EY663278

Overview
NameEY663278
Unique NameEY663278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY663278 vs. ExPASy Swiss-Prot
Match: INDY2_DROME (Protein I'm not dead yet 2 OS=Drosophila melanogaster GN=Indy-2 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.912e-22
Identity = 77/299 (25.75%), Postives = 134/299 (44.82%), Query Frame = 1
Query:   37 LALVIFVALWAILCLFYCPRGSGPALSEYLDKANL------KRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRA-GDGTASVVMATLLFIIPSM--------------KQKGEKLMDWNKC-KKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALALQCLHLVLMFLGRWGCSVAATSET 867
            + LVI   L   + LF     +G  ++E      L      +R +D LGPM+  E  +   F  +I L +TR     +PGW  L N +  G  +    +  L+F +P+                Q  + ++ W    + +PW ++ LLG GFA+A   R +GL   +SKA+  L   P + +  I  +++   + F +N     +VLP+L +++  + +HPL+L +P  +G    + LP  TP N +     HI+ +     G+   I GI+        + L+    WG  +   S++
Sbjct:  260 VTLVIIAFLITHMGLFRPNSKTGKIIAEANTNRKLMEDVLRQRHID-LGPMSCHEIQMAIAFAFMIVLLITRK-PGFVPGWSDLINRKVVGSASGLSFIVLLIFALPTQYTFFKYCCGKGPFTAQAIDAILSWEYVLRNIPWGLLFLLGGGFALAVASRETGLNIMISKAMQVLIGLPNIVVQSITFVLANFFSAFNANVVVANIVLPILCEMSLALELHPLILTLPACLGISMVYFLPVSTPPNAIVTQYAHIKTKYFACCGIVPTIIGIS--------VALVNTNTWGLIIFPESKS 548          
BLAST of EY663278 vs. ExPASy Swiss-Prot
Match: Y672_METJA (Uncharacterized transporter MJ0672 OS=Methanocaldococcus jannaschii GN=MJ0672 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.605e-15
Identity = 62/258 (24.03%), Postives = 122/258 (47.29%), Query Frame = 1
Query:   28 GFPLALVIFVALWAILCLFYCPRGSGPALSEYLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWMTRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMKQKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLS-KALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALAL 798
            GFP++L++F+     L +++          +++ K ++  +  M   ++     +L +F ++ +LW+      +I      FN +  D   ++    LLF+          L++ N  KK+ W  ++L G    +   +  SG    LS K +  L     + +  +V  I+ I+T F SN   T +++P+L  ++  +    L+L V   + A  SF+LP GTP N + ++ G ++ ++M+K G+ L I   A + L
Sbjct:  197 GFPISLLLFLICTLTLYIYF---------KKWIPKEDIAIQARM--ELSRNAYKLLVIFVLIASLWIISDYLSEI------FNVQYFDSVIAIFAIILLFVF--------NLVEVNDFKKIDWGTLILFGGALCLGGVIVKSGANTFLSEKLIAILGNLTPIVLLFLVVTITIILTNFISNTGLTGIIVPILFGVSLGIPKEILILAV--GMSASCSFILPVGTPPNAIVYSEG-VKKEEMMKIGMILSILSAAVITL 426          
BLAST of EY663278 vs. ExPASy Swiss-Prot
Match: Y608_HAEIN (Uncharacterized transporter HI0608 OS=Haemophilus influenzae GN=HI0608 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.504e-14
Identity = 57/260 (21.92%), Postives = 122/260 (46.92%), Query Frame = 1
Query:   25 FGFPLALVIFVALWAILCLFYCPRGSGPALSEYLDKANLKRELDMLGPMAFAEKMVLAVFGMLIALWM-TRSITDDIPGWGALFNDRAGDGTASVVMATLLFIIPSMKQKGEKLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFL-EAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAALA 795
            +G P+ +++   +  IL + + P+        +L+       ++M  PM     +   +F ++   W+ +  I   I G   L  + A   +   ++A ++     +         W + +    W +++L G G  ++  ++ SG +  L+ ++ F+ +   +  I  +V      +TEFTSN A+  L++P+ I IA+++ +  + L +   IGA  +F+LP  TP N + F +G ++  +M+K G  L +  +  +A
Sbjct:  211 YGLPIMIILLPLMIGILYIIFKPK-------LHLNFEQTFENIEM-NPMRI---LTFIIFPVIALTWIFSGKINPFISGLLGLQKNIASFDSIVALLAAIVICSTGVAS-------WKQIQSNTDWGVLMLFGGGLTLSAVLKDSGASKILADSIVFMIDGQHFYLIGLLVAAFIIFLTEFTSNTASAALLVPIFISIAQSLGMPEIGLALIIGIGASCAFMLPVATPPNAIVFGSGQVKQSEMVKVGFLLNLVCVVVIA 452          
The following BLAST results are available for this feature:
BLAST of EY663278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
INDY2_DROME1.912e-2225.75Protein I'm not dead yet 2 OS=Drosophila melanogas... [more]
Y672_METJA8.605e-1524.03Uncharacterized transporter MJ0672 OS=Methanocaldo... [more]
Y608_HAEIN2.504e-1421.92Uncharacterized transporter HI0608 OS=Haemophilus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-053-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663278 ID=EY663278; Name=EY663278; organism=Citrus sinensis; type=EST; length=905bp
TTGCTCGACCCACGCGTCCGCTGTTTTGGTTTCCCTTTGGCTTTAGTGAT
TTTCGTTGCTTTGTGGGCTATTTTGTGCTTGTTCTATTGTCCAAGGGGAT
CTGGACCTGCTCTCTCCGAGTATTTGGACAAAGCAAATCTCAAGAGAGAG
CTTGACATGTTAGGTCCAATGGCTTTTGCTGAAAAGATGGTACTAGCTGT
ATTTGGGATGCTAATAGCATTGTGGATGACAAGATCAATAACAGATGACA
TTCCAGGTTGGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCT
AGTGTTGTGATGGCAACATTGTTGTTCATAATTCCGAGCATGAAGCAAAA
GGGAGAAAAATTGATGGATTGGAACAAATGCAAGAAGCTACCTTGGAACA
TTATATTGCTTTTAGGGGCTGGCTTTGCTATAGCTGATGGAGTCAGGACT
AGCGGTCTTGCTGATGATCTGTCAAAAGCATTGGATTTCCTGGAGGCGGC
GCCATATTTAGCCATTGCACCTATCGTATGTCTGATTAGCGCGATTATTA
CTGAATTCACATCAAATAATGCCACAACAACTCTCGTTCTTCCACTTCTG
ATCCAAATAGCAAAAACTATGCATGTTCATCCATTGCTTCTTATGGTTCC
TGGAGCAATTGGAGCACAATTTTCTTTCTTGTTGCCGACTGGAACCCCTT
CAAATATTGTTGGATTCACCACCGGGCACATCGAAATTCAAGATATGATC
AAGACAGGGCTGCCCCTTAAGATTGCTGGCATTGCTGCTCTGGCCCTTCA
ATGCCTACACTTGGTGCTTATGTTTTTGGGAAGATGGGGATGCTCAGTAG
CTGCAACCTCTGAAACTGTGGAAGTTCTCTCCATAAGTCTCCCTACAGGC
ATTGG
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