EY679627

Overview
NameEY679627
Unique NameEY679627
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_PSEPG (Probable sugar efflux transporter OS=Pseudomonas putida (strain GB-1) GN=sotB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.236e-13
Identity = 65/231 (28.14%), Postives = 101/231 (43.72%), Query Frame = -2
Query:   44 VAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLL-LVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFG 733
            VAPP      + +A  ++  G   A  LGIPLG +     LG R+ FL  A V +  +L  M  +P L  + +  +  LP LF  P   +  + V L+  A F AY+Y+ PF  + +   G     +LLL+G AGV G++     ++R     L+  + L+      L P      + A  L   WG A  +F          +A    +  M LF  ++ + I  G+  G
Sbjct:  135 VAPP----GQQAKALGLLATGTTLAMVLGIPLGRVVGEA-LGWRITFLSIAGVALATMLCLMKSLPLLPSQNSGSLRSLPILFKRPALVITYLLVTLVITAQFTAYSYIEPFALHVAQIGGERTTLVLLLFGGAGVFGSLLFSRYSDRFPHGFLVGSIGLLAACLLLLLPLSGNFYAFAA-LSMFWGVAILSFSLSLQSKTLKLASDATDVAMALFSGIYNIGIGGGALLG 359          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: NEPI_ECOUT (Purine ribonucleoside efflux pump nepI OS=Escherichia coli (strain UTI89 / UPEC) GN=nepI PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 7.236e-13
Identity = 52/208 (25.00%), Postives = 89/208 (42.79%), Query Frame = -2
Query:   29 LGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 652
            LG  LG L     +G R  F   A +G+  +   +  +P L  E + +  +   L   P    G+IA+ +     FA +TY+ P + N +GF    +  +LL +G+A  +G   + F   RSV+  L     ++  S  +   + +    A  +  +WG  F   P   S W+        E+   + VA+ Q+    G+  GG  +D
Sbjct:  163 LGSFLGEL-----IGWRNVFNAAAAMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPFVLALSALVLTLWGSDKIVATGVAIIWGLTFALIPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALD 365          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: NEPI_ECOL5 (Purine ribonucleoside efflux pump nepI OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=nepI PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 7.236e-13
Identity = 52/208 (25.00%), Postives = 89/208 (42.79%), Query Frame = -2
Query:   29 LGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 652
            LG  LG L     +G R  F   A +G+  +   +  +P L  E + +  +   L   P    G+IA+ +     FA +TY+ P + N +GF    +  +LL +G+A  +G   + F   RSV+  L     ++  S  +   + +    A  +  +WG  F   P   S W+        E+   + VA+ Q+    G+  GG  +D
Sbjct:  163 LGSFLGEL-----IGWRNVFNAAAAMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPFVLALSALVLTLWGSDKIVATGVAIIWGLTFALIPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALD 365          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: NEPI_ECOK1 (Purine ribonucleoside efflux pump nepI OS=Escherichia coli O1:K1 / APEC GN=nepI PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 7.236e-13
Identity = 52/208 (25.00%), Postives = 89/208 (42.79%), Query Frame = -2
Query:   29 LGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 652
            LG  LG L     +G R  F   A +G+  +   +  +P L  E + +  +   L   P    G+IA+ +     FA +TY+ P + N +GF    +  +LL +G+A  +G   + F   RSV+  L     ++  S  +   + +    A  +  +WG  F   P   S W+        E+   + VA+ Q+    G+  GG  +D
Sbjct:  163 LGSFLGEL-----IGWRNVFNAAAAMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPFVLALSALVLTLWGSDKIVATGVAIIWGLTFALIPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALD 365          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: NEPI_ECO27 (Purine ribonucleoside efflux pump nepI OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=nepI PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.236e-13
Identity = 63/247 (25.51%), Postives = 105/247 (42.51%), Query Frame = -2
Query:   29 SSKLTLPWVSLVAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLG-HLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 766
            S+ LT+    LV P   P     +A S+I      A  +  PLG  L E   +G R  F   A +G+  +   +  +P L  E + +  +   L   P    G+IA+ +     FA +TY+ P + N +GF    +  +LL +G+A  +G   + F   RSV+  L     ++  S  +   + +    A  +  +WG  F   P   S W+        E+   + VA+ Q+    G+  GG  +D
Sbjct:  129 SASLTM---RLVPPRTVP-----KALSVIFGAVSIALVIAAPLGGFLGEL--IGWRNVFNAAAAMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPFVLALSALVLTLWGSDKIVATGVAIIWGLTFALIPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALD 365          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: NEPI_SHIDS (Purine ribonucleoside efflux pump nepI OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=nepI PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 9.450e-13
Identity = 53/208 (25.48%), Postives = 89/208 (42.79%), Query Frame = -2
Query:   29 LGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 652
            LG  LG L     +G R  F   AV+G+  +   +  +P L  + + +  +   L   P    G+IA+ +     FA +TY+ P + N +GF    +  +LL +G+A  +G   + F   RSV+  L    L++  S  +     +    A  +  +WG  F   P   S W         E+   + VA+ Q+    G+  GG  +D
Sbjct:  163 LGSFLGEL-----IGWRNVFNAAAVMGVLCIFWIIKSLPSLPGKPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLCGSDKIVATGVAIIWGLTFALVPVGWSTWSTRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALD 365          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_PSEPK (Probable sugar efflux transporter OS=Pseudomonas putida (strain KT2440) GN=sotB PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.234e-12
Identity = 63/231 (27.27%), Postives = 104/231 (45.02%), Query Frame = -2
Query:   44 VAPPCFPWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIAL-WGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFG 733
            VAPP      + +A  ++  G   A  LGIPLG +     LG R+ FL  A V +  +L  +  +P L  + +  +  LP LF  P   +  + V L+  A F AY+Y+ PF  + +   G     LLLL+G AGV G++     + R   H  L+ ++ +  +  L     +G      ++++ WG A  +F          +A    +  M LF  ++ + I  G+  G
Sbjct:  135 VAPP----GQQAKALGLLATGTTLAMVLGIPLGRVVGEA-LGWRITFLSIAGVALATMLCLIKSLPLLPSQNSGSLRSLPVLFKRPALVITYLLVTLVITAQFTAYSYIEPFALHVAQIGGDRTTLLLLLFGGAGVFGSLLFSRYSER-FPHGFLVGSIGVLAACLLLMLPLSGNFYVFAVLSMFWGVAILSFSLALQSKTLKLASDATDVAMALFSGIYNIGIGGGALLG 359          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: NEPI_ECOL6 (Purine ribonucleoside efflux pump nepI OS=Escherichia coli O6 GN=nepI PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.234e-12
Identity = 52/208 (25.00%), Postives = 89/208 (42.79%), Query Frame = -2
Query:   29 LGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHTLLLVALMIGTSTALFPYFATGMSGAVMLIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFGGQIVD 652
            LG  LG L     +G R  F   A +G+  +   +  +P L  E + +  +   L   P    G+IA+ +     FA +TY+ P + N +GF    +  +LL +G+A  +G   + F   RSV+  L     ++  S  +   + +    A  +  +WG  F   P   S W+        E+   + VA+ Q+    G+  GG  +D
Sbjct:  163 LGSFLGEL-----IGWRNVFNAAAAMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPFVLALSALVLTLWGSYKIVATGVAIIWGLTFALIPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALD 365          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_HAEIN (Probable sugar efflux transporter OS=Haemophilus influenzae GN=sotB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.750e-12
Identity = 55/228 (24.12%), Postives = 104/228 (45.61%), Query Frame = -2
Query:   44 PWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHT---LLLVALMIGTSTALFPYFATGMSGAVM-LIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFG 715
            P   + +A  ++ +G   A  LG+P+G +  +  +G R+ F + AV+ + ++   + L+P L  + A  I+ LP L   P      +   ++  AHF AYTY+ PF  +    D     ++LL++G +G+     A    NR  R      ++V++ +   + L   F+T    A+  L+ +WG           + +  +AP   +    ++  +F   I  G+ FG
Sbjct:  131 PKHKKTQALGMLAIGTALATILGLPIGRIVGQL-VGWRVTFGIIAVLALSIMFLIIRLLPNLPSKNAGSIASLPLLAKRPLLLWLYVTTAIVISAHFTAYTYIEPFMIDVGHLDPNFATAVLLVFGFSGIA----ASLLFNRLYRFAPTKFIVVSMSLLMFSLLLLLFSTKTIIAMFSLVFIWGIGISCIGLSLQMRVLKLAPDATDVATAIYSGIFNAGIGAGALFG 353          
BLAST of EY679627 vs. ExPASy Swiss-Prot
Match: SOTB_HAEIG (Probable sugar efflux transporter OS=Haemophilus influenzae (strain PittGG) GN=sotB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.750e-12
Identity = 55/228 (24.12%), Postives = 104/228 (45.61%), Query Frame = -2
Query:   44 PWRGRCEAPSIILMG*PWAPFLGIPLGHLDERP*LGGRMPFLVTAVVGIPVLLAQMFLVPRLEPEKAIRISDLPALFINPQARVGLIAVLLIGLAHFAAYTYVAPFFKNSSGFDGPTIGSLLLLYGVAGVMGNVFAGFAANRSVRHT---LLLVALMIGTSTALFPYFATGMSGAVM-LIALWGFAFGAFPACASIWMFVVAPKDVERGMPLFVALFQVIIAVGSFFG 715
            P   + +A  ++ +G   A  LG+P+G +  +  +G R+ F + AV+ + ++   + L+P L  + A  I+ LP L   P      +   ++  AHF AYTY+ PF  +    D     ++LL++G +G+     A    NR  R      ++V++ +   + L   F+T    A+  L+ +WG           + +  +AP   +    ++  +F   I  G+ FG
Sbjct:  131 PKHKKTQALGMLAIGTALATILGLPIGRIVGQL-VGWRVTFGIIAVLALSIMFLIIRLLPNLPSKNAGSIASLPLLAKRPLLLWLYVTTAIVISAHFTAYTYIEPFMIDVGHLDPNFATAVLLVFGFSGIA----ASLLFNRLYRFAPTKFIVVSMSLLMFSLLLLLFSTETIIAMFSLVFIWGIGISCIGLSLQMRVLKLAPDATDVATAIYSGIFNAGIGAGALFG 353          
The following BLAST results are available for this feature:
BLAST of EY679627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
SOTB_PSEPG7.236e-1328.14Probable sugar efflux transporter OS=Pseudomonas p... [more]
NEPI_ECOUT7.236e-1325.00Purine ribonucleoside efflux pump nepI OS=Escheric... [more]
NEPI_ECOL57.236e-1325.00Purine ribonucleoside efflux pump nepI OS=Escheric... [more]
NEPI_ECOK17.236e-1325.00Purine ribonucleoside efflux pump nepI OS=Escheric... [more]
NEPI_ECO277.236e-1325.51Purine ribonucleoside efflux pump nepI OS=Escheric... [more]
NEPI_SHIDS9.450e-1325.48Purine ribonucleoside efflux pump nepI OS=Shigella... [more]
SOTB_PSEPK1.234e-1227.27Probable sugar efflux transporter OS=Pseudomonas p... [more]
NEPI_ECOL61.234e-1225.00Purine ribonucleoside efflux pump nepI OS=Escheric... [more]
SOTB_HAEIN2.750e-1224.12Probable sugar efflux transporter OS=Haemophilus i... [more]
SOTB_HAEIG2.750e-1224.12Probable sugar efflux transporter OS=Haemophilus i... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-C07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679627 ID=EY679627; Name=EY679627; organism=Citrus sinensis; type=EST; length=1007bp
CCTGCGGGTCCNGGTCCCGGAATTCCGGGTCGACAATCTGCCCGCCAAAG
AACGAGCCCACGGCAATGATCACCTGGAACAACGCGACGAACAGCGGCAT
GCCACGTTCCACATCCTTGGGCGCCACCACAAACATCCAGATACTCGCGC
AGGCCGGGAAGGCGCCGAAGGCGAAGCCCCACAGTGCGATCAGCATCACG
GCGCCGCTCATGCCGGTGGCGAAGTAGGGGAACAGGGCAGTGCTGGTGCC
GATCATCAGGGCCACCAGCAGCAGGGTGTGGCGCACGCTGCGGTTGGCGG
CGAAGCCGGCGAAGACGTTGCCCATTACGCCGGCCACGCCGTAGAGCAGC
AGCAGCGAGCCAATGGTCGGGCCGTCGAAGCCGGAGCTGTTTTTGAAGAA
CGGGGCGACGTAGGTGTAGGCGGCAAAGTGCGCGAGGCCGATCAGCAGCA
CGGCGATCAAGCCGACCCGGGCTTGTGGGTTGATGAACAGGGCCGGCAGG
TCGCTGATGCGGATGGCTTTTTCCGGTTCGAGGCGCGGCACCAGGAACAT
CTGCGCCAGCAGTACCGGGATGCCCACCACCGCGGTGACAAGGAAAGGCA
TGCGCCCGCCCAATCAGGGCCGCTCATCCAGGTGGCCAAGGGGTATGCCG
AGGAAGGGGGCCCAGGGTCAGCCCATCAGGATGATTGAGGGGGCTTCACA
ACGCCCACGCCATGGGAAGCAGGGGGGCGCGACTAAAGAAACCCAGGGTA
AGGTCAACTTGGAGGAAAAAACTTAAACTTTTACAGTGGCCACCAAATTA
AAGTCAGGGGCCCCATTCTTCCCAGCTGCGGCGGGGGAAAACGCAGGCAG
TCCCCAAATGTATATGCCTTGGTGCGAAAATTCCCCTGTTTCTGCCAGCG
GGGGGATGAACGAAGGGAGGGCCGCCCCCTAGCGTGCGCCTGATAGGAAC
AAAGAGTGCACCACACACAAGAAAAAAAAAAAGGAAGTAAAACGCACGAA
GAAAGAA
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