EY744596

Overview
NameEY744596
Unique NameEY744596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1016
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744596 vs. ExPASy Swiss-Prot
Match: CHSB_IPOCO (Chalcone synthase B (Fragment) OS=Ipomoea cordatotriloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.187e-27
Identity = 59/108 (54.63%), Postives = 76/108 (70.37%), Query Frame = 2
Query:   14 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEE 337
            ++D  +  H+RE+GLTFH  K VP  I++N+E  L +AF P GISDWNSIFW+ HPGG AI+D V            A+R VLS YGN++SACVLFILDE+RKKS ++
Sbjct:  255 NTDSHLKLHVREMGLTFHCSKAVPTFITQNVEDCLVKAFEPYGISDWNSIFWVLHPGGNAIVDGVEETLGLAPEKLRASRDVLSGYGNLTSACVLFILDEVRKKSKKD 362          
BLAST of EY744596 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTR (Chalcone synthase B (Fragment) OS=Ipomoea triloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.362e-26
Identity = 57/105 (54.29%), Postives = 75/105 (71.43%), Query Frame = 2
Query:   14 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKS 328
            ++D  +   LRE+GLTFH  + VP ++++N+E  L +AF P GISDWNSIFW+ HPGG AI+D+V            A+R VLSEYGN++SACVLFILDE+R KS
Sbjct:  257 NTDSHLKLTLREMGLTFHCSRAVPSVLAENVEDCLVKAFEPYGISDWNSIFWVFHPGGNAIVDRVEERLGLGAQRFRASRDVLSEYGNLTSACVLFILDEVRNKS 361          
BLAST of EY744596 vs. ExPASy Swiss-Prot
Match: CHS4_TRISU (Chalcone synthase 4 (Fragment) OS=Trifolium subterraneum GN=CHS4 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.782e-26
Identity = 53/63 (84.13%), Postives = 60/63 (95.24%), Query Frame = 2
Query:   14 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILD 202
            DS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF P+GISD+NSIFWIAHPGGPAILD
Sbjct:  249 DSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLGISDYNSIFWIAHPGGPAILD 311          
BLAST of EY744596 vs. ExPASy Swiss-Prot
Match: CHSC_IPOPU (Chalcone synthase C (Fragment) OS=Ipomoea purpurea GN=CHSC PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.367e-24
Identity = 56/96 (58.33%), Postives = 66/96 (68.75%), Query Frame = 2
Query:   14 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLF 301
            D+D  +   LRE+GLTFH  K VP LI++NIE  L +AF P GISDWNSIFWI HPGG AILD V            A+R VLS+YGN++SACVLF
Sbjct:  255 DTDSYLKLQLREMGLTFHCSKAVPSLITQNIEDCLVKAFEPFGISDWNSIFWILHPGGNAILDGVEEKLGLEPEKLRASRDVLSQYGNLTSACVLF 350          
BLAST of EY744596 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.322e-22
Identity = 53/93 (56.99%), Postives = 64/93 (68.82%), Query Frame = 2
Query:   14 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSAC 292
            D+D  +  HLRE+GLTFH  K VP LI++N+E  L +AF P GISDWNSIFWI HPGG AILD+V            A+R VLSE GN++SAC
Sbjct:  252 DTDSHLKLHLREMGLTFHCSKAVPSLITQNVEDYLVKAFEPFGISDWNSIFWILHPGGIAILDRVEEKLGLEPEKLRASRDVLSESGNLTSAC 344          
The following BLAST results are available for this feature:
BLAST of EY744596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSB_IPOCO5.187e-2754.63Chalcone synthase B (Fragment) OS=Ipomoea cordatot... [more]
CHSB_IPOTR3.362e-2654.29Chalcone synthase B (Fragment) OS=Ipomoea triloba ... [more]
CHS4_TRISU9.782e-2684.13Chalcone synthase 4 (Fragment) OS=Trifolium subter... [more]
CHSC_IPOPU5.367e-2458.33Chalcone synthase C (Fragment) OS=Ipomoea purpurea... [more]
CHSA_IPONI1.322e-2256.99Chalcone synthase A (Fragment) OS=Ipomoea nil GN=C... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-002-D03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744596 ID=EY744596; Name=EY744596; organism=Citrus sinensis; type=EST; length=1016bp
CCACGCGTCCGCTGACTCTGACGGTGCAATTGACGGACACTTGCGCGAAG
TCGGTCTCACTTTCCATTTGCTTAAAGACGTCCCCGGCTTGATCTCAAAG
AATATAGAGAAAAGCCTGTCGGAAGCGTTCGCCCCGGTTGGCATCAGCGA
CTGGAACTCGATATTCTGGATCGCTCACCCCGGTGGGCCCGCAATTCTGG
ACCAAGTGGAGTCTAAACTCGGCCTCAAAGAGGAGAAGCTGAAGGCCACA
CGTCAAGTGTTGAGTGAGTACGGTAACATGTCAAGCGCTTGTGTCCTGTT
CATCCTTGACGAGATGAGAAAGAAGTCTGCTGAGGAAGCGAAAGCCACCA
CCGGCGAAGGGCTAGATTGGGGTGTGCTGTTCGGGTTCGGGCCGGGGCTC
ACCGTCGAGACCGTTGTGCTGCACAGTGTCCCCATCAAAGCTTGAAGTGA
GAACTCCATCAGTATGTTTAGTAGTTCAGTAACTTTATGTTGTATGCTTT
CACTCTTGAATTATTGGTTGATCGTGTGAAGGTTTAGTTTTGTCAATTGA
ATTTAAGGCATCCGTACCTTTTCTCTTCGGCAAAAGGAAACTGGGCGGAG
TACCAACCCTGGAGAACCAACGGGGAGGGGGGGGCGGCTCAAAAGGATCC
AGCCTTTACGTAACCCCTGGCAGGAAACCTCAAACCTCTTCAAAAGGGTC
CCCTAAATTTCATTTCCTGGGCCGTCGTTTTTAAAATGCCGGGGACGGGA
AAAACCCTGGGGCTTCCCCCACTTAATCCGCCTTTGCCACCCAACCCCCC
CCTTTTCCCCCACCTGGGGGTAAAAAAACCAAAAAGGGCCCCCCACCGAT
TCCCCCCTTTCCCCACAATTTTGGCACCCCCCTAAAAAGGGAAAAGAGGG
AAACCCCCCCCCGTGAAAGGGGGGCCTTTAAAACCGCGGGGGGGGGGGGG
GGGGGGTGGTTATGCCCCCCCCCCGCGGTAGACCCCGCCTTCTCATACTT
GTTGCCCCGCCCCCCC
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