EY664080 | Citrus Genome Database

Overview


Name	EY664080
Unique Name	EY664080
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	905

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: CH60_BACCQ (60 kDa chaperonin OS=Bacillus cereus (strain Q1) GN=groL PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.285e-44
Identity = 83/139 (59.71%), Postives = 108/139 (77.70%), Query Frame = 2

Query:  263 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVK 679
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A V ELK +SK ++
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIE 138

HSP 2 Score: 38.891 bits (89), Expect = 1.285e-44
Identity = 22/42 (52.38%), Postives = 25/42 (59.52%), Query Frame = 3

Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            +IAEAM +VG  G   L + K     L  VEGMQFDRGY  P
Sbjct:  159 LIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASP 200

BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: CH60_BACCE (60 kDa chaperonin OS=Bacillus cereus GN=groL PE=1 SV=3)

HSP 1 Score: 162.54 bits (410), Expect = 1.285e-44
Identity = 82/139 (58.99%), Postives = 108/139 (77.70%), Query Frame = 2

Query:  263 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVK 679
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A + ELK +SK ++
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVTAAIEELKTISKPIE 138

HSP 2 Score: 38.891 bits (89), Expect = 1.285e-44
Identity = 22/42 (52.38%), Postives = 25/42 (59.52%), Query Frame = 3

Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            +IAEAM +VG  G   L + K     L  VEGMQFDRGY  P
Sbjct:  159 LIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASP 200

BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: CH60_BACC7 (60 kDa chaperonin OS=Bacillus cereus (strain AH187) GN=groL PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.285e-44
Identity = 83/139 (59.71%), Postives = 108/139 (77.70%), Query Frame = 2

Query:  263 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVK 679
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A V ELK +SK ++
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIE 138

HSP 2 Score: 38.891 bits (89), Expect = 1.285e-44
Identity = 22/42 (52.38%), Postives = 25/42 (59.52%), Query Frame = 3

Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            +IAEAM +VG  G   L + K     L  VEGMQFDRGY  P
Sbjct:  159 LIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASP 200

BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: CH60_BACC4 (60 kDa chaperonin OS=Bacillus cereus (strain B4264) GN=groL PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.285e-44
Identity = 82/139 (58.99%), Postives = 108/139 (77.70%), Query Frame = 2

Query:  263 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVK 679
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A + ELK +SK ++
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVTAAIEELKTISKPIE 138

HSP 2 Score: 38.891 bits (89), Expect = 1.285e-44
Identity = 22/42 (52.38%), Postives = 25/42 (59.52%), Query Frame = 3

Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            +IAEAM +VG  G   L + K     L  VEGMQFDRGY  P
Sbjct:  159 LIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASP 200

BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: CH60_BACC3 (60 kDa chaperonin OS=Bacillus cereus (strain 03BB102) GN=groL PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.285e-44
Identity = 83/139 (59.71%), Postives = 108/139 (77.70%), Query Frame = 2

Query:  263 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVK 679
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A V ELK +SK ++
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIE 138

HSP 2 Score: 38.891 bits (89), Expect = 1.285e-44
Identity = 22/42 (52.38%), Postives = 25/42 (59.52%), Query Frame = 3

Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            +IAEAM +VG  G   L + K     L  VEGMQFDRGY  P
Sbjct:  159 LIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASP 200

BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: CH60_BACC2 (60 kDa chaperonin OS=Bacillus cereus (strain G9842) GN=groL PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.285e-44
Identity = 82/139 (58.99%), Postives = 108/139 (77.70%), Query Frame = 2

Query:  263 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVK 679
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A + ELK +SK ++
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVTAAIEELKTISKPIE 138

HSP 2 Score: 38.891 bits (89), Expect = 1.285e-44
Identity = 22/42 (52.38%), Postives = 25/42 (59.52%), Query Frame = 3

Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            +IAEAM +VG  G   L + K     L  VEGMQFDRGY  P
Sbjct:  159 LIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASP 200

BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: CH60_BACC1 (60 kDa chaperonin OS=Bacillus cereus (strain ATCC 10987) GN=groL PE=3 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.285e-44
Identity = 83/139 (59.71%), Postives = 108/139 (77.70%), Query Frame = 2

Query:  263 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVK 679
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A V ELK +SK ++
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIE 138

HSP 2 Score: 38.891 bits (89), Expect = 1.285e-44
Identity = 22/42 (52.38%), Postives = 25/42 (59.52%), Query Frame = 3

Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            +IAEAM +VG  G   L + K     L  VEGMQFDRGY  P
Sbjct:  159 LIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASP 200

BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: CH60_BACC0 (60 kDa chaperonin OS=Bacillus cereus (strain AH820) GN=groL PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.285e-44
Identity = 83/139 (59.71%), Postives = 108/139 (77.70%), Query Frame = 2

Query:  263 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVK 679
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A V ELK +SK ++
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIE 138

HSP 2 Score: 38.891 bits (89), Expect = 1.285e-44
Identity = 22/42 (52.38%), Postives = 25/42 (59.52%), Query Frame = 3

Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            +IAEAM +VG  G   L + K     L  VEGMQFDRGY  P
Sbjct:  159 LIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASP 200

BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: CH60_BACAN (60 kDa chaperonin OS=Bacillus anthracis GN=groL PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.285e-44
Identity = 83/139 (59.71%), Postives = 108/139 (77.70%), Query Frame = 2

Query:  263 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVK 679
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A V ELK +SK ++
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIE 138

HSP 2 Score: 38.891 bits (89), Expect = 1.285e-44
Identity = 22/42 (52.38%), Postives = 25/42 (59.52%), Query Frame = 3

Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            +IAEAM +VG  G   L + K     L  VEGMQFDRGY  P
Sbjct:  159 LIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASP 200

BLAST of EY664080 vs. ExPASy Swiss-Prot
Match: CH60_BACAH (60 kDa chaperonin OS=Bacillus thuringiensis (strain Al Hakam) GN=groL PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.285e-44
Identity = 83/139 (59.71%), Postives = 108/139 (77.70%), Query Frame = 2

Query:  263 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVK 679
            AKD+ F+++  A + +  GV+ LA+ V VTLGPKGRNVVLE K+G+P I NDGVT+AKE+ELED  EN+GAKLV + A+KTND+AGDGTTT+ VLAQ +I EG+K V AGANP+ + +GIEK   A V ELK +SK ++
Sbjct:    2 AKDIKFSEE--ARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIE 138

HSP 2 Score: 38.891 bits (89), Expect = 1.285e-44
Identity = 22/42 (52.38%), Postives = 25/42 (59.52%), Query Frame = 3

Query:  738 MIAEAMSKVGRKGCGDLWKRKKC*DMLYXVEGMQFDRGYILP 863
            +IAEAM +VG  G   L + K     L  VEGMQFDRGY  P
Sbjct:  159 LIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASP 200

The following BLAST results are available for this feature:

BLAST of EY664080 vs. ExPASy Swiss-Prot

BLAST of EY664080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
CH60_BACCQ	1.285e-44	59.71	60 kDa chaperonin OS=Bacillus cereus (strain Q1) G...	[more]
CH60_BACCE	1.285e-44	58.99	60 kDa chaperonin OS=Bacillus cereus GN=groL PE=1 ...	[more]
CH60_BACC7	1.285e-44	59.71	60 kDa chaperonin OS=Bacillus cereus (strain AH187...	[more]
CH60_BACC4	1.285e-44	58.99	60 kDa chaperonin OS=Bacillus cereus (strain B4264...	[more]
CH60_BACC3	1.285e-44	59.71	60 kDa chaperonin OS=Bacillus cereus (strain 03BB1...	[more]
CH60_BACC2	1.285e-44	58.99	60 kDa chaperonin OS=Bacillus cereus (strain G9842...	[more]
CH60_BACC1	1.285e-44	59.71	60 kDa chaperonin OS=Bacillus cereus (strain ATCC ...	[more]
CH60_BACC0	1.285e-44	59.71	60 kDa chaperonin OS=Bacillus cereus (strain AH820...	[more]
CH60_BACAN	1.285e-44	59.71	60 kDa chaperonin OS=Bacillus anthracis GN=groL PE...	[more]
CH60_BACAH	1.285e-44	59.71	60 kDa chaperonin OS=Bacillus thuringiensis (strai...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-062-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY664080 ID=EY664080; Name=EY664080; organism=Citrus sinensis; type=EST; length=905bp
TTCGTCGACCCACGCGTCCGCTCTTTAAATCCTAAAACTCTCGCACTTTC
CGCCGTCTCACAGTTTAAACGAATAAATGGCGTCGACTTTCACTGCCATG
TCTTCCATTAGCTCCATGATTGCTCCTAATGGACGAATGACTGATAAGAA
GCTTGCATCTTCTTCGAACAAATTGTCATCACTTGCTTCCATTTCTTCAA
GTTCATTCGGCAGGAGACAGAGTGTAGCTCTACGCAGGGCCCGCACACCT
AAGATTTATGCGGCAAAGGACTTGCATTTCAACAAGGATGGATATGCCAT
GAAGAAACTTCAAAATGGTGTCAACAAGCTTGCAGATCTAGTTGGAGTTA
CCCTTGGTCCCAAGGGCAGGAATGTTGTTCTAGAGAGCAAGTACGGTGCC
CCAAAAATTGTGAATGATGGTGTAACTGTGGCCAAAGAAGTTGAGTTAGA
GGACCCGGTTGAGAACATTGGTGCTAAATTAGTGAGACAAGCAGCTGCCA
AGACTAATGACTTGGCTGGTGATGGAACAACAACATCTGTTGTTCTTGCG
CAAGGGCTTATAGCTGAAGGTGTTAAGGTCGTGGCAGCTGGTGCAAATCC
TGTTCTTATCACAAGAGGCATTGAGAAGACATCTAAGGCTCTTGTTTCTG
AGCTCAAGCAGATGTCAAAAGAGGTGAAGATAGTGAACTTGCCGATGTAG
CAGCTGTTAGTGCAGGGAACAACTATGAAAGTGGGATATGATTGCAGAAG
CCATGAGTAAAGTGGGACGTAAGGGTTGTGGTGACCTTTGGAAGAGGAAA
AAGTGCTGAGATATGCTCTATGNTGTTGAGGGAATGCAATTTGATCGGGG
NTATATTCTCCCTACTTCNCACTGATAGGGAGAAATGGGCAGTGATATTG
AAACT