EY679620

Overview
NameEY679620
Unique NameEY679620
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 6.854e-63
Identity = 131/246 (53.25%), Postives = 152/246 (61.79%), Query Frame = 1
Query:   16 INMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKP--PRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIYALXXXXXXXXXXXXXKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFT*QALSDMVWIW---GVD*KPLERFSYINSV 738
            INMKGLDGIQGP+YVGTGC F RQALYGYD  + ++   P                                    ++ +             +S LM Q   EK+FGQSPVFIA+T  E GG+P   + A+LL EAIHVISCGYEDKT+WGKEIGWIYGSVTEDILTGFKMH  GW S+YC P RPAFKGSAPINLSDRL+QVLRWALGS+EI     LS    IW       + LER +YIN++
Sbjct:  616 INMKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCCGSRKKGKSSKKYNYEKRRGINRSDSNAPLFNMEDIDEGFEGYDDERSILMSQRSVEKRFGQSPVFIAATFMEQGGIPPTTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLRWALGSIEIL----LSRHCPIWYGYHGRLRLLERIAYINTI 857          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.994e-62
Identity = 129/246 (52.44%), Postives = 152/246 (61.79%), Query Frame = 1
Query:   16 INMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKP--PRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIYALXXXXXXXXXXXXXKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFT*QALSDMVWIW---GVD*KPLERFSYINSV 738
            IN+KGLDGIQGP+YVGTGC F RQALYGYD  + ++   P                                    ++ +              S L+ Q + EK+FGQSPVFIA+T  E GG+P+  +  +LL EAIHVISCGYE KTDWGKEIGWIYGSVTEDILTGFKMH  GW S+YC+P RPAFKGSAPINLSDRL+QVLRWALGS+EI     LS    IW       K LER +YIN++
Sbjct:  603 INLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCFGSRKKGKSRKIPNYEDNRSIKRSDSNVPLFNMEDIDEDVEGYEDEMSLLVSQKRLEKRFGQSPVFIAATFMEQGGLPSTTNPLTLLKEAIHVISCGYEAKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCVPSRPAFKGSAPINLSDRLNQVLRWALGSIEIL----LSRHCPIWYGYNGRLKLLERIAYINTI 844          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.695e-59
Identity = 110/150 (73.33%), Postives = 125/150 (83.33%), Query Frame = 1
Query:  289 KSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFT*QALSDMVWIWGVD*KPLERFSYINSV 738
            KSSLM Q  FEK+FG SPVFIASTL E GG+P   +T+SL+ EAIHVISCGYE+KT+WGKEIGWIYGSVTEDILTGF+MHC GW+SVYC+PKRPAFKGSAPINLSDRLHQVLRWALGSVEIF       + + WG   K LER +YIN++
Sbjct:  677 KSSLMSQKNFEKRFGMSPVFIASTLMENGGLPEATNTSSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFF-SRHCPLWYAWGGKLKILERLAYINTI 825          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 6.214e-56
Identity = 109/152 (71.71%), Postives = 124/152 (81.58%), Query Frame = 1
Query:  289 KSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGAST--ASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFT*QALSDMVWIWGVD*KPLERFSYINSV 738
            +SSLM Q  FEK+FGQSPVFIASTL E GG+P GA+   A+L+ EAIHVISCGYE+KT+WGKEIGWIYGSVTEDILTGFKMHC GW+SVYC P R AFKGSAPINLSDRLHQVLRWALGSVEIF       + + +G   K LERF+Y N++
Sbjct:  689 RSSLMSQKSFEKRFGQSPVFIASTLVEDGGLPQGAAADPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCTPARAAFKGSAPINLSDRLHQVLRWALGSVEIFM-SRHCPLWYAYGGRLKWLERFAYTNTI 839          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.619e-43
Identity = 103/233 (44.21%), Postives = 125/233 (53.65%), Query Frame = 1
Query:   16 INMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIYALXXXXXXXXXXXXXKSSLMPQIKFEKKFGQSPVFIAST---------LKEAGGV----PTGAST-------ASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 654
            +NM+ LDGI GP+YVGTGC+FRR ALYG+D      PPR                                  +   +                 M   +F KKFG S   I S          L +  GV    P GA T       AS + EAI VISC YEDKT+WG+ +GWIYGSVTED++TG++MH  GW+SVYC+ KR AF+G+APINL+DRLHQVLRWA GSVEIF
Sbjct:  713 VNMRALDGIMGPVYVGTGCLFRRIALYGFD------PPRSKEHSGCCSCCFPQRRKV----------------KTSTVASEERQALRMADFDDEEMNMSQFPKKFGNSNFLINSIPIAEFQGRPLADHPGVKNGRPPGALTVPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIF 923          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.619e-43
Identity = 103/233 (44.21%), Postives = 125/233 (53.65%), Query Frame = 1
Query:   16 INMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIYALXXXXXXXXXXXXXKSSLMPQIKFEKKFGQSPVFIAST---------LKEAGGV----PTGAST-------ASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 654
            +NM+ LDGI GP+YVGTGC+FRR ALYG+D      PPR                                  +   +                 M   +F KKFG S   I S          L +  GV    P GA T       AS + EAI VISC YEDKT+WG+ +GWIYGSVTED++TG++MH  GW+SVYC+ KR AF+G+APINL+DRLHQVLRWA GSVEIF
Sbjct:  713 VNMRALDGIMGPVYVGTGCLFRRIALYGFD------PPRSKEHSGCCSCCFPQRRKV----------------KTSTVASEERQALRMADFDDEEMNMSQFPKKFGNSNFLINSIPIAEFQGRPLADHPGVKNGRPPGALTVPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIF 923          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.292e-42
Identity = 98/233 (42.06%), Postives = 121/233 (51.93%), Query Frame = 1
Query:   16 INMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIYALXXXXXXXXXXXXXKSSLMPQIKFEKKFGQSPVFI-------------ASTLKEAGGVPTGAST-------ASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 654
            +NM+ LDG+QGP+YVGTGC+FRR ALYG+D      PPR                                  ++                    M    F KKFG S   I             A       G P GA T       AS++ EAI V+SC YE+KT+WG  +GWIYGSVTED++TG++MH  GW+SVYC+  R AF+G+APINL+DRLHQVLRWA GSVEIF
Sbjct:  667 VNMRALDGLQGPVYVGTGCLFRRIALYGFD------PPRSKDHTTPWSCCLPRRRRTRSQPQPQEEEEETMALRM---------------DMDGAMNMASFPKKFGNSSFLIDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRETLDASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIF 878          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 2.292e-42
Identity = 98/233 (42.06%), Postives = 121/233 (51.93%), Query Frame = 1
Query:   16 INMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIYALXXXXXXXXXXXXXKSSLMPQIKFEKKFGQSPVFI-------------ASTLKEAGGVPTGAST-------ASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 654
            +NM+ LDG+QGP+YVGTGC+FRR ALYG+D      PPR                                  ++                    M    F KKFG S   I             A       G P GA T       AS++ EAI V+SC YE+KT+WG  +GWIYGSVTED++TG++MH  GW+SVYC+  R AF+G+APINL+DRLHQVLRWA GSVEIF
Sbjct:  667 VNMRALDGLQGPVYVGTGCLFRRIALYGFD------PPRSKDHTTPWSCCLPRRRRTRSQPQPQEEEEETMALRM---------------DMDGAMNMASFPKKFGNSSFLIDSIPVAEFQGRPLADHPSVKNGRPPGALTIPRETLDASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIF 878          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.910e-42
Identity = 101/232 (43.53%), Postives = 121/232 (52.16%), Query Frame = 1
Query:   19 NMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIYALXXXXXXXXXXXXXKSSLMPQIKFEKKFGQSPVF-------------IASTLKEAGGVPTGAST-------ASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 654
            NM+ LDG+QGP+YVGTGC+FRR ALYG++      PPR                                  Q  A                +  P +   KKFG S +F             +A  +    G P GA         A  + EAI VISC YED T+WG  IGWIYGSVTED++TG++MH  GWRSVYCI KR AF+G+APINL+DRLHQVLRWA GSVEIF
Sbjct:  580 NMRALDGLQGPVYVGTGCMFRRYALYGFN------PPRANEYSGVFGQEKAPAMHVRT--------------QSQASQTSQASDLESDTQPLNDDPDLGLPKKFGNSTMFTDTIPVAEYQGRPLADHMSVKNGRPPGALLLPRPPLDAPTVAEAIAVISCWYEDNTEWGDRIGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGTAPINLTDRLHQVLRWATGSVEIF 791          
BLAST of EY679620 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 5.107e-42
Identity = 99/234 (42.31%), Postives = 124/234 (52.99%), Query Frame = 1
Query:   16 INMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIYALXXXXXXXXXXXXXKSSLMPQIKFEKKFGQSPVFIAS-------------------TLKEAGG--VPTGASTASLLNEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 654
            ++M+ LDG+QGP+YVGTGC+FRR ALYG+       PPR                                                    +S L+P     K+FG S  F+AS                     + AG   VP     A+ + EAI VISC YEDKT+WGK +GWIYGSVTED++TG++MH  GWRS+YC+ KR AF+G+APINL+DRLHQVLRWA GSVEIF
Sbjct:  716 VSMRALDGLQGPMYVGTGCIFRRTALYGFS------PPRATEHHGWLGRRKVKISLRRPKAMMKKDDEVSLPIN----GEYNEEENDDGDIESLLLP-----KRFGNSNSFVASIPVAEYQGRLIQDLQGKGKNSRPAGSLAVPREPLDAATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIF 934          
The following BLAST results are available for this feature:
BLAST of EY679620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA1_ARATH6.854e-6353.25Cellulose synthase A catalytic subunit 1 [UDP-form... [more]
CESAA_ARATH1.994e-6252.44Probable cellulose synthase A catalytic subunit 10... [more]
CESA4_ARATH2.695e-5973.33Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA7_ORYSJ6.214e-5671.71Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CSLD2_ORYSJ4.619e-4344.21Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD2_ORYSI4.619e-4344.21Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD1_ORYSJ2.292e-4242.06Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ORYSI2.292e-4242.06Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ARATH3.910e-4243.53Cellulose synthase-like protein D1 OS=Arabidopsis ... [more]
CSLD5_ARATH5.107e-4242.31Cellulose synthase-like protein D5 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-B12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679620 ID=EY679620; Name=EY679620; organism=Citrus sinensis; type=EST; length=941bp
CCACGCGTCCGGTAGATAAACATGAAAGGATTGGACGGGATCCAGGGTCC
CATTTATGTTGGAACTGGGTGCGTCTTCAGGAGGCAGGCACTCTATGGAT
ACGATGCTCCCGTCAAGAAGAAACCTCCAAGGAAGACCTGTAACTGTTTG
CCAAAATGGTGTTGCTGTTGTTGCAGATCTAGAAAGAAGAGTAAGAAAGG
GAAGTCAAATAAGAAGAACAAGGACACTTCCAAGCAGATATATGCACTAG
AAAATATCGAGGAGGGAATTGAAGGTATAGATAATGAGAAATCATCCCTG
ATGCCCCAAATAAAATTTGAGAAAAAGTTTGGACAATCACCAGTTTTCAT
TGCGTCTACTTTGAAGGAAGCCGGTGGAGTTCCAACAGGAGCTTCAACCG
CATCACTCTTGAACGAAGCAATCCACGTTATCAGCTGCGGCTATGAGGAT
AAAACTGATTGGGGTAAAGAGATTGGATGGATTTATGGATCTGTTACAGA
GGATATATTAACAGGCTTTAAAATGCATTGCCATGGTTGGCGATCTGTGT
ATTGCATACCAAAAAGGCCAGCTTTCAAGGGTTCGGCTCCTATAAACCTC
TCAGATCGTCTACACCAGGTTCTTCGTTGGGCACTAGGATCTGTTGAGAT
TTTTACTTAACAGGCATTGTCCGATATGGTATGGATATGGGGTGTGGATT
GAAAACCACTGGAGCGCTTCTCGTATATAAACTCCGTTGGTTTATCCCAA
AACATCCATTCCCTTGATTCCAAAATTGTACCTTGCCTGGCTATCGGCCC
CCTTTACTGGGAAATTTCATTGTTCCCTGAAAATAACCAACCTATGCCCA
TTAATCCTTTTTCGGGGCCCTTTTTCTATACCTTAAGCTGCCACAGGGGA
TTTTTTTGAAAAGGGAAAGGGGGGGAGGGTTGTGGGCGTAA
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