EY664158
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX35_PONAB (Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.682e-21 Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = 3 Query: 42 FASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKP-ECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYY 524 FA +GDHLT++NVY A F++ K +WC+++F+N + L A + Q++ + + S D RC+ + FF NAA G YR + + IHP+SVL+ KP +++NE+IQT+ Y+R++T I+ WL ELAP +Y Sbjct: 538 FAVEEGDHLTMLNVYEA---FIKHNKNS-----------QWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 685
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: PRH1_SCHPO (Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces pombe GN=prh1 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.869e-21 Identity = 58/173 (33.53%), Postives = 91/173 (52.60%), Query Frame = 3 Query: 15 EEARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSC----GEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQY 521 +EA A F +GD LT +N R ++LE + ++WC NFIN R+L+ DI Q+R H + G+ ++S E++++ + + N AL P+G+YR + G Q + IHPSS LF K E I+++EL+ T Y+R ++ I WL +AP Y Sbjct: 556 DEAIEARLKFLHSEGDLLTCLNALR---QYLES---------SHDSRKQWCSQNFINRRALKTILDIRKQLREHCLKDGWELNSSPEVNSENLLL---SFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSLFGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHY 713
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX16_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 OS=Caenorhabditis elegans GN=mog-4 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 3.747e-21 Identity = 52/174 (29.89%), Postives = 91/174 (52.30%), Query Frame = 3 Query: 3 RGELEEARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYY 524 + ++ A +A F SP GDH+TL+NVY +K + ++WC +N++ R+++ ARD+ Q+ G +E++ S D I R+ + A +F N + G Y+ + HP+S LF P +V+ EL+ T+ +++R ++ I+ WL E+AP YY Sbjct: 824 KAQVIHADSARKGFWSPAGDHITLMNVY--------------NKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKS-STDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYY 982
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX15_CAEEL (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.747e-21 Identity = 60/177 (33.90%), Postives = 91/177 (51.41%), Query Frame = 3 Query: 18 EARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCG----EDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN 536 EA A FA DGDHLTL+NVY + + E + WC DNFIN R+++ A + +Q+ +++ R S + + R+ L A FF+ A + G Y + Q+V +HPS+VL KPE ++NE + T +IR +T + WL ++APQYY + N Sbjct: 553 EADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQ--------------WCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVLDH-KPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDN 714
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: CDC28_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28 OS=Schizosaccharomyces pombe GN=cdc28 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 3.172e-20 Identity = 55/180 (30.56%), Postives = 95/180 (52.78%), Query Frame = 3 Query: 3 RGELEEARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFR-ISSCGEDMIMFRRCLAASFFLNAALKQPEG-TYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN 536 + ++ EA A +F P GDHLTL++++ +E+++ W ++NF+ +SL ARD+ Q+ E++ +++ E + ++ + A +F NAA G +YR + Q V IHPSS + KP+ I++ EL+ T +Y R IT I WL E++P Y+ +N Sbjct: 877 KDKIMEADKARANFTQPGGDHLTLLHIW---NEWVDT-----------DFSYNWARENFLQYKSLCRARDVRDQLANLCERVEIELVTNSSESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSVAEKKPKVIIYFELVLTTKEYCRQITEIQPEWLLEISPHYFKPEN 1042
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX15_SCHPO (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43 OS=Schizosaccharomyces pombe GN=prp43 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.143e-20 Identity = 60/170 (35.29%), Postives = 86/170 (50.59%), Query Frame = 3 Query: 42 FASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGED----MIMFRRCLAASFFLNAALKQPEG-TYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN 536 F PDGDHLTL+NVY A K+ + WC ++F++ R+L A ++ Q+R +E+ + S D + RR L + FF+ A K G Y + QVV +HPS L PE +V+NE + T +IRN+T I WL ELAP YY + + Sbjct: 554 FTHPDGDHLTLLNVYHAY--------------KSGEGTADWCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQVVSLHPSCGL-SVTPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDD 708
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX15_DICDI (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15 OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.229e-20 Identity = 58/177 (32.77%), Postives = 91/177 (51.41%), Query Frame = 3 Query: 18 EARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMF----RRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN 536 EA +A SF DGDHLT++NVY + + E WC DNF+N R+++ A + SQ+ + + + S + + ++C+AA FF+ A + + Y L Q V HPS+ L R +PE ++NE + T+ YIR IT + + WL ELAP Y+ ++ Sbjct: 536 EADSAKKSFDHFDGDHLTMLNVYHSFKKNGEDPT--------------WCYDNFLNHRAIKQADSVRSQLARILTRFKLPLVSGDVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSVIFHPSTGLTR-RPEFCIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKS 697
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX15_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.580e-19 Identity = 56/178 (31.46%), Postives = 88/178 (49.44%), Query Frame = 3 Query: 21 ARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDM------IMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN 536 A A F DGDHLTL+NVY A K+ E WC +NF+N+R+++ A ++ Q+ + + F + C D + R+ + A +F+ A + G Y + QVV +HPS+ L KPE +++NE + T +IR +T I WL ++A YY + N Sbjct: 541 ADEAKARFGHIDGDHLTLLNVYHAY------------KQNNED--PNWCFENFVNNRAMKSADNVRQQLVRIMSR--FNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDH-KPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSN 701
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: PRP16_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 OS=Schizosaccharomyces pombe GN=prp16 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 8.939e-15 Identity = 48/175 (27.43%), Postives = 86/175 (49.14%), Query Frame = 3 Query: 15 EEARNAMTSFASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQIRGHVEQMGFRISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHPSSVLFRAK--PECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQ 533 EE+ A F P+ DHL L+N+Y+ + WC +F++S++L+ ARDI Q+ + + + S D + RR L +++F AA + G Y L G +H +S L+ P+ ++++EL+ T+ +Y+ +T +D WL E YY+++ Sbjct: 952 EESDAAREKFNVPESDHLMLLNIYQ--------------HWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMSKQKISLESVS-DWDIVRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLYGLGYLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSVK 1111
BLAST of EY664158 vs. ExPASy Swiss-Prot
Match: DHX35_CAEEL (Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis elegans GN=Y67D2.6 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.525e-14 Identity = 54/169 (31.95%), Postives = 91/169 (53.85%), Query Frame = 3 Query: 42 FASPDGDHLTLINVYRASDEFLEKRKMEISKEKTEKILRKWCKDNFINSRSLRHARDIHSQI-----RGHVEQMGFR-ISSCGEDMIMFRRCLAASFFLNAALKQPEGTYRALAGGQVVQIHP-SSVLFRAK-PECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYY 524 FA +GDH+T++NV+ +F+E + +KWC D+F+N R L A ++ SQ+ R +E++ R + +C E++ R+CL FF AA G Y + ++ SS++F+ P+ ++F E++Q + IR++T I+ WL ELAP YY Sbjct: 557 FAVEEGDHMTMLNVFT---KFVENGRS-----------KKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSENI---RQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVMQDS---IRDVTVIEPEWLYELAPHYY 705 The following BLAST results are available for this feature:
BLAST of EY664158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >EY664158 ID=EY664158; Name=EY664158; organism=Citrus sinensis; type=EST; length=933bpback to top |