EY663296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: SSRP1_MOUSE (FACT complex subunit SSRP1 OS=Mus musculus GN=Ssrp1 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.759e-11 Identity = 35/82 (42.68%), Postives = 48/82 (58.54%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEGTK 467 DPN PKRP SA+ +++ RE+ K DHP S+ + K GE WK MS+ K + KAE + EYEK MK Y + + +K Sbjct: 543 DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARREYEKAMKEYEGGRGDSSK 623
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: SSRP1_HUMAN (FACT complex subunit SSRP1 OS=Homo sapiens GN=SSRP1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.759e-11 Identity = 35/82 (42.68%), Postives = 48/82 (58.54%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEGTK 467 DPN PKRP SA+ +++ RE+ K DHP S+ + K GE WK MS+ K + KAE + +YEK MK Y + E +K Sbjct: 543 DPNAPKRPMSAYMLWLNASREKIKSDHP-GISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYEGGRGESSK 623
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: HMG3M_HUMAN (Putative high mobility group protein B3-like protein OS=Homo sapiens PE=5 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.000e-11 Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNY-NRRQAEGTK 467 DPN PKRP S FF+F EF + K +P + V K GE WK++++++K PY+ +A K K +YEKD+ Y ++ +++G K Sbjct: 88 DPNAPKRPPSGFFLFCSEFCPKSKSTNP-GIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAK 169
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: SSRP1_CHICK (FACT complex subunit SSRP1 OS=Gallus gallus GN=SSRP1 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.918e-11 Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYN 443 DPN PKRP SA+ +++ RE+ K DHP S+ + K GE WK+MS+ K + KAE K +YEK MK Y+ Sbjct: 541 DPNAPKRPMSAYMLWLNANREKIKSDHP-GISITDLSKKAGELWKAMSKEKKEEWDRKAEDAKRDYEKAMKEYS 613
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: HMG3L_HUMAN (High mobility group protein B3-like-1 OS=Homo sapiens GN=HMGB3L1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.918e-11 Identity = 36/83 (43.37%), Postives = 53/83 (63.86%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNY-NRRQAEGTK 467 DPN PKRP S FF+F EF + K +P S+ V K GE W ++++++K PYV K K K +YEKD+ +Y ++ + +GTK Sbjct: 25 DPNAPKRPLSGFFLFCSEFCPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYVTKVAKLK-KYEKDVADYKSKGKLDGTK 105
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: NHP6_GIBZE (Non-histone chromosomal protein 6 OS=Gibberella zeae GN=NHP6 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.682e-11 Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAE 458 DPN PKR SA+ F E RE ++++P S VGK GE+WK+++E +APY AKA K YE + + YN Q E Sbjct: 20 DPNAPKRGLSAYMFFANEQRENVREENP-GISFGQVGKLLGERWKALNEKQRAPYEAKAAADKKRYEDEKQAYNADQEE 97
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: HMGLX_HUMAN (High mobility group protein 1-like 10 OS=Homo sapiens GN=HMG1L10 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.728e-11 Identity = 34/76 (44.74%), Postives = 44/76 (57.89%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 449 DPN PKR SAFF+F +R + K +HP S+ V K GE W + + DK PY KA K K +YEKD+ Y + Sbjct: 91 DPNAPKRTPSAFFLFCSAYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 165
BLAST of EY663296 vs. ExPASy Swiss-Prot
Match: HGB1A_HUMAN (Putative high mobility group protein B1-like 1 OS=Homo sapiens GN=HMGB1L1 PE=5 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.728e-11 Identity = 37/80 (46.25%), Postives = 47/80 (58.75%), Query Frame = 3 Query: 222 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEG 461 DPN PKRP SAFF+F E+ + K +HP S+ V K GE W + + DK P KA K K +YEKD+ Y QA+G Sbjct: 91 DPNAPKRPPSAFFLFCSEYHPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAY---QAKG 166 The following BLAST results are available for this feature:
BLAST of EY663296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY663296 ID=EY663296; Name=EY663296; organism=Citrus sinensis; type=EST; length=843bpback to top |