EY744470

Overview
NameEY744470
Unique NameEY744470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1035
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_SULTO (Signal recognition 54 kDa protein OS=Sulfolobus tokodaii GN=srp54 PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 9.405e-24
Identity = 62/143 (43.36%), Postives = 81/143 (56.64%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K A +++KKG+K  LV AD +R  A+DQL Q   +  +P YG    +D V IA  GVE F  E  D+IIVDT+GRH   +E  L EEM+ +     PD VI V+D+SIG            +   G++IVTK DG   GG AL
Sbjct:  114 KLALFYKKKGYKVGLVAADVYRPAAYDQLVQIGKQINVPVYGEPNNTDAVGIAKRGVEKFLSEKYDIIIVDTAGRHGYGEEVKLLEEMKNMYSEIKPDEVILVIDASIGQKAYDLASRFHQASPIGSIIVTKMDGTAKGGGAL 256          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METS5 (Signal recognition 54 kDa protein OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=srp54 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.604e-23
Identity = 59/143 (41.26%), Postives = 84/143 (58.74%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K AY+++K+G+K ALV AD +R  A +QL+Q   +  +P YG     D V IA  GVE F  E  +L+IVDT+GRH   +E  L EEM+ + E   P+ VI V+D+S+G            + + G++I+TK DG   GG AL
Sbjct:  115 KLAYFYKKRGYKVALVGADVYRPAALEQLQQIGKQINVPVYGEPGSQDAVGIAKRGVEKFLSERYELVIVDTAGRHGYGEEVKLLEEMKDIYEKIKPNEVILVIDASLGQKAYDLAKRFHEASNVGSIIITKMDGTAKGGGAL 257          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_SULAC (Signal recognition 54 kDa protein OS=Sulfolobus acidocaldarius GN=srp54 PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 2.095e-23
Identity = 58/143 (40.56%), Postives = 86/143 (60.14%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRH--KQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K A +++KKG+K  LV AD +R  A++QL Q   +  IP YG     +P+ IA  G+E F KE  +++I+DT+GRH   +EA+L EEM+ + +  +PD VI V+D+SIG            +   G++IV+K DG   GG AL
Sbjct:  114 KLALFYKKKGYKVGLVAADIYRPAAYEQLIQIGQQINIPVYGEPGNKNPIEIATNGLEKFLKEKMNIVIIDTAGRHGYGEEASLLEEMKSMYDKIHPDEVILVIDASIGQKAYDLASRFHQASPIGSLIVSKMDGTAKGGGAL 256          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_HALLT (Signal recognition 54 kDa protein OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=srp54 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.736e-23
Identity = 58/144 (40.28%), Postives = 82/144 (56.94%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            S  K A++  KKG +PA++  DTFR GA+DQ KQ   +A++ FYG     DPV IA EG+E     + D+ IVDT+GRH  E  L  E+ ++  A +PD  + V+D++IG            S+    V++TK DG   GG AL
Sbjct:  113 SAAKMAWWFSKKGLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDNDDPVAIAREGLEA--TADADVHIVDTAGRHALEDDLIAEIEEIERAVDPDRSLLVLDAAIGQGAKEQARQFEKSIGIEGVMITKLDGTAKGGGAL 254          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_PYRCJ (Signal recognition 54 kDa protein OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=srp54 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.574e-23
Identity = 59/144 (40.97%), Postives = 82/144 (56.94%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +  K A Y  K+G+K  LV  DT R  AFDQLKQ A K  +PFYG     + V IAV GV+ FK  N D++I+DT+GRH+ E  L +E++ + +A  PD V  V+D+++G             +   +VI+TK D    GG AL
Sbjct:  114 TAAKLAKYLAKRGYKVGLVETDTIRPAAFDQLKQLAEKIGVPFYGERDGKNAVEIAVRGVQNFK--NMDVVIIDTAGRHRNEEELLKEVKAIYDAVKPDEVFLVIDATVGKLAAAQAEAFMKYLPIHSVIITKMDSTARGGGAL 255          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_AERPE (Signal recognition 54 kDa protein OS=Aeropyrum pernix GN=srp54 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.668e-23
Identity = 60/143 (41.96%), Postives = 83/143 (58.04%), Query Frame = 2
Query:   17 KYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHK--QEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            K AYY+ ++G+K  LV +DT R GA++QLK+ A +A   FYG   E DP  IA  G+E       +++IVDT+GRH   +EA L +EM+ ++    PD V  V+D+SIG            S   G++IVTK DG   GG AL
Sbjct:  115 KLAYYYVRRGYKVGLVSSDTHRPGAYEQLKRLAEEAGAMFYGE-REGDPAEIARRGLEDLLSRGAEIVIVDTAGRHGHGEEARLLDEMKAIASKVRPDEVALVIDASIGQKAMGLAERFHKSTPIGSIIVTKMDGTARGGGAL 256          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_NATPD (Signal recognition 54 kDa protein OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=srp54 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 6.096e-23
Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +  K A++  KKG +PA++  DTFR GA+DQ K+   +A++ FYG+    DPV IA  G+E  +  + D+ IVDT+GRH  E AL +E+  +  A +PD  + V+D++IG            +V    V +TK DG   GG AL
Sbjct:  113 TAAKMAWWFSKKGLRPAVIQTDTFRPGAYDQAKEMCERAEVDFYGNPDSDDPVEIAERGLE--ETADADVHIVDTAGRHALEEALIDELEAIESAVDPDRNLLVLDAAIGQGAKDQAERFHDAVGIDGVAITKLDGTAKGGGAL 254          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_THENV (Signal recognition 54 kDa protein OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=srp54 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.317e-22
Identity = 59/144 (40.97%), Postives = 82/144 (56.94%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            +  K A    K+G+K  LV  DT R  AFDQL+Q A K  +PFYG     D V IA  GV+  K  N D++IVDT+GRH+ E AL +E++ + EA +PD V+ V+D+++G             +   +VI+TK D    GG AL
Sbjct:  115 TAAKLAKLLVKRGYKVGLVETDTVRPAAFDQLRQLAEKIGVPFYGERDGKDAVEIARRGVQNLK--NLDVVIVDTAGRHRNEEALLQEVKAIYEAVSPDEVVLVIDATVGKLAAAQAEAFMRYLPIHSVIITKMDSTARGGGAL 256          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_HALWD (Signal recognition 54 kDa protein OS=Haloquadratum walsbyi (strain DSM 16790) GN=srp54 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.317e-22
Identity = 56/144 (38.89%), Postives = 81/144 (56.25%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            S  K A++   KG +PA++  DTFR GA+DQ +Q   +A++ FYG     DPV+IA EG+E     + D+ IVDT+GRH  EA L +E+  +     PD  + V+D++IG            ++    V+VTK DG   GG AL
Sbjct:  113 SAAKMAWWFSTKGLRPAVIQTDTFRPGAYDQAEQMCERAEVSFYGDPDCDDPVKIAREGIEA--TADADIHIVDTAGRHALEADLIDEIEAIDSTVAPDRSLLVLDAAIGQGAKQQAREFNNAIGIDGVVVTKLDGTAKGGGAL 254          
BLAST of EY744470 vs. ExPASy Swiss-Prot
Match: SRP54_METMA (Signal recognition 54 kDa protein OS=Methanosarcina mazei GN=srp54 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 5.161e-22
Identity = 60/144 (41.67%), Postives = 76/144 (52.78%), Query Frame = 2
Query:    8 SGTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAVEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATNPDLVIFVMDSSIGXXXXXXXXXXXXSVSAGAVIVTKTDGNGWGGEAL 439
            S  K A Y Q+KG K  +V ADTFR GA+ QLK  + K  + FYG     D V I + G++  +K   D+ IVDT+GRH  EA L EEM ++     PD    V+D+ IG            SV    VI+TK DG   GG AL
Sbjct:  113 SAAKLARYFQRKGLKAGVVAADTFRPGAYHQLKTLSEKLNVGFYGEEGNPDAVEITIHGLKALEKY--DIKIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVGITGVIITKLDGTAKGGGAL 254          
The following BLAST results are available for this feature:
BLAST of EY744470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
SRP54_SULTO9.405e-2443.36Signal recognition 54 kDa protein OS=Sulfolobus to... [more]
SRP54_METS51.604e-2341.26Signal recognition 54 kDa protein OS=Metallosphaer... [more]
SRP54_SULAC2.095e-2340.56Signal recognition 54 kDa protein OS=Sulfolobus ac... [more]
SRP54_HALLT2.736e-2340.28Signal recognition 54 kDa protein OS=Halorubrum la... [more]
SRP54_PYRCJ3.574e-2340.97Signal recognition 54 kDa protein OS=Pyrobaculum c... [more]
SRP54_AERPE4.668e-2341.96Signal recognition 54 kDa protein OS=Aeropyrum per... [more]
SRP54_NATPD6.096e-2338.89Signal recognition 54 kDa protein OS=Natronomonas ... [more]
SRP54_THENV2.317e-2240.97Signal recognition 54 kDa protein OS=Thermoproteus... [more]
SRP54_HALWD2.317e-2238.89Signal recognition 54 kDa protein OS=Haloquadratum... [more]
SRP54_METMA5.161e-2241.67Signal recognition 54 kDa protein OS=Methanosarcin... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-H12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744470 ID=EY744470; Name=EY744470; organism=Citrus sinensis; type=EST; length=1035bp
CCACGCGTCCGGTACAAAATATGCTTATTATCATCAAAAGAAAGGTTGGA
AACCGGCTTTAGTCTGTGCTGATACATTCAGAGCTGGTGCTTTTGATCAG
TTGAAGCAGAATGCCACCAAAGCTAAGATTCCATTTTATGGAAGCTACAC
AGAGTCTGATCCTGTGAGAATTGCAGTGGAAGGTGTGGAAACATTTAAAA
AGGAAAACTGTGATCTCATAATTGTTGATACCAGTGGTCGCCATAAACAG
GAAGCTGCTCTTTTTGAAGAGATGCGTCAAGTTTCTGAAGCAACGAATCC
AGATCTTGTTATATTTGTTATGGATAGCAGTATTGGTCAAGCCGCATTTG
ATCAAGCTCAAGCATTCAAGCAAAGTGTTTCTGCTGGAGCTGTGATTGTT
ACTAAAACGGATGGCAATGGGTGGGGTGGGGAAGCTCTTCGCGCCCACGC
CGCCCCCGCGCACTCCCCAGACCACCCCCAGCCGAGCGCAGACGTCTCAG
GGCCTGGTGCTCGCGCCGGCCAAAGGCCCCCCACCGATCACCTAAGCACG
AGAAGCTCGTCAAAGCGCTCCTCACAAAACAAAGGCCCCCACCCGAACCA
CGCCCCACACCCGCCGGGCCGCAACGGCGTACACTGCTCCCCACCAACCC
ACGGTCGGTCGTAACCCACGAAGACAGAACACCACAAAGACCACGGACAG
GCGACCGCAGCGACCGAAACCCTCGGTCCGCACGCGCCCGGCGCGCGACC
GCGCGCGCGCCGCGCACCCCCCAGCGGGCCTGCAGACCGACAGCGCCCAC
ACAGACGCGGCGGCGCGCACCGCAGCACGACAGCGCAAGGCGCCACACCC
CAGCTGAGCCGCCGCCGCCCGCAGGACGGGCCGCCCAACGCCTCGCGCCC
CTCCCCCCCGTCACGACACCTCCGCGGCGCCACCGATCCACCCTGCACCC
GCGGCCACGAGCCCCCGCCGCCCACCTCGGTGCAGCCGCTCGCCCCCGCC
CANCGACCCCCACCCCGGCTGCCGCCGCTGTGCCC
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