EY663899

Overview
NameEY663899
Unique NameEY663899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length947
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY663899 vs. ExPASy Swiss-Prot
Match: GDC_HUMAN (Graves disease carrier protein OS=Homo sapiens GN=SLC25A16 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 5.032e-13
Identity = 56/175 (32.00%), Postives = 80/175 (45.71%), Query Frame = 3
Query:   45 FLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYK--GISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKT-LKSDGIAGLYRG 557
            +L  FL GG++   +KT  AP++RVK+L+Q  +         H YK  G+        + EG L L++GN A +IR FP  A+ F   +++K L   K    G+  +  AG+               Y LD  R RLA   K     GE  + G+I  +K    K  G  G YRG
Sbjct:   36 WLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHN---------HHYKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGISGHVHRLMAGSMAGMTAVIC-----TYPLDMVRVRLAFQVK-----GEHSYTGIIHAFKTIYAKEGGFFGFYRG 191          
BLAST of EY663899 vs. ExPASy Swiss-Prot
Match: GDC_BOVIN (Graves disease carrier protein OS=Bos taurus GN=SLC25A16 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.572e-13
Identity = 56/175 (32.00%), Postives = 80/175 (45.71%), Query Frame = 3
Query:   45 FLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYK--GISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKT-LKSDGIAGLYRG 557
            +L  FL GG++   +KT  AP++RVK+L+Q  +         H Y+  G+        K EG L L++GN A +IR FP  A+ F   +++K L   K    G+  +  AG+               Y LD  R RLA   K     GE  + G+I  +K    K  G  G YRG
Sbjct:   34 WLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHN---------HHYRHLGVFSTLRAVPKKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGVSGHVHRLMAGSMAGMTAVIC-----TYPLDMVRVRLAFQVK-----GEHTYTGIIHAFKTIYAKEGGFLGFYRG 189          
BLAST of EY663899 vs. ExPASy Swiss-Prot
Match: MCFR_DICDI (Mitochondrial substrate carrier family protein R OS=Dictyostelium discoideum GN=mcfR PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.497e-12
Identity = 45/139 (32.37%), Postives = 67/139 (48.20%), Query Frame = 3
Query:   33 TLSSFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLA 449
            T +S +V  L GGVS  ++K+  AP+ERVK+L Q + +M       + +  +       +K+EG+  LW+GNTA ++R FP  A+ +   DY K   NF  D+    + F                  Y LD  R RLA
Sbjct:    7 TKTSPMVTLLAGGVSGVIAKSTIAPLERVKILYQVKSKM-------YSFNSVYGLMKNIIKNEGLAGLWKGNTATILRIFPYSAIQWTSYDYLKN--NFVTDKKSSVQIFIAG----SLGFSCAILLTYPLDVIRARLA 132          
BLAST of EY663899 vs. ExPASy Swiss-Prot
Match: GDC_MOUSE (Graves disease carrier protein homolog OS=Mus musculus GN=Slc25a16 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.497e-12
Identity = 53/173 (30.64%), Postives = 79/173 (45.66%), Query Frame = 3
Query:   45 FLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGY-WKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKT-LKSDGIAGLYRG 557
            +L  FL GG++   +KT  AP++RVK+L+Q  +   K       + G+        + EG L L++GN A +IR FP  A+ F   +++K     K    G+  +  AG+               Y LD  R RLA   K     GE  ++G+I  +K    K  G  G YRG
Sbjct:   36 WLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHNRHYK-------HLGVLSTLRAVPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFITTKLGVSGHVHRLMAGSMAGMTAVIC-----TYPLDVVRVRLAFQVK-----GEHTYSGIIHAFKTIYAKEGGFLGFYRG 191          
BLAST of EY663899 vs. ExPASy Swiss-Prot
Match: SCM2A_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.262e-12
Identity = 51/169 (30.18%), Postives = 82/169 (48.52%), Query Frame = 3
Query:   66 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCF----GRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGF 560
            GG + AVS+T  AP++R+K+L+Q            H  +G S C      + +K+ G+ SLWRGN  NVI+  P  AL F   +  KR+    ++  G  + F                 +Y ++  +TRL     A +K G  Q+ G+ D  K  LK++G++  Y+G+
Sbjct:  193 GGGAGAVSRTCTAPLDRLKVLMQ-----------VHGCQGKSMCLMSGLTQMIKEGGVRSLWRGNGINVIKIAPETALKFMAYEQIKRVMGSSQETLGISERFVAGSLAGVIAQST----IYPMEVLKTRL-----ALRKTG--QYKGISDCAKHILKTEGMSAFYKGY 339          
BLAST of EY663899 vs. ExPASy Swiss-Prot
Match: MCFB_DICDI (Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.260e-12
Identity = 51/176 (28.98%), Postives = 76/176 (43.18%), Query Frame = 3
Query:   60 LMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR---DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCGG 578
            L GGV+ AVS+T  +P+ER+K+L Q     ++     +  +GI          EG +  ++GN  NVIR  P  A+ F   + +K       D+     Y   F G                Y LD  R+RL       K      +NG+ D  K  ++ +G+AGLY+G   S  G
Sbjct:  143 LSGGVAGAVSRTCTSPLERLKILNQVGHMNLEQNAPKYKGRGIIQSLKTMYTTEGFIGFFKGNGTNVIRIAPYSAIQFLSYEKYKNFLLNNNDQTHLTTYENLFVGGAAGVTSLLC-----TYPLDLIRSRLTVQVFGNK------YNGIADTCKMIIREEGVAGLYKGLFASALG 307          
BLAST of EY663899 vs. ExPASy Swiss-Prot
Match: SCM2B_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-B OS=Danio rerio GN=slc25a25b PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 7.266e-12
Identity = 46/165 (27.88%), Postives = 77/165 (46.67%), Query Frame = 3
Query:   66 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGF 560
            GG + AVS+T  AP++R+K+L+Q       S        GI+  F + +++ G+ SLWRGN  NV++  P  A+ F   +  KRL    ++  G  +                   +Y ++  +TRLA        G   Q++G+ D  K   K +G+   Y+G+
Sbjct:  193 GGGAGAVSRTCTAPLDRLKVLMQVHATRSNS-------MGIAGGFTQMIREGGLRSLWRGNGINVLKIAPESAIKFMAYEQIKRLIGSNQETLGILERLVSGSLAGAIAQSS----IYPMEVLKTRLA-------LGRTGQYSGIADCAKHIFKKEGMTAFYKGY 339          
BLAST of EY663899 vs. ExPASy Swiss-Prot
Match: SCMC2_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.490e-12
Identity = 48/165 (29.09%), Postives = 81/165 (49.09%), Query Frame = 3
Query:   66 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGF 560
            GG + AVS+T  AP++R+K+L+Q      +S  +S     I   F   +++ G  SLWRGN  NVI+  P  A+ F   +  KR+    ++  G  + F                 +Y ++  +TR+     A +K G  Q+ G++D  KK L  +G++  Y+G+
Sbjct:  238 GGGAGAVSRTCTAPLDRLKVLMQVHAS--RSNNMS-----ILGGFTHMIREGGFRSLWRGNGINVIKIAPESAIKFMAYEQIKRIIGSNQETLGIHERFVAGSLAGVIAQSS----IYPMEVLKTRM-----ALRKTG--QYQGVLDCGKKILLQEGLSAFYKGY 384          
BLAST of EY663899 vs. ExPASy Swiss-Prot
Match: SCMC2_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus tropicalis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.239e-11
Identity = 49/166 (29.52%), Postives = 86/166 (51.81%), Query Frame = 3
Query:   66 GGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDG-YWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGF 560
            GG + AVS+T  AP++R+K+L+Q      +S  +S     +   F + +++ GI SLWRGN  NVI+  P  A+ F   +  KR+    ++  G + +  AG+              +Y ++  +TR+     A +K G  Q+ G++D  KK L  +G++  Y+G+
Sbjct:  237 GGGAGAVSRTCTAPLDRLKVLMQVHAS--RSNNMS-----MLGGFTQMIREGGIRSLWRGNGINVIKIAPESAIKFMAYEQMKRIIGSDQETLGIHERLVAGSLAGVIAQSS-----IYPMEVLKTRM-----ALRKTG--QYQGMLDCGKKILLKEGVSAFYKGY 383          
BLAST of EY663899 vs. ExPASy Swiss-Prot
Match: MCFP_DICDI (Mitochondrial substrate carrier family protein P OS=Dictyostelium discoideum GN=mcfP PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.239e-11
Identity = 53/170 (31.18%), Postives = 81/170 (47.65%), Query Frame = 3
Query:   51 VDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWF-AGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRG 557
            V FL GG++   +K+A AP+ERVK+L Q + E+       +    +     + V++EGI  LWRGN+A ++R FP  A+ F   +  K   +   D+   ++ F AG+               Y LD  R RLA   +  KK  +        + K T   DG+ G+YRG
Sbjct:   16 VSFLSGGLAGVTAKSAVAPLERVKILYQIKSEL-------YSLNSVYGSMLKIVENEGIKGLWRGNSATILRVFPYAAVQFLSYETIKN--HLVADKSSSFQIFLAGSAAGGIAVCA-----TYPLDLLRARLA--IEIHKKPTKPH-----HLLKSTFTKDGVKGIYRG 164          
The following BLAST results are available for this feature:
BLAST of EY663899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
GDC_HUMAN5.032e-1332.00Graves disease carrier protein OS=Homo sapiens GN=... [more]
GDC_BOVIN6.572e-1332.00Graves disease carrier protein OS=Bos taurus GN=SL... [more]
MCFR_DICDI2.497e-1232.37Mitochondrial substrate carrier family protein R O... [more]
GDC_MOUSE2.497e-1230.64Graves disease carrier protein homolog OS=Mus musc... [more]
SCM2A_DANRE3.262e-1230.18Calcium-binding mitochondrial carrier protein SCaM... [more]
MCFB_DICDI4.260e-1228.98Mitochondrial substrate carrier family protein B O... [more]
SCM2B_DANRE7.266e-1227.88Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC2_XENLA9.490e-1229.09Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC2_XENTR1.239e-1129.52Calcium-binding mitochondrial carrier protein SCaM... [more]
MCFP_DICDI1.239e-1131.18Mitochondrial substrate carrier family protein P O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-060-F01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663899 ID=EY663899; Name=EY663899; organism=Citrus sinensis; type=EST; length=947bp
TTCCTGACCCACGCGTCCGCTCCATCAGATTAACCCTTTCTTCTTTTTTG
GTGGATTTTCTCATGGGAGGAGTTTCAGCAGCTGTTTCCAAGACTGCAGC
TGCTCCTATTGAGCGGGTTAAGCTTTTGATTCAGAATCAAGATGAGATGA
TCAAGAGTGGTCGGCTCTCGCATCCGTACAAGGGGATTTCTGATTGCTTT
GGTAGAACTGTTAAGGATGAAGGCATACTATCTCTTTGGAGAGGCAACAC
TGCCAATGTTATCAGATACTTCCCTACCCAGGCCCTGAACTTTGCATTCA
AGGATTACTTTAAGAGGCTGTTTAACTTCAAGAAAGACAGAGATGGCTAC
TGGAAGTGGTTTGCTGGGAACTTGGCATCTGGTGGGGCTGCTGGTGCTTC
ATCGCTTCTTTTTGTGTATTCGCTTGACTATGCAAGAACACGTTTGGCAA
ATGATGCTAAGGCAGCTAAAAAGGGTGGGGAAAGGCAGTTTAATGGGTTG
ATTGATGTCTACAAGAAGACTCTGAAATCTGATGGCATTGCTGGGCTCTA
CCGTGGATTCAGCATCTCATGTGGTGGGAATTATAACGTATCGGGGGCTC
TACTTTGGAATGAACGATTCTCTAAAACTGGCGGGGTGACTGAAGGGATG
GCAGATAATTTCTGGGCTAGCCTTCTACCTGGCCGGGGGAACACCATGGG
CGCCTGGTTGGGCTTCCTTACCCAATTATACGGGGGGCTAACAGGATGAT
GATGACCCCCGGAAAAGCGGGGAAGACAAAAACCCCTTGCACGGCTTCCC
GGGAAATTATAAGAAAGGGGGCCCAATACCCTCTCCAAGGGGGCTGGGGC
AACCTTTCTGCGCGCTCGGAAGGTGCTGTGGTTCTTCCCGGTCTAAAAAG
TGACCTTGCGTTCTTTGGCAAAAAAACCGGTCCGGGGGGGGGGGTAA
back to top