EY664158
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX16_DICDI (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.376e-23 Identity = 57/167 (34.13%), Postives = 93/167 (55.69%), Query Frame = 3 Query: 42 FASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN*N 542 F P GDHLTL+NV+ ++ + +WC +NFI RS++ A+D+ Q+ +E++ + S +D R+C+A+ FF N+A + G +R Q VQIHPSS LF++ P+ +V++EL+ T +++R I I WL E+AP Y ++ N Sbjct: 938 FFHPQGDHLTLMNVF--------------NQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLVSNVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLFQSPPKWVVYHELVLTTKEFMRQIVEIQSSWLHEIAPHIYKEKDVN 1090
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: PRP16_HUMAN (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo sapiens GN=DHX38 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 2.347e-23 Identity = 56/179 (31.28%), Postives = 97/179 (54.19%), Query Frame = 3 Query: 3 RGELEEARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRA--KPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQ 533 +G EE+ FA P+ DHLT +NVY + K WC D+FI+++++R R++ +Q++ + Q ++SCG D + R+C+ A++F AA + G Y + G +HP+S LF P+ IV++EL+ T +Y++ +T +D WL EL P +Y+++ Sbjct: 988 KGREEESDQIREKFAVPESDHLTYLNVYL--------------QWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVK 1152
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: PRP16_BOVIN (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos taurus GN=DHX38 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.828e-23 Identity = 55/179 (30.73%), Postives = 97/179 (54.19%), Query Frame = 3 Query: 3 RGELEEARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRA--KPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQ 533 +G EE+ FA P+ DHL+ +NVY + K WC D+FI+++++R R++ +Q++ + Q ++SCG D + R+C+ A++F AA + G Y + G +HP+S LF P+ IV++EL+ T +Y++ +T +D WL EL P +Y+++ Sbjct: 988 KGREEESDQIREKFAVPESDHLSYLNVYL--------------QWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVK 1152
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: PRP22_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 OS=Schizosaccharomyces pombe GN=prp22 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.165e-22 Identity = 55/181 (30.39%), Postives = 94/181 (51.93%), Query Frame = 3 Query: 3 RGELEEARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQP-EGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN*N 542 R + +EA FA+P+ DHLTL+NVY + K + WC +++I +R +R A D+ Q+ +++ + SCG + R L + +F N A + EG Y+ + V +HPS VLF E ++++ELIQT+ +Y+ ++ ++ WL E+AP ++ N N Sbjct: 968 REKQQEADRQRAQFANPESDHLTLLNVY--------------TTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRYRHPVVSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANAN 1134
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX15_PONAB (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Pongo abelii GN=DHX15 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.521e-22 Identity = 66/176 (37.50%), Postives = 90/176 (51.14%), Query Frame = 3 Query: 21 ARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCG----EDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN 536 A A FA DGDHLTL+NVY A K+ E + +WC DNFIN RSL A ++ Q+ +++ S + I R+ L +F+ A + G Y + QVVQ+HPS+VL KPE +++NE + T YIR T I WL ++APQYY M N Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAF------------KQNHESV--QWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDH-KPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX15_MOUSE (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Mus musculus GN=Dhx15 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.521e-22 Identity = 66/176 (37.50%), Postives = 90/176 (51.14%), Query Frame = 3 Query: 21 ARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCG----EDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN 536 A A FA DGDHLTL+NVY A K+ E + +WC DNFIN RSL A ++ Q+ +++ S + I R+ L +F+ A + G Y + QVVQ+HPS+VL KPE +++NE + T YIR T I WL ++APQYY M N Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAF------------KQNHESV--QWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDH-KPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX15_HUMAN (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Homo sapiens GN=DHX15 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.521e-22 Identity = 66/176 (37.50%), Postives = 90/176 (51.14%), Query Frame = 3 Query: 21 ARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCG----EDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN 536 A A FA DGDHLTL+NVY A K+ E + +WC DNFIN RSL A ++ Q+ +++ S + I R+ L +F+ A + G Y + QVVQ+HPS+VL KPE +++NE + T YIR T I WL ++APQYY M N Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAF------------KQNHESV--QWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDH-KPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: MOG1_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 OS=Caenorhabditis elegans GN=mog-1 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 3.389e-22 Identity = 54/179 (30.17%), Postives = 99/179 (55.31%), Query Frame = 3 Query: 3 RGELEEARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRA--KPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQ 533 +G EEA F P+ DHLT +NVY + +T K KWC DN+++ ++L+ R++ +Q++ ++ + + S G + + R+C+ +++F NAA + G Y + G +HP+S LF P+ +V++ELI T +Y++ +T +D +WL EL P +Y+++ Sbjct: 898 KGREEEADAKKEKFQVPESDHLTFLNVY--------------IQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIK 1062
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX35_HUMAN (Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 3.389e-22 Identity = 56/162 (34.57%), Postives = 89/162 (54.94%), Query Frame = 3 Query: 42 FASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAK-PECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYY 524 FA +GDHLT++N+Y A F++ K KWC+++F+N + L A + Q++ + + S D + RC+ + FF NAA G YR + + IHP+SVL+ K P +++NE+IQT+ Y+R++T I+ WL ELAP +Y Sbjct: 538 FAVEEGDHLTMLNIYEA---FIKHNKDS-----------KWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 685
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: PRP43_YEAST (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 OS=Saccharomyces cerevisiae GN=PRP43 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.288e-21 Identity = 62/179 (34.64%), Postives = 95/179 (53.07%), Query Frame = 3 Query: 15 EEARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMF----RRCLAASFFLNAALKQPEGT-YRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN 536 + A +A FA PDGDH+TL+NVY A S E E + KWC+D+++N RSL A +I SQ+ + + +++ + + R+ LA+ FF+ A K+ Y + Q V IHPS+VL E +++NE + T+ YIR +T + WL E+AP YY + N Sbjct: 563 KRADDAKNIFAHPDGDHITLLNVYHAFK----------SDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQDVLIHPSTVLGH-DAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSN 730 The following BLAST results are available for this feature:
BLAST of EY664158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >EY664158 ID=EY664158; Name=EY664158; organism=Citrus sinensis; type=EST; length=933bpback to top |