EY663898

Overview
NameEY663898
Unique NameEY663898
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY663898 vs. ExPASy Swiss-Prot
Match: KCS15_ARATH (3-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana GN=KCS15 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.290e-30
Identity = 70/190 (36.84%), Postives = 111/190 (58.42%), Query Frame = 1 
Query:   22 GEDSYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNIALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPG 591
            GE+SY PR VV       +L +   E   +IF  +D+L A T I+   I +LV+N  + +  PSL++ +IN Y LR++ +++NL GMGCSA V+A+DL + L   ++   A+VVSTE +   WY G + +++  N  FR G  +++L++    + +A  +L  LVRTH G  D +Y+     ED+ G  G
Sbjct:  137 GEESYMPR-VVFKPGHRVNLRDGREEAAMVIFGAIDELLAATKINVKHIKILVLNCGVLNTTPSLSAMVINHYKLRHNTESYNLGGMGCSAGVIAIDLAKDLLNAHQGSYALVVSTEIVSFTWYSGNDVALLPPNCFFRMGAAAVMLSSRRIDRWRAKYQLMQLVRTHKGMEDTSYKSIELREDRDGKQG 325
The following BLAST results are available for this feature:
BLAST of EY663898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS15_ARATH7.290e-3036.843-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-060-E12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663898 ID=EY663898; Name=EY663898; organism=Citrus sinensis; type=EST; length=906bp
TCCGTCGACCCACGCGTCCGCGGAGAGGATTCCTACGGCCCAAGAAACGT
CGTTGAAGGCAGAGAAGAGTCACCTTCTTTAGCTGAGGCATTTTCAGAAA
TGGATGAAATCATTTTTGACACACTTGACAAGCTCTTTGCAAGAACAGAT
ATTTCTCCATCTGAAATTGACGTTCTTGTCGTGAATGTGTCGCTATTTTC
TCCTGCTCCTTCTCTTACATCTCGAATTATAAATCGCTACAACCTGAGGA
ACGATATTAAGGCCTTCAATTTATCCGGAATGGGCTGCAGTGCAAGCGTG
GTAGCCGTTGATCTTGTGCAGCAGCTCTTCAGAACCTACAAAAACAAGCT
TGCAATTGTTGTGAGCACAGAGTCCATGGGACCTAACTGGTACTGCGGCA
GAGAAAAATCTATGATGCTTTCGAATATTTTGTTCCGCTCAGGTGGGTGC
TCAATGCTTTTGACGAACAACATAGCGTTAAAGCACAAAGCAATCTTGAA
GTTGAACTGTTTAGTGAGAACCCATTTTGGCTCAAACGATGAAGCTTATG
AATGCTGTATGCAAGTTGAAGATCAACAAGGGCACCCCGGCTTTCGCCTC
ACGAAACAGCTAACAAAAGCTGCAGCTCTGGCTTTCACAATGAATCTCCA
GGTTCTTGTTCCGAAAATATTGCCTCTCAGAGAGCAATTTCGGTATGTAA
TCCAATCCTATTATGAAAACAGAATCAGAAAAAGCACTTCTAGTACTAAA
CCTGAAGCAGTACTCGGAGCAGGGGTGAACCTTGAAGCTGGAATTGAGCA
TTTCTGCTTAATCCCTGGAGAAAAGCTGTGATTGATGGGACTGGAAAGGC
TTGGAATTGGATGATACGATCTTGAGCCAGCAGGATGGGGCCTCATCGAT
TCGGAA
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