EY679347

Overview
NameEY679347
Unique NameEY679347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length974
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_METTP (30S ribosomal protein S7P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps7p PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.063e-28
Identity = 63/150 (42.00%), Postives = 100/150 (66.67%), Query Frame = 1
Query:    1 ISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAA 450
            +S+  YI ++       V HT GR++ ++F+K++  +VERL N +M   +N G+K +A RIV+ A +IIH  T +NP+ V+V A+ N+GPRE+  R+   G+   +AVD +P RRV+ A+ LI  GA +++F++ R+I  CLADE+I AA
Sbjct:   17 LSVKGYINLKPR----IVLHTGGRHAKQQFKKSELHVVERLINKMMRKEKNTGQKQIAYRIVEEAFDIIHSRTKENPLSVLVRAISNAGPREEVVRLKYGGITVPKAVDTAPQRRVDTALMLIAKGAWQASFKSRRSIQNCLADEIIAAA 162          

HSP 2 Score: 24.6386 bits (52), Expect = 1.063e-28
Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 2
Query:  467 AYAIQKKDEIDRMAKANR 520
            ++A+ +KD I+R+AKA R
Sbjct:  168 SFAVSRKDSIERVAKAAR 185          
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_META3 (30S ribosomal protein S7P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps7p PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.167e-28
Identity = 67/150 (44.67%), Postives = 100/150 (66.67%), Query Frame = 1
Query:    4 SLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAAK 453
            SL  YI ++      +VPHT+GR S + F KA+  IVERL N+LM   +N G+K + + IV+ A EII   T++NP++V+V+A+ N GPRE+ TRI   G+   Q+VD+SP RR++ A+  I  G   SA +N ++ A+CLADE++ A+K
Sbjct:   20 SLRHYINLEPI----FVPHTSGRNSGRMFEKAKMNIVERLVNNLMRAEQNTGQKQVTLSIVEEAFEIIEKRTNENPVKVLVEALENGGPREETTRISYGGIAFLQSVDVSPSRRLDTALRNIAIGTLNSAHKNKKSAAQCLADEIMFASK 165          
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_METBF (30S ribosomal protein S7P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps7p PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.384e-28
Identity = 63/139 (45.32%), Postives = 94/139 (67.63%), Query Frame = 1
Query:   52 VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAAKGSSNS 468
            VPH++G+++ ++F K++  IVERL N+LM    N GKK   +R V+ A +I+   T QNPIQV+VDA+ N+GPRE+  R+   G+   +AVD +P RRV+ A+  I+ G   +AF++ R++AECLA ELI AA   + S
Sbjct:   30 VPHSSGKHARQQFNKSEISIVERLANNLMRTEINTGKKQKTLRAVEEAFDIVSKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNNAAFKSKRSVAECLATELIGAANRDTKS 168          

HSP 2 Score: 21.9422 bits (45), Expect = 1.384e-28
Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  467 AYAIQKKDEIDRMAKANR 520
            ++AI +KD  +R+AKA R
Sbjct:  168 SFAINRKDAKERVAKAAR 185          
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_METVS (30S ribosomal protein S7P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps7p PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.990e-28
Identity = 65/134 (48.51%), Postives = 91/134 (67.91%), Query Frame = 1
Query:   52 VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAAK 453
            +PHTAGR S K F K +  +VERL N LM    N GKK   + I++ A+ I+   T +NPIQV+VDA+ NSGPRE+ TRI   G+   Q+VD+SP RR++ A   I+ GA + A ++ ++IA+CLADEL+ A+K
Sbjct:   38 IPHTAGRNSKKMFDKNKMHVVERLANKLMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELVAASK 171          
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_METBU (30S ribosomal protein S7P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps7p PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.990e-28
Identity = 61/133 (45.86%), Postives = 97/133 (72.93%), Query Frame = 1
Query:   52 VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAA 450
            VPHT+G+++ ++F K+   IVERL N++M + +N GKK +A+RIV  A +I++  T +NP+QV+V+AV N+GPRE+  R+   G+   +AVD +P RRV+ A+  I+ G+ ++AF++ R+ AECLA ELI A+
Sbjct:   31 VPHTSGKHARQQFNKSDITIVERLVNNVMRNAQNTGKKQIALRIVDEAFDIVNSKTKKNPVQVLVEAVSNAGPREEVVRLKYGGISVPKAVDTAPQRRVDHALRNISIGSNQTAFKSKRSAAECLASELIAAS 163          
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_KORCO (30S ribosomal protein S7P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps7p PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.789e-28
Identity = 74/151 (49.01%), Postives = 94/151 (62.25%), Query Frame = 1
Query:   49 YVPHTAGRYSVKRFRKAQCPIVERLTNSLM------------MHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAAKGSSN 465
            Y+PHT GR+  K+F K + PIVERL N LM            ++ +N GKKL A+R VK+A EII L T +NPIQV +DA+ NS  RE+ TRI   GV    AVD SP R V+ AI  I  GA   AFR+ R++AE LA+E+I AA+   N
Sbjct:   39 YLPHTGGRHEHKKFGKLEIPIVERLVNRLMGQAMNSGSRKDHVNSKNQGKKLKAMRTVKYAFEIIELRTGKNPIQVFLDAIENSIIREEVTRIMYGGVSYFHAVDTSPSRMVDLAIRHIAQGAAMKAFRSPRSLAEALAEEIIAAAEYDRN 189          
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_HALSA (30S ribosomal protein S7P OS=Halobacterium salinarium GN=rps7p PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.561e-28
Identity = 64/135 (47.41%), Postives = 90/135 (66.67%), Query Frame = 1
Query:   46 TYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAA 450
            T V HT GR++ K+F+K++  IVERL N LM  G N GKK  A++IV+ A +I+H  TD+NPIQV+V AV N+ PRE+  R+   G+   QAVD +P RRV+QA+  +  GA  ++F+     AE LA++L  AA
Sbjct:   53 TPVAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGGISVPQAVDTAPQRRVDQALKFLADGAHSASFKTPTDAAEALANQLAGAA 187          
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_HALMA (30S ribosomal protein S7P OS=Haloarcula marismortui GN=rps7p PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.684e-27
Identity = 63/135 (46.67%), Postives = 87/135 (64.44%), Query Frame = 1
Query:   46 TYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAA 450
            T + HT GR++ K+F+K++  IVERL N LM    N GKK +A  IV  A E++H  TD+NPIQV+V AV NS PRE+  R+   G+   +AVD++P RRV+QA+  +  G    +F+   T AE LA +LI AA
Sbjct:   49 TPIAHTMGRHADKQFKKSEISIVERLINRLMQTDENTGKKQLATSIVTEAFELVHERTDENPIQVLVSAVENSAPREETVRLKYGGISVPKAVDVAPQRRVDQALKFLAEGVYGGSFKTTTTAAEALAQQLIGAA 183          
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_METHJ (30S ribosomal protein S7P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps7p PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.200e-27
Identity = 63/135 (46.67%), Postives = 88/135 (65.19%), Query Frame = 1
Query:   52 VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAAKG 456
            VPH+ GR + + F KA   IVERL N LM    N GKK +A+RIV+ A EI+H  T +NPI+V+ DAV N+GPRE+  R+   G+   ++VD +P+RRVN A+ LI  G   ++ +  + +A  LA+ELI AA G
Sbjct:   39 VPHSCGRLTRQEFHKANMLIVERLINQLMRTEVNTGKKQLAIRIVRDAFEIVHQKTKKNPIEVLCDAVANAGPREETVRLKYGGINVPKSVDTAPMRRVNTAVGLIAAGVYSASHKKKKPVANALAEELIAAANG 173          
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_CENSY (30S ribosomal protein S7P OS=Cenarchaeum symbiosum GN=rps7p PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.426e-26
Identity = 69/148 (46.62%), Postives = 95/148 (64.19%), Query Frame = 1
Query:   52 VPHTAGRYSVKRFRKAQCPIVERLTNSLMMH---------GRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAAKGSSNS 468
            +P+T GR ++KRF KA   IVERL N  MMH         GR  GKK+ ++  VK A EII+L T +NP++V+V AV NS P ED TRI   G V   +VD+SPLRRV+ A+  I  G +E+AFR  +++ E LA+ LI AA  ++++
Sbjct:   36 LPYTYGRSALKRFNKADANIVERLANK-MMHFGKKYAKNTGRMAGKKMGSINTVKTAFEIINLKTGRNPVEVLVRAVENSAPNEDTTRIVYGGTVYHVSVDVSPLRRVDLALRFIADGVKEAAFRKPKSLEEFLAEHLILAANNTTDA 182          
The following BLAST results are available for this feature:
BLAST of EY679347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
RS7_METTP1.063e-2842.0030S ribosomal protein S7P OS=Methanosaeta thermoph... [more]
RS7_META31.167e-2844.6730S ribosomal protein S7P OS=Methanococcus aeolicu... [more]
RS7_METBF1.384e-2845.3230S ribosomal protein S7P OS=Methanosarcina barker... [more]
RS7_METVS1.990e-2848.5130S ribosomal protein S7P OS=Methanococcus vanniel... [more]
RS7_METBU1.990e-2845.8630S ribosomal protein S7P OS=Methanococcoides burt... [more]
RS7_KORCO5.789e-2849.0130S ribosomal protein S7P OS=Korarchaeum cryptofil... [more]
RS7_HALSA7.561e-2847.4130S ribosomal protein S7P OS=Halobacterium salinar... [more]
RS7_HALMA1.684e-2746.6730S ribosomal protein S7P OS=Haloarcula marismortu... [more]
RS7_METHJ2.200e-2746.6730S ribosomal protein S7P OS=Methanospirillum hung... [more]
RS7_CENSY1.426e-2646.6230S ribosomal protein S7P OS=Cenarchaeum symbiosum... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-059-B10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679347 ID=EY679347; Name=EY679347; organism=Citrus sinensis; type=EST; length=974bp
ATCTCGTTGAGTGATTATATTGGCGTGCAAGCGGCCAAGCACGCTACTTA
TGTGCCTCACACTGCTGGGAGGTACTCAGTTAAGCGTTTCCGGAAGGCCC
AATGTCCCATTGTTGAGAGGCTTACGAACTCTCTTATGATGCACGGTCGT
AACAACGGCAAGAAATTGATGGCCGTCAGGATTGTTAAGCATGCCATGGA
GATCATTCACCTTTTGACCGACCAGAACCCAATTCAAGTCATTGTTGATG
CTGTCATCAACAGTGGTCCAAGGGAAGATGCTACCCGTATTGGATCTGCT
GGTGTTGTTAGGCGTCAGGCTGTGGATATTTCCCCATTGCGCCGTGTGAA
TCAAGCGATCTATCTAATCACCACTGGTGCTCGTGAATCTGCTTTTCGTA
ACATCAGGACTATTGCCGAATGCTTGGCCGATGAACTCATTAATGCTGCC
AAGGGTTCATCTAACAGCTTATGCCATCCAGAAAAAGGATGAGATTGATA
GAATGGCTAAAGCCAATCGCTGAAGTTCTGAAAATTGGATAATCCTATGC
ATTAAAGTTGTACTTTTTTTCATAAAAAAACTTTTTGGAACAATGGTTTA
TGTGCCTCTTTTGCAATTTTACCAATGGTTTGTTTCAAGGTTTTGAAGAG
TATGAAATTTGAGGATGGCTATTACTGGCTTTCCTGGGTATCCATTTTGC
CAAGGGGGGGGGAATGTTACAAAAGGAATTCTGGCCAAATTAAAATCAAA
TCTAGAAATTAAATGGGTTATTATAATTCCCGCCTGGTTGTGTATTTTAA
AAAATATAAAATATAAGGGGGGGGCCTCCTTCCTTGATGGGAACCCCGTT
TTACTTTATGGTCGTTGCTTGGTAAAACTTTTAAAAAACCTCATTCTTTA
ATAATTTCTACTAAATTATTACTAATTATATGGTGGACTGTCTTTTTCTT
ATTATGGTCCACAAATGCAAAGCG
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