EY679627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: NEPI_SHISS (Purine ribonucleoside efflux pump nepI OS=Shigella sonnei (strain Ss046) GN=nepI PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 6.544e-14 Identity = 54/208 (25.96%), Postives = 91/208 (43.75%), Query Frame = -2 Query: 29 LGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 652 LG LG L +G R F AV+G+ + + +P L E + + + L P G+IA+ + FA +TY+ P + N +GF + +LL +G+A +G + F RSV+ L L++ S + + + A + +WG F P S W+ E+ + VA+ Q+ G+ GG +D Sbjct: 163 LGSFLGEL-----IGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFSVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALD 365
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: YDHP_ECO57 (Inner membrane transport protein ydhP OS=Escherichia coli O157:H7 GN=ydhP PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 8.547e-14 Identity = 63/237 (26.58%), Postives = 108/237 (45.57%), Query Frame = -2 Query: 32 SLVAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGH-LDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIV 739 S+VA P + A + + MG A G+P L E +G RM FL TA +G+ +++ F +P+ + A+ + PQ L+ +L A F YTY++P ++ + + ++L+L GV +GN G A+RSV TL L++ P+ A GA + +A+WG A A + + VA + + + F + A+G+ GG ++ Sbjct: 115 SVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGET--IGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNKFGAAISMAVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVI 349
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_PSEE4 (Probable sugar efflux transporter OS=Pseudomonas entomophila (strain L48) GN=sotB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 8.547e-14 Identity = 66/235 (28.09%), Postives = 105/235 (44.68%), Query Frame = -2 Query: 44 VAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGN-VFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIA----LWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFG 733 VAPP + +A ++ G A +GIPLG + LG R+ FL A V + +L M +P L + + + LP LF P + + V L+ A F AY+Y+ PF + + G LLLL+G AGV G+ +F+ ++ ++ +A + L P +SG L A +WG A +F +A + M LF ++ + I G+ G Sbjct: 135 VAPP----GQQAKALGLLATGTTLAMVMGIPLGRVVGEA-LGWRITFLCIAGVALATMLCLMKSLPLLPSQNSGSLRSLPILFKRPALVITYLLVTLVITAQFTAYSYIEPFALHVAQIGGERTTLLLLLFGGAGVFGSLLFSRYSERFPHGFLVMAIAALAACLLLLLP-----LSGNFYLFAGLSMVWGMAILSFGLALQSKTLKLASDATDVAMALFSGIYNIGIGGGALLG 359
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: NEPI_SHIFL (Purine ribonucleoside efflux pump nepI OS=Shigella flexneri GN=nepI PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 8.547e-14 Identity = 54/208 (25.96%), Postives = 91/208 (43.75%), Query Frame = -2 Query: 29 LGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 652 LG LG L +G R F AV+G+ + + +P L E + + + L P G+IA+ + FA +TY+ P + N +GF + +LL +G+A +G + F RSV+ L L++ S + + + A + +WG F P S W+ E+ + VA+ Q+ G+ GG +D Sbjct: 163 LGSFLGEL-----IGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALD 365
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: NEPI_SHIF8 (Purine ribonucleoside efflux pump nepI OS=Shigella flexneri serotype 5b (strain 8401) GN=nepI PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 8.547e-14 Identity = 54/208 (25.96%), Postives = 91/208 (43.75%), Query Frame = -2 Query: 29 LGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 652 LG LG L +G R F AV+G+ + + +P L E + + + L P G+IA+ + FA +TY+ P + N +GF + +LL +G+A +G + F RSV+ L L++ S + + + A + +WG F P S W+ E+ + VA+ Q+ G+ GG +D Sbjct: 163 LGSFLGEL-----IGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALD 365
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: NEPI_SHIBS (Purine ribonucleoside efflux pump nepI OS=Shigella boydii serotype 4 (strain Sb227) GN=nepI PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 8.547e-14 Identity = 54/208 (25.96%), Postives = 91/208 (43.75%), Query Frame = -2 Query: 29 LGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 652 LG LG L +G R F AV+G+ + + +P L E + + + L P G+IA+ + FA +TY+ P + N +GF + +LL +G+A +G + F RSV+ L L++ S + + + A + +WG F P S W+ E+ + VA+ Q+ G+ GG +D Sbjct: 163 LGSFLGEL-----IGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALD 365
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: NEPI_ECOLI (Purine ribonucleoside efflux pump nepI OS=Escherichia coli (strain K12) GN=nepI PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 8.547e-14 Identity = 54/208 (25.96%), Postives = 91/208 (43.75%), Query Frame = -2 Query: 29 LGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 652 LG LG L +G R F AV+G+ + + +P L E + + + L P G+IA+ + FA +TY+ P + N +GF + +LL +G+A +G + F RSV+ L L++ S + + + A + +WG F P S W+ E+ + VA+ Q+ G+ GG +D Sbjct: 163 LGSFLGEL-----IGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALD 365
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: NEPI_ECOBW (Purine ribonucleoside efflux pump nepI OS=Escherichia coli (strain K12 / BW2952) GN=nepI PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 8.547e-14 Identity = 54/208 (25.96%), Postives = 91/208 (43.75%), Query Frame = -2 Query: 29 LGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 652 LG LG L +G R F AV+G+ + + +P L E + + + L P G+IA+ + FA +TY+ P + N +GF + +LL +G+A +G + F RSV+ L L++ S + + + A + +WG F P S W+ E+ + VA+ Q+ G+ GG +D Sbjct: 163 LGSFLGEL-----IGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALD 365
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_ERWCT (Probable sugar efflux transporter OS=Erwinia carotovora subsp. atroseptica GN=sotB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.116e-13 Identity = 55/225 (24.44%), Postives = 106/225 (47.11%), Query Frame = -2 Query: 32 RCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGN-VFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIV 703 + +A S++ G A LG+PLG + + LG R+ F++ ++ +++ M L+P L + + LP L P ++I AHF AY+Y+ PF + LLL++G AG++G+ +F+ +++ ++ A + L P +G S + + I +WG A A + + +A + M L+ ++ + I G+ G Q++ Sbjct: 133 KAQALSLLATGTALALVLGLPLGRVVGQY-LGWRVTFVLIGLIAAVIMVGLMKLLPVLPSSNSGSLKSLPLLLKRPALLCVYGLTVMIVTAHFTAYSYIEPFILKVALLSENFTTILLLIFGGAGIIGSMLFSRYSSKYPAGFLIVSFAFLAVCLLLLLPLSFSGWSLSTLCI-VWGIAIMALSLGMQVKVLTLASDATDVAMALYSGIYNIGIGGGALLGNQVI 355
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: YDHP_ECOLI (Inner membrane transport protein ydhP OS=Escherichia coli (strain K12) GN=ydhP PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.248e-13 Identity = 62/237 (26.16%), Postives = 107/237 (45.15%), Query Frame = -2 Query: 32 SLVAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGH-LDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIV 739 S+VA P + A + + MG A G+P L E +G RM FL TA +G+ +++ F +P+ + A+ + PQ L+ +L A F YTY++P ++ + + ++L+L GV +GN G A+RSV TL L++ P+ A GA + + +WG A A + + VA + + + F + A+G+ GG ++ Sbjct: 115 SVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGET--IGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVI 349 The following BLAST results are available for this feature:
BLAST of EY679627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 101
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679627 ID=EY679627; Name=EY679627; organism=Citrus sinensis; type=EST; length=1007bpback to top |