EY679615

Overview
NameEY679615
Unique NameEY679615
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length958
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_BACC0 (10 kDa chaperonin OS=Bacillus cereus (strain AH820) GN=groS PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.996e-18
Identity = 41/92 (44.57%), Postives = 66/92 (71.74%), Query Frame = 3
Query:  300 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 572
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_BACAN (10 kDa chaperonin OS=Bacillus anthracis GN=groS PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.996e-18
Identity = 41/92 (44.57%), Postives = 66/92 (71.74%), Query Frame = 3
Query:  300 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 572
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_BACAC (10 kDa chaperonin OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=groS PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.996e-18
Identity = 41/92 (44.57%), Postives = 66/92 (71.74%), Query Frame = 3
Query:  300 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 572
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_BACAA (10 kDa chaperonin OS=Bacillus anthracis (strain A0248) GN=groS PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.996e-18
Identity = 41/92 (44.57%), Postives = 66/92 (71.74%), Query Frame = 3
Query:  300 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 572
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_PELLD (10 kDa chaperonin OS=Pelodictyon luteolum (strain DSM 273) GN=groS PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.175e-17
Identity = 45/93 (48.39%), Postives = 62/93 (66.67%), Query Frame = 3
Query:  297 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 572
            ++KPL DRV+VK    EEKT GG+++P   + KP  GEVVAVG GK     + L + VK G +V+Y KY+GTE+   G ++LI+RE D+  IL
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPMYGEVVAVGAGKMSDSGQLLAMPVKAGDKVLYGKYSGTEVSVEGEDYLIMRESDIFAIL 94          
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_LISMO (10 kDa chaperonin OS=Listeria monocytogenes GN=groS PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.175e-17
Identity = 42/91 (46.15%), Postives = 65/91 (71.43%), Query Frame = 3
Query:  300 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 569
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +    K  + V  G  VI++KY+GTE+ + G ++LI+RE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92          
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_LISMH (10 kDa chaperonin OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=groS PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.175e-17
Identity = 42/91 (46.15%), Postives = 65/91 (71.43%), Query Frame = 3
Query:  300 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 569
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +    K  + V  G  VI++KY+GTE+ + G ++LI+RE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92          
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_LISMF (10 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain F2365) GN=groS PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.175e-17
Identity = 42/91 (46.15%), Postives = 65/91 (71.43%), Query Frame = 3
Query:  300 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 569
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +    K  + V  G  VI++KY+GTE+ + G ++LI+RE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92          
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_LISMC (10 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=groS PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.175e-17
Identity = 42/91 (46.15%), Postives = 65/91 (71.43%), Query Frame = 3
Query:  300 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 569
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +    K  + V  G  VI++KY+GTE+ + G ++LI+RE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92          
BLAST of EY679615 vs. ExPASy Swiss-Prot
Match: CH10_LISIN (10 kDa chaperonin OS=Listeria innocua GN=groS PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.175e-17
Identity = 42/91 (46.15%), Postives = 65/91 (71.43%), Query Frame = 3
Query:  300 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 569
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +    K  + V  G  VI++KY+GTE+ + G ++LI+RE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92          
The following BLAST results are available for this feature:
BLAST of EY679615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 487
Match NameE-valueIdentityDescription
CH10_BACC08.996e-1844.5710 kDa chaperonin OS=Bacillus cereus (strain AH820... [more]
CH10_BACAN8.996e-1844.5710 kDa chaperonin OS=Bacillus anthracis GN=groS PE... [more]
CH10_BACAC8.996e-1844.5710 kDa chaperonin OS=Bacillus anthracis (strain CD... [more]
CH10_BACAA8.996e-1844.5710 kDa chaperonin OS=Bacillus anthracis (strain A0... [more]
CH10_PELLD1.175e-1748.3910 kDa chaperonin OS=Pelodictyon luteolum (strain ... [more]
CH10_LISMO1.175e-1746.1510 kDa chaperonin OS=Listeria monocytogenes GN=gro... [more]
CH10_LISMH1.175e-1746.1510 kDa chaperonin OS=Listeria monocytogenes seroty... [more]
CH10_LISMF1.175e-1746.1510 kDa chaperonin OS=Listeria monocytogenes seroty... [more]
CH10_LISMC1.175e-1746.1510 kDa chaperonin OS=Listeria monocytogenes seroty... [more]
CH10_LISIN1.175e-1746.1510 kDa chaperonin OS=Listeria innocua GN=groS PE=3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-B07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679615 ID=EY679615; Name=EY679615; organism=Citrus sinensis; type=EST; length=958bp
GTTTTATCTTCTCGACCCTTCTTCAAATTTCAACTAGAAACCTTATCAAA
CTACTCGCTCGCTTCTCGCTTATCATTTCCAATCAGAATCTCTCTCGCTC
TCTCTGCATCTGCAAGCAGATGGCGACAGCTCACCTAACAGCGTCATCAA
TTAAGGTTCCAGCAAGGAGCTTGACTTCATTCGATGGTCTCAGACCGTCT
TCCGTCAAGTTCGCTTCCGTCGGAGGTGCTGCCAGCCAACGCTCTTTCCG
TCGCTTGGTCGTTAAAGCCGCTGCAGTCGTGGCTCCCAAGTACACTTCAA
TTAAACCTTTGGGTGATAGAGTGCTGGTGAAAATCAAGACTGTAGAGGAG
AAAACTGATGGTGGTATTTTTCTGCCATCTGCAGCTCAAACAAAGCCTCA
AGCAGGTGAGGTGGTAGCTGTTGGCGAGGGGAAGACAGTTGGGAAGGCTA
AACTGGACATATCTGTGAAGCCTGGGACCCAGGTCATCTATTCGAAGTAT
GCAGGGACTGAGTTGGAGTTCAACGGCGCAAATCATCTCATAGTGAGGGA
GGATGACGTAGTTGGCATTCTTGAAACAGATGAAATCAAGGATCTTAAGC
CCCTTAATGACAGAGTTTTCATCAAGGTTGCTGAGGCTGAGGAGACAACT
GCTGGAAGTTTGTTGTTGACGGAAGGCAAGCAAGAGAAACCTTTCATTGG
AACGGTCTTTGCTGTTGGAACCGGTCCTCTAAATGAGGAAGGAATAAGGA
AACCTCTATCCTTTGCACCAGGGAACCCGGGGATGTTTTCCAAGTTAGCA
GGGAAAGGATTTCCAGGGGAATGAGAGGGACCCACTCAATTTGTTTTAAA
AACTTTCAAAAAGGGAGGGGTGGGGCCCCTCCTTATTTTGTCCTGGTTTT
TTACTTAGAGCGAAGGGCCTTTTAAAAGTAAAAAAAGGGAAATTGAAATT
TTTTAAGG
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