q +AVG+ GG V+ Sbjct: 130 AIATVVMGFTASLIIGVPLGRMIAVA-LGWKSVFGAIALLGLIAMVVIFFTLPYTEGDKPVPLLQQLALFKKRKVAMGLSITFFWLGGYSVAYTYLSPYLLNISGINGKLLSGVLLIFGIASLVGSKFGGYSTDKWGVPFTLVGGMTLHIVTLILLSLVTHSYIGVLVILILWSFAAWSTGPTQQFHLATIEPEMSGVLLSMNQSMMQFAMAVGAGIGGVFVE 351 The following BLAST results are available for this feature:
BLAST of EY679627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 101
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679627 ID=EY679627; Name=EY679627; organism=Citrus sinensis; type=EST; length=1007bpback to top |