EY679609
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_PROM9 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9312) GN=petC PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.911e-28 Identity = 65/142 (45.77%), Postives = 86/142 (60.56%), Query Frame = 2 Query: 137 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALT--LGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN + WL TH GDR+L +GLKGDPTYL+V + + + L+A+ LGCVVPW+S +F PC G QY+ +G VVR Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPVTKTGWLATHQAGDRSLVQGLKGDPTYLIVNEGGEIG---EFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVR 140
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_PROM0 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9301) GN=petC PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.164e-27 Identity = 66/142 (46.48%), Postives = 86/142 (60.56%), Query Frame = 2 Query: 137 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALT--LGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN I WL TH GDR+L +GLKGDPTYL+V + + + L+A+ LGCVVPW+S +F PC G QY+ +G VVR Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPITKTGWLATHQAGDRSLVQGLKGDPTYLIVNEVGEIG---EFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVR 140
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_PROM2 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9215) GN=petC PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.520e-27 Identity = 66/142 (46.48%), Postives = 85/142 (59.86%), Query Frame = 2 Query: 137 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALT--LGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 T + + VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN I WL TH GDR+L +GLKGDPTYL+V + + + L+A+ LGCVVPW+S +F PC G QY+ +G VVR Sbjct: 2 TQLSSKDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPITKTGWLATHQAGDRSLVQGLKGDPTYLIVNEGGGIG---EFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVR 140
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_PROMP (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=petC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.985e-27 Identity = 64/142 (45.07%), Postives = 86/142 (60.56%), Query Frame = 2 Query: 137 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALT--LGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN + WL +H GDR+L +GLKGDPTYL+V + + + L+A+ LGCVVPW+S +F PC G QY+ +G VVR Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPVTKTGWLASHQAGDRSLVQGLKGDPTYLIVNSEGEIG---EFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVR 140
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_PROM5 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9515) GN=petC PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.593e-27 Identity = 64/142 (45.07%), Postives = 85/142 (59.86%), Query Frame = 2 Query: 137 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALT--LGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN + WL H GDR+L +GLKGDPTYL+V + + + L+A+ LGCVVPW+S +F PC G QY+ +G VVR Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPVTKTGWLANHQAGDRSLVQGLKGDPTYLIVNSEGDIG---EFGLNAICTHLGCVVPWDSGANKFICPCHGSQYDTNGKVVR 140
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRIA_BIGNA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Bigelowiella natans GN=petC PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.867e-26 Identity = 68/179 (37.99%), Postives = 88/179 (49.16%), Query Frame = 2 Query: 20 QLCSRKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 QL + +G + P +F +R K QA D VPDMGKR+LMN L+L AV+ Y +F PP G GG A DA+GN + A W +H R L +G+KGDPTYL+V D + + LGCVVPW++ +F PC G QY G VVR Sbjct: 36 QLSAVRGKIAAPRTSFQNAVSRVSRNQLPSSSRKAVAQAFLSNPDMVPDMGKRKLMNNLVLAAVAPVVASAGGCYLYYFYPPQTGGGGGAVGALDALGNPVSAESWFKSHKKNARDLVQGIKGDPTYLIVNDDGSTLNSYGLNAICTHLGCVVPWDAASNKFKCPCHGSQYAPDGHVVR 214
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_SYNJB (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. GN=petC PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.595e-22 Identity = 55/132 (41.67%), Postives = 71/132 (53.79%), Query Frame = 2 Query: 161 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 P M +R L+N LL G+V + L P +F PP G G G A+DA+G I ++ L TH DR L +GLKGDPTY+V+ D + LGCVVPWN + F PC G QY +G V+R Sbjct: 11 PPMSRRVLLNALLSGSVGVVVVGALYPVVKYFIPPSAGGGGEGLIAQDALGKPISVSELLATHAATDRVLAQGLKGDPTYIVI--DNGAVANYGLNAVCTHLGCVVPWNVGENLFKCPCHGSQYAANGKVIR 140
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_SYNJA (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain JA-3-3Ab) GN=petC PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.246e-21 Identity = 54/132 (40.91%), Postives = 71/132 (53.79%), Query Frame = 2 Query: 161 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 P M +R +N LL +V + L P +F PP G AG G A+DA+G I ++ L TH DR L +GLKGDPTY+V+ D + LGCVVPWN+ + F PC G QY +G V+R Sbjct: 11 PPMSRRVFLNALLSSSVGVVVVGTLYPVVKYFIPPSSGGAGEGVIAQDALGKPISVSELLATHAATDRVLAQGLKGDPTYIVI--DNGAVANYGLNAVCTHLGCVVPWNAGENLFKCPCHGSQYAANGKVIR 140
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRIA_SYNY3 (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Synechocystis sp. (strain PCC 6803) GN=petC1 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.901e-18 Identity = 54/133 (40.60%), Postives = 69/133 (51.88%), Query Frame = 2 Query: 161 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPG-LGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 P +RQL+N L V++ FF PP G AGGG AKD +GN I A+ L PG R L GL GDPTYL+V++D +L + S LGC PWN + F PC G +Y+ G+V R Sbjct: 10 PSYSRRQLLNFLAGTTVAVTASAGAYAMGKFFVPPAEKGGAGGGIIAKDVLGNPIPASQIL-AEAPGTRALVAGLAGDPTYLIVKEDGSLD-SIGIVDSCTHLGCTFPWNGNDQEFQCPCHGSRYHPDGSVAR 140
BLAST of EY679609 vs. ExPASy Swiss-Prot
Match: UCRI_GLOVI (Cytochrome b6-f complex iron-sulfur subunit OS=Gloeobacter violaceus GN=petC PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.077e-17 Identity = 52/139 (37.41%), Postives = 70/139 (50.36%), Query Frame = 2 Query: 149 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLK---GDPTYLVVEQDKTLAIKWKSMLSALTLGCVVPWNSPKKRFN*PCTGCQYNKHGTVVR 556 A +P M +RQL++ + GA++ T L P +F PP G G AKD G DI + L PG+ LT GL GD TY+V+ K +A + LGCVVPW++ K+F PC G YN G + R Sbjct: 6 AQEIP-MSRRQLLSFVTGGAIAATTAATLYPVVLYFLPPSTAGGGEGVAAKDKEGKDISVSKLLAAATPGEPVLTLGLDVNGGDATYIVINDQKEIA-NFGINAVCTHLGCVVPWDNGAKQFKCPCHGSVYNADGGLER 142 The following BLAST results are available for this feature:
BLAST of EY679609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679609 ID=EY679609; Name=EY679609; organism=Citrus sinensis; type=EST; length=909bpback to top |