EY679347
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_METTP (30S ribosomal protein S7P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps7p PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.063e-28 Identity = 63/150 (42.00%), Postives = 100/150 (66.67%), Query Frame = 1 Query: 1 ISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAA 450 +S+ YI ++ V HT GR++ ++F+K++ +VERL N +M +N G+K +A RIV+ A +IIH T +NP+ V+V A+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ LI GA +++F++ R+I CLADE+I AA Sbjct: 17 LSVKGYINLKPR----IVLHTGGRHAKQQFKKSELHVVERLINKMMRKEKNTGQKQIAYRIVEEAFDIIHSRTKENPLSVLVRAISNAGPREEVVRLKYGGITVPKAVDTAPQRRVDTALMLIAKGAWQASFKSRRSIQNCLADEIIAAA 162 HSP 2 Score: 24.6386 bits (52), Expect = 1.063e-28 Identity = 9/18 (50.00%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 467 AYAIQKKDEIDRMAKANR 520 ++A+ +KD I+R+AKA R Sbjct: 168 SFAVSRKDSIERVAKAAR 185
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_META3 (30S ribosomal protein S7P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps7p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.167e-28 Identity = 67/150 (44.67%), Postives = 100/150 (66.67%), Query Frame = 1 Query: 4 SLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAAK 453 SL YI ++ +VPHT+GR S + F KA+ IVERL N+LM +N G+K + + IV+ A EII T++NP++V+V+A+ N GPRE+ TRI G+ Q+VD+SP RR++ A+ I G SA +N ++ A+CLADE++ A+K Sbjct: 20 SLRHYINLEPI----FVPHTSGRNSGRMFEKAKMNIVERLVNNLMRAEQNTGQKQVTLSIVEEAFEIIEKRTNENPVKVLVEALENGGPREETTRISYGGIAFLQSVDVSPSRRLDTALRNIAIGTLNSAHKNKKSAAQCLADEIMFASK 165
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_METBF (30S ribosomal protein S7P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps7p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.384e-28 Identity = 63/139 (45.32%), Postives = 94/139 (67.63%), Query Frame = 1 Query: 52 VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAAKGSSNS 468 VPH++G+++ ++F K++ IVERL N+LM N GKK +R V+ A +I+ T QNPIQV+VDA+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ I+ G +AF++ R++AECLA ELI AA + S Sbjct: 30 VPHSSGKHARQQFNKSEISIVERLANNLMRTEINTGKKQKTLRAVEEAFDIVSKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNNAAFKSKRSVAECLATELIGAANRDTKS 168 HSP 2 Score: 21.9422 bits (45), Expect = 1.384e-28 Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 2 Query: 467 AYAIQKKDEIDRMAKANR 520 ++AI +KD +R+AKA R Sbjct: 168 SFAINRKDAKERVAKAAR 185
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_METVS (30S ribosomal protein S7P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps7p PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.990e-28 Identity = 65/134 (48.51%), Postives = 91/134 (67.91%), Query Frame = 1 Query: 52 VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAAK 453 +PHTAGR S K F K + +VERL N LM N GKK + I++ A+ I+ T +NPIQV+VDA+ NSGPRE+ TRI G+ Q+VD+SP RR++ A I+ GA + A ++ ++IA+CLADEL+ A+K Sbjct: 38 IPHTAGRNSKKMFDKNKMHVVERLANKLMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELVAASK 171
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_METBU (30S ribosomal protein S7P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps7p PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.990e-28 Identity = 61/133 (45.86%), Postives = 97/133 (72.93%), Query Frame = 1 Query: 52 VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAA 450 VPHT+G+++ ++F K+ IVERL N++M + +N GKK +A+RIV A +I++ T +NP+QV+V+AV N+GPRE+ R+ G+ +AVD +P RRV+ A+ I+ G+ ++AF++ R+ AECLA ELI A+ Sbjct: 31 VPHTSGKHARQQFNKSDITIVERLVNNVMRNAQNTGKKQIALRIVDEAFDIVNSKTKKNPVQVLVEAVSNAGPREEVVRLKYGGISVPKAVDTAPQRRVDHALRNISIGSNQTAFKSKRSAAECLASELIAAS 163
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_KORCO (30S ribosomal protein S7P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps7p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.789e-28 Identity = 74/151 (49.01%), Postives = 94/151 (62.25%), Query Frame = 1 Query: 49 YVPHTAGRYSVKRFRKAQCPIVERLTNSLM------------MHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAAKGSSN 465 Y+PHT GR+ K+F K + PIVERL N LM ++ +N GKKL A+R VK+A EII L T +NPIQV +DA+ NS RE+ TRI GV AVD SP R V+ AI I GA AFR+ R++AE LA+E+I AA+ N Sbjct: 39 YLPHTGGRHEHKKFGKLEIPIVERLVNRLMGQAMNSGSRKDHVNSKNQGKKLKAMRTVKYAFEIIELRTGKNPIQVFLDAIENSIIREEVTRIMYGGVSYFHAVDTSPSRMVDLAIRHIAQGAAMKAFRSPRSLAEALAEEIIAAAEYDRN 189
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_HALSA (30S ribosomal protein S7P OS=Halobacterium salinarium GN=rps7p PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 7.561e-28 Identity = 64/135 (47.41%), Postives = 90/135 (66.67%), Query Frame = 1 Query: 46 TYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAA 450 T V HT GR++ K+F+K++ IVERL N LM G N GKK A++IV+ A +I+H TD+NPIQV+V AV N+ PRE+ R+ G+ QAVD +P RRV+QA+ + GA ++F+ AE LA++L AA Sbjct: 53 TPVAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGGISVPQAVDTAPQRRVDQALKFLADGAHSASFKTPTDAAEALANQLAGAA 187
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_HALMA (30S ribosomal protein S7P OS=Haloarcula marismortui GN=rps7p PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.684e-27 Identity = 63/135 (46.67%), Postives = 87/135 (64.44%), Query Frame = 1 Query: 46 TYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAA 450 T + HT GR++ K+F+K++ IVERL N LM N GKK +A IV A E++H TD+NPIQV+V AV NS PRE+ R+ G+ +AVD++P RRV+QA+ + G +F+ T AE LA +LI AA Sbjct: 49 TPIAHTMGRHADKQFKKSEISIVERLINRLMQTDENTGKKQLATSIVTEAFELVHERTDENPIQVLVSAVENSAPREETVRLKYGGISVPKAVDVAPQRRVDQALKFLAEGVYGGSFKTTTTAAEALAQQLIGAA 183
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_METHJ (30S ribosomal protein S7P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps7p PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.200e-27 Identity = 63/135 (46.67%), Postives = 88/135 (65.19%), Query Frame = 1 Query: 52 VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAAKG 456 VPH+ GR + + F KA IVERL N LM N GKK +A+RIV+ A EI+H T +NPI+V+ DAV N+GPRE+ R+ G+ ++VD +P+RRVN A+ LI G ++ + + +A LA+ELI AA G Sbjct: 39 VPHSCGRLTRQEFHKANMLIVERLINQLMRTEVNTGKKQLAIRIVRDAFEIVHQKTKKNPIEVLCDAVANAGPREETVRLKYGGINVPKSVDTAPMRRVNTAVGLIAAGVYSASHKKKKPVANALAEELIAAANG 173
BLAST of EY679347 vs. ExPASy Swiss-Prot
Match: RS7_CENSY (30S ribosomal protein S7P OS=Cenarchaeum symbiosum GN=rps7p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.426e-26 Identity = 69/148 (46.62%), Postives = 95/148 (64.19%), Query Frame = 1 Query: 52 VPHTAGRYSVKRFRKAQCPIVERLTNSLMMH---------GRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIRTIAECLADELINAAKGSSNS 468 +P+T GR ++KRF KA IVERL N MMH GR GKK+ ++ VK A EII+L T +NP++V+V AV NS P ED TRI G V +VD+SPLRRV+ A+ I G +E+AFR +++ E LA+ LI AA ++++ Sbjct: 36 LPYTYGRSALKRFNKADANIVERLANK-MMHFGKKYAKNTGRMAGKKMGSINTVKTAFEIINLKTGRNPVEVLVRAVENSAPNEDTTRIVYGGTVYHVSVDVSPLRRVDLALRFIADGVKEAAFRKPKSLEEFLAEHLILAANNTTDA 182 The following BLAST results are available for this feature:
BLAST of EY679347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679347 ID=EY679347; Name=EY679347; organism=Citrus sinensis; type=EST; length=974bpback to top |