EY679627

Overview
NameEY679627
Unique NameEY679627
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_PSEA8 (Probable sugar efflux transporter OS=Pseudomonas aeruginosa (strain LESB58) GN=sotB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.354e-16
Identity = 66/233 (28.33%), Postives = 102/233 (43.78%), Query Frame = -2
Query:   35 VAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 733
            VAPP      + +A  ++  G   A  LGIPLG +     LG R  F+  A + +  LL     +P L  + +  +  LP LF  P      +  +++  A F AY+Y+ PF K  +   G     LLLL+G AG+ G++     +    R  LL   L +G+S AL    +   +  + L  LWG +   F       +  +A    +  M LF  L+ V I  G+  G  +
Sbjct:  129 VAPP----GQQAKALGLLATGTTLAMVLGIPLGRVVGEA-LGWRTTFMAIAGLSVLTLLYLARSLPLLPSQNSGSLRSLPMLFRRPALVCLYVLTVVVISAQFTAYSYIEPFAKQVARMSGEATTLLLLLFGGAGIFGSILFSRYSEAFPRGFLLAAILALGSSLALLLPLSAQPTWLMALSLLWGMSIMCFGLAQQSRVLRLASDATDVAMALFSGLYNVGIGAGALLGSVV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: OPDE_PSEAE (Transcription regulatory protein opdE OS=Pseudomonas aeruginosa GN=opdE PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.992e-16
Identity = 61/212 (28.77%), Postives = 95/212 (44.81%), Query Frame = -2
Query:   29 LGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAI----RISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 652
            LG  LG L     +G R  FL    V +  L  Q   +P +           +  + AL   P   +G++A  L  +  F+ +TYV PF +  +G  G  +  +LL+ G AG +G +       R    TL+ + L++     +        +  V+L+ LWG    + P     W+  V P+D E G  LFVA+ Q+ IA+GS  GG + D
Sbjct:  163 LGAWLGTL-----IGWRGAFLCLVPVALVALAWQWTTLPSMRAGARAPGPGNVFTVFALLKRPGVMLGMLASSLFFMGQFSLFTYVRPFLETVTGVHGAHVSLVLLVIGAAGFIGTLLIDRVLQRRFFQTLVAIPLLMALIALVLTVLGGWPAIVVVLLGLWGLTGTSAPVGWWAWIARVFPEDAEAGGGLFVAVVQLSIALGSTLGGLLFD 369          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_ERWCH (Sugar efflux transporter B OS=Erwinia chrysanthemi GN=sotB PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.193e-15
Identity = 62/225 (27.56%), Postives = 107/225 (47.56%), Query Frame = -2
Query:   35 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGL-IAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGN-VFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 703
            R +A  +I  G   A  LG+PLG +  +  LG R+ FL  A      ++    L+P L  E +  +  +P LF  P A VG+ +  +++  AHF AY+Y+ PF +  +G        +LLL+G AG+ G+ +++ ++    +   +  + L++   T L P       G  +L  +WG A  +        +  +AP   +  M +F  LF + I  G+  G Q+
Sbjct:  135 RAQALGLIATGSSLAMVLGLPLGRVIGQY-LGWRVTFLTIAAGATVAMILLARLLPLLPSEHSGSLGSVPKLFRRP-ALVGIYLLTVVVVTAHFTAYSYIEPFIQTVAGLPENFTTLILLLFGCAGIAGSMLYSRYSDRFPIGFLVTAMLLLLACLTLLMPLSGYPF-GLTLLCLVWGLAMMSIGLAMQAKVLSLAPDASDVAMSIFSGLFNLGIGGGALLGSQV 356          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_PSEU2 (Probable sugar efflux transporter OS=Pseudomonas syringae pv. syringae (strain B728a) GN=sotB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.558e-15
Identity = 68/237 (28.69%), Postives = 108/237 (45.57%), Query Frame = -2
Query:   35 VAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTST----ALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 733
            +APP      + +A  ++  G   A  LGIPLG +     LG R  FL  A +   V+   +  +P L  + +  +  LP LF  P+     +   ++  AHF AY+Y+ PF +  S   G     LLL++G AG+MG++     ++R   + LL+ A  IGT T     L P     ++   + I +WG A   F       +  +AP   +  M LF  +F + I  G+  G  +
Sbjct:  130 IAPP----GKQVQALGLLATGTSLAMVLGIPLGRVLGEA-LGWRTTFLGIAAIAALVVFLLVRALPLLPSQNSGSLRSLPILFKRPRLMAIYLLTAIVVTAHFTAYSYIEPFTQTVSLLSGEMTTILLLVFGGAGIMGSIIFSLFSDR-FPNGLLITA--IGTLTLCLLMLLPLSGDAVTLGTLTI-IWGMAIMCFGLTLQARVLSLAPDATDVAMALFSGIFNIGIGGGALLGSVV 357          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_PSE14 (Probable sugar efflux transporter OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=sotB PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 3.470e-15
Identity = 66/234 (28.21%), Postives = 106/234 (45.30%), Query Frame = -2
Query:   35 VAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAV-MLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 733
            +APP      + +A  ++  G   A  LGIPLG +     LG R  FL  A +   V+      +P L  + +  +  LP LF  P+     +   ++  AHF AY+Y+ PF +  S   G     LLL++G AG+MG++     ++R   + LL+ A+   T   L     +G + A+  L  +WG A   F       +  +AP   +  M LF  +F + I  G+  G  +
Sbjct:  130 IAPP----GKQVQALGLLATGTSLAMVLGIPLGRVLGEA-LGWRTTFLGIAGIAALVVFLLARALPLLPSQNSGSLRSLPILFKRPRLMAIYLLTAIVVTAHFTAYSYIEPFTQTVSRLSGEMTTILLLVFGGAGIMGSIIFSLFSDR-FPNGLLITAIGTLTVCLLMLLPLSGDATALGTLTIIWGMAIMCFGLTLQARVLSLAPDATDVAMALFSGIFNIGIGGGALLGSVV 357          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_PASMU (Probable sugar efflux transporter OS=Pasteurella multocida GN=sotB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.532e-15
Identity = 60/227 (26.43%), Postives = 110/227 (48.46%), Query Frame = -2
Query:   32 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGL-AHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGN-VFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIA-LWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIV 703
            + +A  ++ +G   A  LG+PLG L  +   G R  F + A++ I +L     L+P L  + A  ++ LP LF  P   +GL A+ +I + AHF AY+Y+ PF  N S         +L ++G++G+  + +F  +     +R  L  + L+  T+T L  + A+  +  + L+   WG           I +  +AP   +  M ++  ++ + I  G+  G Q++
Sbjct:  135 KSQAIGLLAIGCSLAMILGLPLGRLIGQF-FGWRATFAIIALIAIGILCLFYQLLPHLPSKNAGSLNSLPTLFKRPLL-LGLYALTMIIISAHFTAYSYIEPFMLNISTMSHSMATFVLFVFGLSGITASLLFNRYYNAGPIRFILFSMGLL--TATLLLLFIASQQTWTMFLLTFFWGIGIAGIGLGLQIRVLHLAPDATDVAMAIYSGIYNIGIGAGALLGNQVM 357          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_PSESM (Probable sugar efflux transporter OS=Pseudomonas syringae pv. tomato GN=sotB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.731e-15
Identity = 68/236 (28.81%), Postives = 103/236 (43.64%), Query Frame = -2
Query:   35 VAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVM---LIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQI 733
            +APP      + +A  ++  G   A  LGIPLG +     LG R  FL  A V   V+      +P L  + +  +  LP LF  P+     +   ++  AHF AY+Y+ PF +  S   G     LLL++G AG+MG++     ++R   + LL+ A  IGT              A M   L  +WG A   F       +  +AP   +  M LF  +F + I  G+  G  +
Sbjct:  134 IAPP----GKQVQALGLLATGTSLAMVLGIPLGRVLGEA-LGWRTTFLGIAGVAALVVFLLARALPLLPSQNSGSLRSLPILFKRPRLMAIYLLTAIVVTAHFTAYSYIEPFTQTVSRLSGEMTTILLLVFGGAGIMGSIVFSLFSDR-FPNGLLITA--IGTLAVCLLMLLPLSGDATMLGTLTVVWGMAIMCFGLLLQARVLSLAPDATDVAMALFSGIFNIGIGGGALLGSVV 361          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_PSEPW (Probable sugar efflux transporter OS=Pseudomonas putida (strain W619) GN=sotB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.319e-14
Identity = 71/237 (29.96%), Postives = 104/237 (43.88%), Query Frame = -2
Query:   44 VAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLL--VALMIGTSTALFP-----YFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFG 733
            VAPP      + +A  ++  G   A  LGIPLG +     LG R+ FL  A V +  +L  M  +P L  + +  +  LP LF  P   +  + V L+  A F AY+Y+ PF    +   G  I  LLLL+G AGV G+V     ++R   H LL+  + L+      L P     Y   G+S        WG A  +F          +A    +  M LF  ++ + I  G+  G
Sbjct:  135 VAPP----GQQAKALGLLATGTTLAMVLGIPLGRVVGEA-LGWRVTFLSIAGVALATMLCLMKSLPLLPSQNSGSLRSLPILFKRPALVITYVLVTLVITAQFTAYSYIEPFALQVAQISGERITLLLLLFGGAGVFGSVLFSRYSDR-FPHGLLVGSIGLLAACLLLLLPLAGNFYLFAGLS------MFWGVAILSFSLSLQSKTLKLASDATDVAMALFSGIYNIGIGGGALLG 359          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: YTBD_BACSU (Uncharacterized MFS-type transporter ytbD OS=Bacillus subtilis GN=ytbD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.722e-14
Identity = 79/319 (24.76%), Postives = 137/319 (42.95%), Query Frame = -2
Query:   29 SLFLSGAR*GAALPSFIPPLAETGEFSHQGIYIWGLPAFSPAAAGKNGAPDFNLVATVKV*-VFSSKLTLPWVSLVAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVP-RLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANR----SVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVA----PKDVERGMPLFVALFQVIIAVGSFFGGQIVD 955
            SL+  G   GA + + +     T   S + + +W +  F         A    ++   +V   FS  + +   S +A    P   R  A SI+  G   A   G+P G    +   G R  F+V   VGI   +    LVP +L       + D   L  N +  +  +   L     F  +TY++P  +  +GF   T+  +LL YG+A  +GN+  G  +NR    ++ +  ++ A+++   T   PY A G+   + ++ +   AF   P    +++ ++A    P  V+    + +A F   IA+GS+ GG I D
Sbjct:   52 SLYALGVTFGAPILTSL-----TSSMSRKTLLLWIMFIFIAGNTMAATASSIGILLAARVISAFSHGVFMSIGSTIAADIVPEDKRASAISIMFTGLTVATVTGVPFGTFIGQQ-FGWRFAFMVIIAVGIIAFITNGILVPSKLRKGTKTTMRDQLKLVTNSRLLLLFVITALGYGGTFVVFTYLSPLLQEVTGFKAGTVAVILLGYGIAIAIGNMIGGKLSNRNPIAALFYMFIVQAIVLFVLTFTAPYQAAGL---ITILCMGLLAFMNVPG-LQVYVVMLAERFVPSAVDVASAMNIAAFNAGIALGSYLGGVITD 360          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: YBCL_BACSU (Uncharacterized MFS-type transporter ybcL OS=Bacillus subtilis GN=ybcL PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.249e-14
Identity = 54/223 (24.22%), Postives = 108/223 (48.43%), Query Frame = -2
Query:   29 APSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANR-SVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 694
            A + ++MG   +  +G+PLG +     LG +  F   A++G+  ++   F +P  E +K + +    ALF   +  +GL         +  AYTY++P+  N SG +G  +  +LL++G+A ++G+ F G++ ++  V  TL+    +   +  L         G ++++ LW FA  +        +  + P+     + +  ++ Q  +AVG+  GG  V+
Sbjct:  130 AIATVVMGFTASLIIGVPLGRMIAVA-LGWKSVFGAIALLGLIAMVVIFFTLPYTEGDKPVPLLQQLALFKKRKVAMGLSITFFWLGGYSVAYTYLSPYLLNISGINGKLLSGVLLIFGIASLVGSKFGGYSTDKWGVPFTLVGGMTLHIVTLILLSLVTHSYIGVLVILILWSFAAWSTGPTQQFHLATIEPEMSGVLLSMNQSMMQFAMAVGAGIGGVFVE 351          
The following BLAST results are available for this feature:
BLAST of EY679627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
SOTB_PSEA85.354e-1628.33Probable sugar efflux transporter OS=Pseudomonas a... [more]
OPDE_PSEAE6.992e-1628.77Transcription regulatory protein opdE OS=Pseudomon... [more]
SOTB_ERWCH1.193e-1527.56Sugar efflux transporter B OS=Erwinia chrysanthemi... [more]
SOTB_PSEU21.558e-1528.69Probable sugar efflux transporter OS=Pseudomonas s... [more]
SOTB_PSE143.470e-1528.21Probable sugar efflux transporter OS=Pseudomonas s... [more]
SOTB_PASMU4.532e-1526.43Probable sugar efflux transporter OS=Pasteurella m... [more]
SOTB_PSESM7.731e-1528.81Probable sugar efflux transporter OS=Pseudomonas s... [more]
SOTB_PSEPW1.319e-1429.96Probable sugar efflux transporter OS=Pseudomonas p... [more]
YTBD_BACSU1.722e-1424.76Uncharacterized MFS-type transporter ytbD OS=Bacil... [more]
YBCL_BACSU2.249e-1424.22Uncharacterized MFS-type transporter ybcL OS=Bacil... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-C07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679627 ID=EY679627; Name=EY679627; organism=Citrus sinensis; type=EST; length=1007bp
CCTGCGGGTCCNGGTCCCGGAATTCCGGGTCGACAATCTGCCCGCCAAAG
AACGAGCCCACGGCAATGATCACCTGGAACAACGCGACGAACAGCGGCAT
GCCACGTTCCACATCCTTGGGCGCCACCACAAACATCCAGATACTCGCGC
AGGCCGGGAAGGCGCCGAAGGCGAAGCCCCACAGTGCGATCAGCATCACG
GCGCCGCTCATGCCGGTGGCGAAGTAGGGGAACAGGGCAGTGCTGGTGCC
GATCATCAGGGCCACCAGCAGCAGGGTGTGGCGCACGCTGCGGTTGGCGG
CGAAGCCGGCGAAGACGTTGCCCATTACGCCGGCCACGCCGTAGAGCAGC
AGCAGCGAGCCAATGGTCGGGCCGTCGAAGCCGGAGCTGTTTTTGAAGAA
CGGGGCGACGTAGGTGTAGGCGGCAAAGTGCGCGAGGCCGATCAGCAGCA
CGGCGATCAAGCCGACCCGGGCTTGTGGGTTGATGAACAGGGCCGGCAGG
TCGCTGATGCGGATGGCTTTTTCCGGTTCGAGGCGCGGCACCAGGAACAT
CTGCGCCAGCAGTACCGGGATGCCCACCACCGCGGTGACAAGGAAAGGCA
TGCGCCCGCCCAATCAGGGCCGCTCATCCAGGTGGCCAAGGGGTATGCCG
AGGAAGGGGGCCCAGGGTCAGCCCATCAGGATGATTGAGGGGGCTTCACA
ACGCCCACGCCATGGGAAGCAGGGGGGCGCGACTAAAGAAACCCAGGGTA
AGGTCAACTTGGAGGAAAAAACTTAAACTTTTACAGTGGCCACCAAATTA
AAGTCAGGGGCCCCATTCTTCCCAGCTGCGGCGGGGGAAAACGCAGGCAG
TCCCCAAATGTATATGCCTTGGTGCGAAAATTCCCCTGTTTCTGCCAGCG
GGGGGATGAACGAAGGGAGGGCCGCCCCCTAGCGTGCGCCTGATAGGAAC
AAAGAGTGCACCACACACAAGAAAAAAAAAAAGGAAGTAAAACGCACGAA
GAAAGAA
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