EY744419

Overview
NameEY744419
Unique NameEY744419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length962
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744419 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.921e-21
Identity = 34/85 (40.00%), Postives = 51/85 (60.00%), Query Frame = 2
Query:  305 GWTDAPDGEYAWGYCYITQVSPASSHYGHPYWPCPLPGLYYGRGPIQLAWKCDYLVGGEALWVDLLNKPDLLATDPVLSSRSSIW 559
            G T +PDG YA GYC++ + +   + Y             YGRGPIQL  + +Y + G+A+  DL+N PDL+ATD  +S +++IW
Sbjct:   94 GGTLSPDGPYAGGYCFLREGNQMGNGY-------------YGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIW 165          

HSP 2 Score: 45.8246 bits (107), Expect = 2.921e-21
Identity = 19/35 (54.29%), Postives = 26/35 (74.29%), Query Frame = 1
Query:  175 LGKIVSREMFEHLLPDTNDARCAATGFYTYDAFFA 279
            +G IV+ ++F+ +L + NDARC A  FYTYDAF A
Sbjct:   26 VGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIA 60          

HSP 3 Score: 29.6462 bits (65), Expect = 2.921e-21
Identity = 10/20 (50.00%), Postives = 12/20 (60.00%), Query Frame = 3
Query:  561 YWMTAHPHKPSCHQVSIDSW 620
            +WMT   +KPSCH V    W
Sbjct:  166 FWMTPQGNKPSCHDVITGRW 185          
BLAST of EY744419 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.903e-21
Identity = 32/85 (37.65%), Postives = 49/85 (57.65%), Query Frame = 2
Query:  305 GWTDAPDGEYAWGYCYITQVSPASSHYGHPYWPCPLPGLYYGRGPIQLAWKCDYLVGGEALWVDLLNKPDLLATDPVLSSRSSIW 559
            G T     ++ WGYC+  +++ A+S              YYGRGPIQL  + +Y   G AL +DL+  PDL++TD V+S +++IW
Sbjct:  101 GGTRGSSDQFQWGYCFKEEINKATSPP------------YYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIW 173          

HSP 2 Score: 43.5134 bits (101), Expect = 4.903e-21
Identity = 16/44 (36.36%), Postives = 30/44 (68.18%), Query Frame = 1
Query:  175 LGKIVSREMFEHLLPDTNDARCAATGFYTYDAFFAQSGHETTWG 306
            +G ++++ +F  +LP+ ++++C A GFYTYDAF A +     +G
Sbjct:   32 VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFG 75          

HSP 3 Score: 32.7278 bits (73), Expect = 4.903e-21
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 3
Query:  561 YWMTAHPHKPSCHQVSIDSW 620
            +WMTA  +KPSCH V +  W
Sbjct:  174 FWMTAQGNKPSCHDVILGRW 193          
BLAST of EY744419 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.356e-21
Identity = 47/98 (47.96%), Postives = 59/98 (60.20%), Query Frame = 2
Query:  272 FLPNLAMKLLGGWTDAPDGEYAWGYCYITQVSPASSHYGHP--YWPCPLPGLYYGRGPIQLAWKCDYLVGGEALWVDLLNKPDLLATDPVLSSRSSIW 559
            FL   + +  GGW  APDG +AWGYC+  Q   ASS Y  P   WPC     YYGRGPIQL+   +Y   G A+ VDLL  PDL+ATD  +  +++IW
Sbjct:   83 FLAQTSHETTGGWATAPDGAFAWGYCF-KQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIW 179          

HSP 2 Score: 30.0314 bits (66), Expect = 5.356e-21
Identity = 11/20 (55.00%), Postives = 12/20 (60.00%), Query Frame = 3
Query:  561 YWMTAHPHKPSCHQVSIDSW 620
            +WMTA P KPS H V    W
Sbjct:  180 FWMTAQPPKPSSHAVIAGQW 199          
BLAST of EY744419 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 6.924e-21
Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = 2
Query:  326 GEYAWGYCYITQVSPASSHYGHPY--WPCPLPGLYYGRGPIQLAWKCDYLVGGEALWVDLLNKPDLLATDPVLSSRSSIWLLDDCPSPQAILPPSLY*LMENPSP 634
            G Y+WGYCY  +V  A+S +  P   WPC     Y+ RGP+Q+A+  +Y   GEA+  DLL  P+L+ATDP ++ ++++WL     SP    P ++      P+P
Sbjct:  166 GPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTP 269          

HSP 2 Score: 42.743 bits (99), Expect = 6.924e-21
Identity = 20/43 (46.51%), Postives = 26/43 (60.47%), Query Frame = 1
Query:  166 GGELG--KIVSREMFEHLLPDTNDARCAATGFYTYDAFFAQSG 288
            GG  G   +V+ + FE +LP  +DA C A GFY Y AF A +G
Sbjct:   92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAG 134          
BLAST of EY744419 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 6.924e-21
Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = 2
Query:  326 GEYAWGYCYITQVSPASSHYGHPY--WPCPLPGLYYGRGPIQLAWKCDYLVGGEALWVDLLNKPDLLATDPVLSSRSSIWLLDDCPSPQAILPPSLY*LMENPSP 634
            G Y+WGYCY  +V  A+S +  P   WPC     Y+ RGP+Q+A+  +Y   GEA+  DLL  P+L+ATDP ++ ++++WL     SP    P ++      P+P
Sbjct:  166 GPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTP 269          

HSP 2 Score: 42.743 bits (99), Expect = 6.924e-21
Identity = 20/43 (46.51%), Postives = 26/43 (60.47%), Query Frame = 1
Query:  166 GGELG--KIVSREMFEHLLPDTNDARCAATGFYTYDAFFAQSG 288
            GG  G   +V+ + FE +LP  +DA C A GFY Y AF A +G
Sbjct:   92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAG 134          
BLAST of EY744419 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 8.251e-21
Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = 2
Query:  326 GEYAWGYCYITQVSPASSHYGHPYWPCPLPGLYYGRGPIQLAWKCDYLVGGEALWV--DLLNKPDLLATDPVLSSRSSIW 559
            G +  GYC++ Q+  +                YYGRGPIQL  + +Y   G+ + V  DL+N PDL+ATDP++S R++IW
Sbjct:   99 GTFTGGYCFVRQIDQSDR--------------YYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIW 164          

HSP 2 Score: 45.0542 bits (105), Expect = 8.251e-21
Identity = 20/34 (58.82%), Postives = 24/34 (70.59%), Query Frame = 1
Query:  178 GKIVSREMFEHLLPDTNDARCAATGFYTYDAFFA 279
            G IV+RE+FE +L   N+  C A GFYTYDAF A
Sbjct:   28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIA 61          

HSP 3 Score: 34.2686 bits (77), Expect = 8.251e-21
Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = 3
Query:  561 YWMTAHPHKPSCHQVSIDSW 620
            +WMTA  +KPSCH V I  W
Sbjct:  165 FWMTAQDNKPSCHNVIIGQW 184          
BLAST of EY744419 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.172e-20
Identity = 43/97 (44.33%), Postives = 62/97 (63.92%), Query Frame = 2
Query:  272 FLPNLAMKLLGGWTDAPDGEYAWGYCYITQVSPASSH-YGHPYWPCPLPGLYYGRGPIQLAWKCDYLVGGEALWVDLLNKPDLLATDPVLSSRSSIW 559
            FL   + +  GGW  APDG ++WGYC+  + +P S +    P WPC     YYGRGPIQL++  +Y   G A+ VDLL+ PDL+ATD  +S ++++W
Sbjct:  147 FLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALW 243          

HSP 2 Score: 25.7942 bits (55), Expect = 1.172e-20
Identity = 9/20 (45.00%), Postives = 11/20 (55.00%), Query Frame = 3
Query:  561 YWMTAHPHKPSCHQVSIDSW 620
            +WMT   +KPS H V    W
Sbjct:  244 FWMTPQGNKPSSHDVITGRW 263          
BLAST of EY744419 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.800e-20
Identity = 31/85 (36.47%), Postives = 50/85 (58.82%), Query Frame = 2
Query:  305 GWTDAPDGEYAWGYCYITQVSPASSHYGHPYWPCPLPGLYYGRGPIQLAWKCDYLVGGEALWVDLLNKPDLLATDPVLSSRSSIW 559
            G + + DG +A GYC++ + +   S +             YGRGPIQL  + +Y + G+A+  DL+N PDL+ATD  +S +++IW
Sbjct:   87 GGSLSADGPFAGGYCFVREGNQMGSGF-------------YGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIW 158          

HSP 2 Score: 46.2098 bits (108), Expect = 1.800e-20
Identity = 19/36 (52.78%), Postives = 26/36 (72.22%), Query Frame = 1
Query:  172 ELGKIVSREMFEHLLPDTNDARCAATGFYTYDAFFA 279
            ++G IV+ ++F  +L + ND RC A GFYTYDAF A
Sbjct:   18 DVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIA 53          

HSP 3 Score: 31.9574 bits (71), Expect = 1.800e-20
Identity = 11/20 (55.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:  561 YWMTAHPHKPSCHQVSIDSW 620
            +WMTA  +KPSCH V    W
Sbjct:  159 FWMTAQGNKPSCHDVITGQW 178          
BLAST of EY744419 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.985e-20
Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 2
Query:  272 FLPNLAMKLLGGWTDAPDGEYAWGYCYITQVSPASSHYGHPY--WPCPLPGLYYGRGPIQLAWKCDYLVGGEALWVDLLNKPDLLATDPVLSSRSSIWLLDDCPSPQ 586
            FL   + +  GGW  APDG Y+WGYC+  + +  +  Y  P   WPC     YYGRGPIQ+ +  +Y   G+A+  DLLN PDL+A+D  +S +++ W      SP+
Sbjct:  134 FLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPK 240          

HSP 2 Score: 28.8758 bits (63), Expect = 1.985e-20
Identity = 10/20 (50.00%), Postives = 11/20 (55.00%), Query Frame = 3
Query:  561 YWMTAHPHKPSCHQVSIDSW 620
            +WMT    KPSCH V    W
Sbjct:  232 FWMTPQSPKPSCHAVITGQW 251          
BLAST of EY744419 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 6.575e-20
Identity = 29/80 (36.25%), Postives = 46/80 (57.50%), Query Frame = 2
Query:  326 GEYAWGYCYITQVSPASSHYGHPYWPCPLPGLYYGRGPIQLAWKCDYLVGGEALWV--DLLNKPDLLATDPVLSSRSSIW 559
            G +  GYC++ Q+  +                YYGRGPIQL  + +Y   G+ + V  +L+N PDL+ATDP++S +++IW
Sbjct:   99 GTFTGGYCFVKQIEQSDR--------------YYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIW 164          

HSP 2 Score: 45.0542 bits (105), Expect = 6.575e-20
Identity = 20/34 (58.82%), Postives = 24/34 (70.59%), Query Frame = 1
Query:  178 GKIVSREMFEHLLPDTNDARCAATGFYTYDAFFA 279
            G IV+RE+FE +L   N+  C A GFYTYDAF A
Sbjct:   28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIA 61          

HSP 3 Score: 33.8834 bits (76), Expect = 6.575e-20
Identity = 18/52 (34.62%), Postives = 25/52 (48.08%), Query Frame = 3
Query:  561 YWMTAHPHKPSCHQVSIDSWKTLLPTEPTCRA----GFLNYSLNQEFDQGGG 704
            +WMT   +KPSCH V I  W T  P +         G +   +N +F+ G G
Sbjct:  165 FWMTEQDNKPSCHNVIIGQW-TPSPKDTAANRVPGYGVITNIINGQFECGMG 215          
The following BLAST results are available for this feature:
BLAST of EY744419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
CHIT_PETHY2.921e-2140.00Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]
CHI8_ORYSJ4.903e-2137.65Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI2_HORVU5.356e-2147.9626 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=... [more]
CHI7_ORYSJ6.924e-2138.10Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSI6.924e-2138.10Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 ... [more]
CHIA_SOLCI8.251e-2138.75Acidic endochitinase pcht28 OS=Solanum chilense PE... [more]
CHI2_ORYSJ1.172e-2044.33Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIB_SOLLC1.800e-2036.47Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHI3_ORYSJ1.985e-2040.19Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIA_SOLLC6.575e-2036.25Acidic 26 kDa endochitinase OS=Solanum lycopersicu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-D08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744419 ID=EY744419; Name=EY744419; organism=Citrus sinensis; type=EST; length=962bp
CCACGCGTCCGGATAATTGATGTCGTACCCCTTGCTTTCAATGTGAGGCT
CATTGGGTCCTTACTAATTCTCTCTCTAGATTTATCTTTTGTACTAAGAG
GTTCAGCACAGAATTGAGGAAGCGGCGTTGTGTGCGGGGAACGTGATACT
GGCCACAGGACGGATGGCGGTGAACTGGGCAAGATCGTCTCACGGGAAAT
GTTTGAACACTTGCTTCCGGATACAAATGATGCCCGATGCGCTGCCACAG
GCTTCTACACTTATGATGCTTTTTTTGCCCAATCTGGCCATGAAACTACT
TGGGGGATGGACCGATGCACCTGATGGAGAATATGCTTGGGGATATTGCT
ATATTACGCAAGTGAGCCCTGCGTCGTCCCACTACGGTCATCCTTACTGG
CCATGTCCCTTGCCAGGGCTATACTATGGCCGAGGTCCCATTCAACTCGC
TTGGAAGTGCGATTACTTAGTGGGCGGAGAAGCCTTGTGGGTGGACTTGT
TGAACAAACCAGACCTACTTGCCACTGATCCTGTACTATCATCTCGGTCA
TCCATCTGGTTACTGGATGACTGCCCATCCCCACAAGCCATCCTGCCACC
AAGTCTCTATTGACTCATGGAAAACCCTTCTCCCAACTGAACCAACCTGC
CGAGCCGGCTTCCTGAATTACAGTCTTAACCAGGAATTTGATCAAGGTGG
GGGATTCCTCTGGGTCGAACTCTGGAGAATGCACCCCACCTCCCACAATG
GGTGGGGCAACTTTCCCCTGTTGGGGCGCCGAGGCCTCGGAACTAGACCC
CGGTGGAATAGCTCCTAGACACTTGGCGGAGACCATAAGATGAGCGCCCG
CTGCACCAAGCCCCTACCAATTCCTCCAGGACAAGACCGCTCCCCCGCGC
CTGCCACTCCCCTTACCCCACCGTCAACAGAACACCCTCCTGCTTCCTCT
ACCACGCACATG
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