EY663296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: HMGB1_RAT (High mobility group protein B1 OS=Rattus norvegicus GN=Hmgb1 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12 Identity = 36/76 (47.37%), Postives = 46/76 (60.53%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 449 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 165
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: HMGB1_PAPAN (High mobility group protein B1 OS=Papio anubis GN=HMGB1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12 Identity = 36/76 (47.37%), Postives = 46/76 (60.53%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 449 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 165
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: HMGB1_MOUSE (High mobility group protein B1 OS=Mus musculus GN=Hmgb1 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12 Identity = 36/76 (47.37%), Postives = 46/76 (60.53%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 449 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 165
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: HMGB1_MACFA (High mobility group protein B1 OS=Macaca fascicularis GN=HMGB1 PE=2 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12 Identity = 36/76 (47.37%), Postives = 46/76 (60.53%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 449 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 165
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: HMGB1_HUMAN (High mobility group protein B1 OS=Homo sapiens GN=HMGB1 PE=1 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12 Identity = 36/76 (47.37%), Postives = 46/76 (60.53%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 449 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 165
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: HMGB1_HORSE (High mobility group protein B1 OS=Equus caballus GN=HMGB1 PE=2 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12 Identity = 36/76 (47.37%), Postives = 46/76 (60.53%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 449 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 165
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: HMGB1_CRIGR (High mobility group protein B1 (Fragment) OS=Cricetulus griseus GN=HMGB1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12 Identity = 36/76 (47.37%), Postives = 46/76 (60.53%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 449 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + Sbjct: 56 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 130
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: HMGB1_CANFA (High mobility group protein B1 OS=Canis familiaris GN=HMGB1 PE=2 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12 Identity = 36/76 (47.37%), Postives = 46/76 (60.53%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 449 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 165
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: HMGB1_CALMO (High mobility group protein B1 OS=Callicebus moloch GN=HMGB1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12 Identity = 36/76 (47.37%), Postives = 46/76 (60.53%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 449 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 165
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: HMGB1_CALJA (High mobility group protein B1 OS=Callithrix jacchus GN=HMGB1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12 Identity = 36/76 (47.37%), Postives = 46/76 (60.53%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 449 DPN PKRP SAFF+F E+R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 165 The following BLAST results are available for this feature:
BLAST of EY663296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >EY663296 ID=EY663296; Name=EY663296; organism=Citrus sinensis; type=EST; length=843bpback to top |